RNA–Protein interactions for RNA: ENST00000400771.7

ATG4B-202, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 663 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-202ENST00000400771 OR3A2P47893 321 aa13.7□□□□□ -0.22
ATG4B-202ENST00000400771 CLK1P49759 484 aaKnown RBP13.7□□□□□ -0.22
ATG4B-202ENST00000400771 SLC16A1P53985 500 aa13.7□□□□□ -0.22
ATG4B-202ENST00000400771 CSNK2A1P68400 391 aaPredicted RBP13.7□□□□□ -0.22
ATG4B-202ENST00000400771 H3F3AP84243 136 aa13.7□□□□□ -0.22
ATG4B-202ENST00000400771 RASGEF1BQ0VAM2 473 aa13.7□□□□□ -0.22
ATG4B-202ENST00000400771 RUNDC3AQ59EK9 446 aa13.7□□□□□ -0.22
ATG4B-202ENST00000400771 TMEM201Q5SNT2 666 aa13.7□□□□□ -0.22
ATG4B-202ENST00000400771 ANKRD34AQ69YU3 496 aa13.7□□□□□ -0.22
ATG4B-202ENST00000400771 GTF2IRD2BQ6EKJ0 949 aa13.7□□□□□ -0.22
ATG4B-202ENST00000400771 SPNS3Q6ZMD2 512 aa13.7□□□□□ -0.22
ATG4B-202ENST00000400771 BEND4Q6ZU67 534 aa13.7□□□□□ -0.22
ATG4B-202ENST00000400771 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.7□□□□□ -0.22
ATG4B-202ENST00000400771 GTF2IRD2Q86UP8 949 aa13.7□□□□□ -0.22
ATG4B-202ENST00000400771 TACO1Q9BSH4 297 aaKnown RBP13.7□□□□□ -0.22
ATG4B-202ENST00000400771 KLHL4Q9C0H6 718 aa13.7□□□□□ -0.22
ATG4B-202ENST00000400771 CXXC4Q9H2H0 198 aa13.7□□□□□ -0.22
ATG4B-202ENST00000400771 RABEP2Q9H5N1 569 aa13.7□□□□□ -0.22
ATG4B-202ENST00000400771 NDRG3Q9UGV2 375 aa13.7□□□□□ -0.22
ATG4B-202ENST00000400771 PRSS50Q9UI38 385 aa13.7□□□□□ -0.22
ATG4B-202ENST00000400771 FXYD1O00168 92 aa13.69□□□□□ -0.22
ATG4B-202ENST00000400771 NPIPB7O75200 414 aa13.69□□□□□ -0.22
ATG4B-202ENST00000400771 COX5AP20674 150 aa13.69□□□□□ -0.22
ATG4B-202ENST00000400771 HTR2AP28223 471 aa13.69□□□□□ -0.22
ATG4B-202ENST00000400771 PRKAR1BP31321 381 aa13.69□□□□□ -0.22
ATG4B-202ENST00000400771 PCBP3P57721 371 aaKnown RBP13.69□□□□□ -0.22
ATG4B-202ENST00000400771 MTPNP58546 118 aa13.69□□□□□ -0.22
ATG4B-202ENST00000400771 HOXC5Q00444 222 aa13.69□□□□□ -0.22
ATG4B-202ENST00000400771 CDK6Q00534 326 aa13.69□□□□□ -0.22
ATG4B-202ENST00000400771 GUCY1A3Q02108 690 aa13.69□□□□□ -0.22
ATG4B-202ENST00000400771 SCARB2Q14108 478 aa13.69□□□□□ -0.22
ATG4B-202ENST00000400771 LARS2Q15031 903 aaKnown RBP13.69□□□□□ -0.22
ATG4B-202ENST00000400771 PDK3Q15120 406 aa13.69□□□□□ -0.22
ATG4B-202ENST00000400771 TSC22D1Q15714 1073 aa13.69□□□□□ -0.22
ATG4B-202ENST00000400771 GLIPR1L2Q4G1C9 344 aa13.69□□□□□ -0.22
ATG4B-202ENST00000400771 ZNF311Q5JNZ3 666 aa13.69□□□□□ -0.22
ATG4B-202ENST00000400771 DHRS4L2Q6PKH6 230 aa13.69□□□□□ -0.22
ATG4B-202ENST00000400771 NET1Q7Z628 596 aaPredicted RBP13.69□□□□□ -0.22
ATG4B-202ENST00000400771 ATG4DQ86TL0 474 aaPredicted RBP13.69□□□□□ -0.22
ATG4B-202ENST00000400771 MTDHQ86UE4 582 aaKnown RBP13.69□□□□□ -0.22
ATG4B-202ENST00000400771 CXorf67Q86X51 503 aaPredicted RBP13.69□□□□□ -0.22
ATG4B-202ENST00000400771 TSPEARQ8WU66 669 aa13.69□□□□□ -0.22
ATG4B-202ENST00000400771 SLC35B4Q969S0 331 aa13.69□□□□□ -0.22
ATG4B-202ENST00000400771 ZC3HAV1LQ96H79 300 aaKnown RBP13.69□□□□□ -0.22
ATG4B-202ENST00000400771 ANKRD27Q96NW4 1050 aa13.69□□□□□ -0.22
ATG4B-202ENST00000400771 CGREF1Q99674 301 aa13.69□□□□□ -0.22
ATG4B-202ENST00000400771 ACTR6Q9GZN1 396 aa13.69□□□□□ -0.22
ATG4B-202ENST00000400771 OR10A4Q9H209 315 aa13.69□□□□□ -0.22
ATG4B-202ENST00000400771 CCM2LQ9NUG4 571 aaPredicted RBP13.69□□□□□ -0.22
ATG4B-202ENST00000400771 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.69□□□□□ -0.22
ATG4B-202ENST00000400771 TRIM33Q9UPN9 1127 aa13.69□□□□□ -0.22
ATG4B-202ENST00000400771 IFT52Q9Y366 437 aa13.69□□□□□ -0.22
ATG4B-202ENST00000400771 TMEM247A6NEH6 219 aa13.68□□□□□ -0.22
ATG4B-202ENST00000400771 KLF4O43474 513 aa13.68□□□□□ -0.22
ATG4B-202ENST00000400771 TPST1O60507 370 aa13.68□□□□□ -0.22
ATG4B-202ENST00000400771 FZD7O75084 574 aa13.68□□□□□ -0.22
ATG4B-202ENST00000400771 UQCRBP14927 111 aa13.68□□□□□ -0.22
ATG4B-202ENST00000400771 P2RY4P51582 365 aa13.68□□□□□ -0.22
ATG4B-202ENST00000400771 BNIP2Q12982 314 aa13.68□□□□□ -0.22
ATG4B-202ENST00000400771 ZSWIM7Q19AV6 140 aa13.68□□□□□ -0.22
ATG4B-202ENST00000400771 METTL21CQ5VZV1 264 aa13.68□□□□□ -0.22
ATG4B-202ENST00000400771 WBP2NLQ6ICG8 309 aa13.68□□□□□ -0.22
ATG4B-202ENST00000400771 REEP3Q6NUK4 255 aa13.68□□□□□ -0.22
ATG4B-202ENST00000400771 STK32CQ86UX6 486 aa13.68□□□□□ -0.22
ATG4B-202ENST00000400771 CCDC103Q8IW40 242 aa13.68□□□□□ -0.22
ATG4B-202ENST00000400771 CADM2Q8N3J6 435 aa13.68□□□□□ -0.22
ATG4B-202ENST00000400771 PIGXQ8TBF5 258 aa13.68□□□□□ -0.22
ATG4B-202ENST00000400771 S100PBPQ96BU1 408 aa13.68□□□□□ -0.22
ATG4B-202ENST00000400771 ZNF775Q96BV0 537 aaPredicted RBP13.68□□□□□ -0.22
ATG4B-202ENST00000400771 DDIT4LQ96D03 193 aa13.68□□□□□ -0.22
ATG4B-202ENST00000400771 WFDC6Q9BQY6 131 aa13.68□□□□□ -0.22
ATG4B-202ENST00000400771 ZNF226Q9NYT6 803 aa13.68□□□□□ -0.22
ATG4B-202ENST00000400771 TMEM181Q9P2C4 612 aa13.68□□□□□ -0.22
ATG4B-202ENST00000400771 CORO2BQ9UQ03 480 aa13.68□□□□□ -0.22
ATG4B-202ENST00000400771 TRAPPC4Q9Y296 219 aa13.68□□□□□ -0.22
ATG4B-202ENST00000400771 NDUFAF1Q9Y375 327 aa13.68□□□□□ -0.22
ATG4B-202ENST00000400771 UQCRHLA0A096LP55 91 aa13.67□□□□□ -0.22
ATG4B-202ENST00000400771 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.67□□□□□ -0.22
ATG4B-202ENST00000400771 LIPT2A6NK58 231 aa13.67□□□□□ -0.22
ATG4B-202ENST00000400771 ANGPT2O15123 496 aa13.67□□□□□ -0.22
ATG4B-202ENST00000400771 PPP3CBP16298 524 aa13.67□□□□□ -0.22
ATG4B-202ENST00000400771 FKBP2P26885 142 aaKnown RBP13.67□□□□□ -0.22
ATG4B-202ENST00000400771 GZMMP51124 257 aa13.67□□□□□ -0.22
ATG4B-202ENST00000400771 MAP2K6P52564 334 aa13.67□□□□□ -0.22
ATG4B-202ENST00000400771 ART1P52961 327 aa13.67□□□□□ -0.22
ATG4B-202ENST00000400771 EGR4Q05215 589 aa13.67□□□□□ -0.22
ATG4B-202ENST00000400771 SF3A3Q12874 501 aaKnown RBP eCLIP13.67□□□□□ -0.221e-6■■■■□ 19.3
ATG4B-202ENST00000400771 C6orf89Q6UWU4 347 aa13.67□□□□□ -0.22
ATG4B-202ENST00000400771 Q6ZT83 130 aa13.67□□□□□ -0.22
ATG4B-202ENST00000400771 C10orf82Q8WW14 230 aa13.67□□□□□ -0.22
ATG4B-202ENST00000400771 MBD6Q96DN6 1003 aa13.67□□□□□ -0.22
ATG4B-202ENST00000400771 PIK3IP1Q96FE7 263 aa13.67□□□□□ -0.22
ATG4B-202ENST00000400771 FOXC2Q99958 501 aa13.67□□□□□ -0.22
ATG4B-202ENST00000400771 PTDSS2Q9BVG9 487 aa13.67□□□□□ -0.22
ATG4B-202ENST00000400771 PRDM4Q9UKN5 801 aa13.67□□□□□ -0.22
ATG4B-202ENST00000400771 GPR52Q9Y2T5 361 aa13.67□□□□□ -0.22
ATG4B-202ENST00000400771 FLVCR1Q9Y5Y0 555 aa13.67□□□□□ -0.22
ATG4B-202ENST00000400771 C5orf58C9J3I9 102 aa13.66□□□□□ -0.22
ATG4B-202ENST00000400771 ADAP00813 363 aa13.66□□□□□ -0.22
ATG4B-202ENST00000400771 RAF1P04049 648 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms