RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 XKR7Q5GH72 579 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 QSOX2Q6ZRP7 698 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 GLT6D1Q7Z4J2 308 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 ADCK2Q7Z695 626 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 DNAJC22Q8N4W6 341 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 OR13C5Q8NGS8 318 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 OR51A7Q8NH64 312 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 CMKLR1Q99788 373 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 FNDC11Q9BVV2 318 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 SRRQ9GZT4 340 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 REEP4Q9H6H4 257 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 ACTR8Q9H981 624 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 NUDT4Q9NZJ9 180 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 ERRFI1Q9UJM3 462 aaPredicted RBP6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 PCTPQ9UKL6 214 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 PKP3Q9Y446 797 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 FITM1A5D6W6 292 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 SAGE2PA6NJ88 616 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 DNASE2O00115 360 aaPredicted RBP6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 LEFTY1O75610 366 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 OR4F21O95013 312 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 IGF2P01344 180 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 CEACAM1P13688 526 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 GGT1P19440 569 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 HRH2P25021 359 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 DPP4P27487 766 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 LSSP48449 732 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 NR0B1P51843 470 aaKnown RBP6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 DHODHQ02127 395 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 NDUFA9Q16795 377 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 MICBQ29980 383 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 Q5BKY6 102 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 C9orf50Q5SZB4 431 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 TMPRSS7Q7RTY8 843 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 GDF7Q7Z4P5 450 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 DTWD1Q8N5C7 304 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 PNPLA1Q8N8W4 532 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 BEND2Q8NDZ0 799 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 OR5T3Q8NGG3 340 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 OR51L1Q8NGJ5 315 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 OR5K1Q8NHB7 308 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 ARRDC2Q8TBH0 407 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 TCTEX1D2Q8WW35 142 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 DEDD2Q8WXF8 326 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 ACOT11Q8WXI4 607 aaPredicted RBP6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 EGLN1Q9GZT9 426 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 OR10A5Q9H207 317 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 HEBP1Q9NRV9 189 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 C14orf105Q9NVL8 296 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 LYARQ9NX58 379 aaKnown RBP6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 ZNF223Q9UK11 482 aaPredicted RBP6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 NPTNQ9Y639 398 aa6.11□□□□□ -1.43
TM9SF4-202ENST00000398022 CDRT15L2A8MXV6 281 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 ZNF99A8MXY4 864 aaPredicted RBP6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 AGRPO00253 132 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 BTN3A3O00478 584 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 CHRM2P08172 466 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 CCNYL3P0C7X3 344 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 PIRTP0C851 137 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 IL7RP16871 459 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 ACP1P24666 158 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 RBM34P42696 430 aaKnown RBP6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 TUSC3Q13454 348 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 MS4A13Q5J8X5 152 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 KIAA1211LQ6NV74 962 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 CDPF1Q6NVV7 123 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 RIMKLAQ8IXN7 391 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 FAM46DQ8NEK8 389 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 DMBX1Q8NFW5 382 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 CCDC115Q96NT0 180 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 COL21A1Q96P44 957 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 DGAT2Q96PD7 388 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 TRIB1Q96RU8 372 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 ACOX2Q99424 681 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 STACQ99469 402 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 FUNDC2Q9BWH2 189 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 DPY30Q9C005 99 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 ELOVL6Q9H5J4 265 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 NLE1Q9NVX2 485 aaPredicted RBP6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 USE1Q9NZ43 259 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 SCML2Q9UQR0 700 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 TRBV2A0A0J9YWF9 115 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 MEIS3P2A8K0S8 358 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 ACOT7O00154 380 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 RGS14O43566 566 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 KHDRBS3O75525 346 aaKnown RBP6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 AQP8O94778 261 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 MYOGP15173 224 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 IL12AP29459 219 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 RGS4P49798 205 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 CDH11P55287 796 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 RAP1AP62834 184 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 PLAURQ03405 335 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 PCK2Q16822 640 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 RNF151Q2KHN1 245 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 C5orf47Q569G3 176 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 CLLU1Q5K131 121 aa6.1□□□□□ -1.43
TM9SF4-202ENST00000398022 TMEM88Q6PEY1 159 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms