RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 TRIM16LQ309B1 348 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 MAJINQ3KP22 176 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 FILIP1LQ4L180 1135 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 PDZK1Q5T2W1 519 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 CASC10Q5T4H9 136 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 PMF1Q6P1K2 205 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 ACOT7LQ6ZUV0 252 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 PRSS41Q7RTY9 318 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 CEND1Q8N111 149 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 C14orf178Q8N769 122 aaPredicted RBP1.94□□□□□ -2.1
CD47-203ENST00000398258 NKAPP1Q8N9T2 125 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 CCDC71LQ8N9Z2 235 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 BBS1Q8NFJ9 593 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 OR9A1PQ8NGU1 263 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 C7orf33Q8WU49 177 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 CHCHD10Q8WYQ3 142 aaPredicted RBP1.94□□□□□ -2.1
CD47-203ENST00000398258 OR1E3Q8WZA6 343 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 NEIL2Q969S2 332 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 SEC22AQ96IW7 307 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 MS4A14Q96JA4 679 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 SELENOIQ9C0D9 397 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 SGK2Q9HBY8 427 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 MARCH5Q9NX47 278 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 HYPKQ9NX55 129 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 ZNF639Q9UID6 485 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 PIGLQ9Y2B2 252 aa1.94□□□□□ -2.1
CD47-203ENST00000398258 CLSPNQ9HAW4 1339 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 IGKV1D-8A0A087WSZ0 117 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 IGHV1OR21-1A0A087WYE8 117 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 A0A1B0GUS0 222 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 OR52A4PA6NMU1 304 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 TMEM110-MUSTN1A8MSY1 372 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 A8MU10 97 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 TNFSF11O14788 317 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 TIMM8AO60220 97 aaPredicted RBP1.93□□□□□ -2.1
CD47-203ENST00000398258 LGI1O95970 557 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 TIMP1P01033 207 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 ALOX5P09917 674 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 OR8U8P0C7N1 319 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 ZNF853P0CG23 659 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 KLK2P20151 261 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 HOXD10P28358 340 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 GCAP28676 217 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 CALCRP30988 508 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 NTSP30990 170 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 CCR1P32246 355 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 RFC4P35249 363 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 TAGLN2P37802 199 aaKnown RBP1.93□□□□□ -2.1
CD47-203ENST00000398258 MAGEA8P43361 318 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 RGRP47804 291 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 DIO3P55073 304 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 CDH4P55283 916 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 RIPK4P57078 832 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 ZNF45Q02386 682 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 BCL2L1Q07817 233 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 ZNF763Q0D2J5 394 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 DDX39BQ13838 428 aaKnown RBP1.93□□□□□ -2.1
CD47-203ENST00000398258 IDI1Q13907 227 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 KLHL38Q2WGJ6 581 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 NSUN5P1Q3KNT7 163 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 RABL6Q3YEC7 729 aaPredicted RBP1.93□□□□□ -2.1
CD47-203ENST00000398258 CCDC14Q49A88 953 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 CARD16Q5EG05 197 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 C6orf226Q5I0X4 101 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 CTSL3PQ5NE16 218 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 OR2G6Q5TZ20 316 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 SCARA5Q6ZMJ2 495 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 H2BFWTQ7Z2G1 175 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 HSD17B13Q7Z5P4 300 aaPredicted RBP1.93□□□□□ -2.1
CD47-203ENST00000398258 DHDDSQ86SQ9 333 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 SLC35F2Q8IXU6 374 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 ZBED8Q8IZ13 594 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 MTURNQ8N3F0 131 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 OR10H4Q8NGA5 316 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 MAGEE2Q8TD90 523 aaPredicted RBP1.93□□□□□ -2.1
CD47-203ENST00000398258 ST8SIA1Q92185 356 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 SERAC1Q96JX3 654 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 PGLYRP4Q96LB8 373 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 RPRD1AQ96P16 312 aaPredicted RBP1.93□□□□□ -2.1
CD47-203ENST00000398258 OXGR1Q96P68 337 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 RBM14Q96PK6 669 aaKnown RBP1.93□□□□□ -2.1
CD47-203ENST00000398258 TECTBQ96PL2 329 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 HIST1H4GQ99525 98 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 C20orf85Q9H1P6 137 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 SUDS3Q9H7L9 328 aaPredicted RBP1.93□□□□□ -2.1
CD47-203ENST00000398258 NHEJ1Q9H9Q4 299 aaPredicted RBP1.93□□□□□ -2.1
CD47-203ENST00000398258 SH2D2AQ9NP31 389 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 HPCAL4Q9UM19 191 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 UBQLN1Q9UMX0 589 aaKnown RBP1.93□□□□□ -2.1
CD47-203ENST00000398258 IFT52Q9Y366 437 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 TNRQ92752 1358 aa1.93□□□□□ -2.1
CD47-203ENST00000398258 XKRY2A2RUG3 117 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 KRTAP4-16G5E9R7 235 aaPredicted RBP1.92□□□□□ -2.1
CD47-203ENST00000398258 H0Y8G0 127 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 GFYI3L273 518 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 HSD17B6O14756 317 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 DIRAS1O95057 198 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 SNX4O95219 450 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 SNAPINO95295 136 aa1.92□□□□□ -2.1
CD47-203ENST00000398258 LY6G6DO95868 133 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms