RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 TMEM44Q2T9K0 475 aa17.64■□□□□ 0.41
PDLIM2-205ENST00000397761 CTU2Q2VPK5 515 aaKnown RBP17.64■□□□□ 0.41
PDLIM2-205ENST00000397761 LAIR2Q6ISS4 152 aa17.64■□□□□ 0.41
PDLIM2-205ENST00000397761 MDS2Q8NDY4 140 aa17.64■□□□□ 0.41
PDLIM2-205ENST00000397761 OR1J4Q8NGS1 313 aa17.64■□□□□ 0.41
PDLIM2-205ENST00000397761 ZBTB8AQ96BR9 441 aa17.64■□□□□ 0.41
PDLIM2-205ENST00000397761 SIGLEC12Q96PQ1 595 aa17.64■□□□□ 0.41
PDLIM2-205ENST00000397761 DEPPQ9NTK1 212 aa17.64■□□□□ 0.41
PDLIM2-205ENST00000397761 MED12Q93074 2177 aa17.64■□□□□ 0.41
PDLIM2-205ENST00000397761 USP24Q9UPU5 2620 aa17.64■□□□□ 0.41
PDLIM2-205ENST00000397761 TRIM64A6NGJ6 449 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 ZNF208O43345 1280 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 CBR3O75828 277 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 OR7A10O76100 309 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 RCBTB2O95199 551 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 SAGP10523 405 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 GABRB1P18505 474 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 FUT1P19526 365 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 CNR1P21554 472 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 EIF1P41567 113 aaKnown RBP17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 TPD52P55327 224 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 RPS4XP62701 263 aaKnown RBP17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 TEKQ02763 1124 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 GINS1Q14691 196 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 OR1C1Q15619 314 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 TMEM236Q5W0B7 351 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 SPINK14Q6IE38 97 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 IGFL2Q6UWQ7 119 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 LINC00696Q6ZRV3 163 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 ENTHD1Q8IYW4 607 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 DEPDC4Q8N2C3 294 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 OR13C2Q8NGS9 318 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 OR6S1Q8NH40 331 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 RHOXF1Q8NHV9 184 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 TEX47Q8TBZ9 253 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 HAS2Q92819 552 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 KTI12Q96EK9 354 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 YTHDF1Q9BYJ9 559 aaKnown RBP17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 OR52D1Q9H346 318 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 ZNF696Q9H7X3 374 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 CHRNA9Q9UGM1 479 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 VDAC3Q9Y277 283 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 ZFHX4Q86UP3 3567 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 TRAV36DV7A0A075B6V5 113 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 MAGEA13PA6NCF6 341 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 OR5H15A6NDH6 313 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 LRRC3CA6NJW4 275 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 G3V3Y1 287 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 EFNA2O43921 213 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 HCN1O60741 890 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 SLC25A12O75746 678 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 TNFAIP8O95379 198 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 TSPAN19P0C672 248 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 MASP1P48740 699 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 DNASE1L1P49184 302 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 SMSP52788 366 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 DSCR4P56555 118 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 CDC42P60953 191 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 EFNB1P98172 346 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 FOXO1Q12778 655 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 CDK5R2Q13319 367 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 ZBED5Q49AG3 693 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 SLC27A4Q6P1M0 643 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 OAFQ86UD1 273 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 GTPBP8Q8N3Z3 284 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 FAM81AQ8TBF8 368 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 FANK1Q8TC84 345 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 HDAC2Q92769 488 aaKnown RBP17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 TAAR8Q969N4 342 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 PTDSS2Q9BVG9 487 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 UBQLN3Q9H347 655 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 ZNF226Q9NYT6 803 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 RNF6Q9Y252 685 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 MRPS18CQ9Y3D5 142 aaKnown RBP17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 ZNF337Q9Y3M9 751 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 KCNMB2Q9Y691 235 aa17.63■□□□□ 0.41
PDLIM2-205ENST00000397761 ANKRD11Q6UB99 2663 aaPredicted RBP17.62■□□□□ 0.41
PDLIM2-205ENST00000397761 ZC3H12DA2A288 527 aaKnown RBP17.62■□□□□ 0.41
PDLIM2-205ENST00000397761 A6NL46 340 aa17.62■□□□□ 0.41
PDLIM2-205ENST00000397761 FAM47E-STBD1D6RA91 191 aa17.62■□□□□ 0.41
PDLIM2-205ENST00000397761 FZD7O75084 574 aa17.62■□□□□ 0.41
PDLIM2-205ENST00000397761 WBP4O75554 376 aaKnown RBP17.62■□□□□ 0.41
PDLIM2-205ENST00000397761 CH25HO95992 272 aa17.62■□□□□ 0.41
PDLIM2-205ENST00000397761 BGLAPP02818 100 aa17.62■□□□□ 0.41
PDLIM2-205ENST00000397761 ASAH2BP0C7U1 165 aa17.62■□□□□ 0.41
PDLIM2-205ENST00000397761 IL5RAQ01344 420 aa17.62■□□□□ 0.41
PDLIM2-205ENST00000397761 LTBQ06643 244 aa17.62■□□□□ 0.41
PDLIM2-205ENST00000397761 ANKDD1AQ495B1 522 aa17.62■□□□□ 0.41
PDLIM2-205ENST00000397761 GLYR1Q49A26 553 aaPredicted RBP17.62■□□□□ 0.41
PDLIM2-205ENST00000397761 C6orf141Q5SZD1 244 aa17.62■□□□□ 0.41
PDLIM2-205ENST00000397761 ACSM5Q6NUN0 579 aa17.62■□□□□ 0.41
PDLIM2-205ENST00000397761 SMARCD3Q6STE5 483 aa17.62■□□□□ 0.41
PDLIM2-205ENST00000397761 TRUB1Q8WWH5 349 aaKnown RBP17.62■□□□□ 0.41
PDLIM2-205ENST00000397761 UBE2FQ969M7 185 aa17.62■□□□□ 0.41
PDLIM2-205ENST00000397761 CNTNAP3BQ96NU0 1288 aa17.62■□□□□ 0.41
PDLIM2-205ENST00000397761 GNRHR2Q96P88 292 aa17.62■□□□□ 0.41
PDLIM2-205ENST00000397761 MOGAT1Q96PD6 335 aa17.62■□□□□ 0.41
PDLIM2-205ENST00000397761 FAM173AQ9BQD7 235 aa17.62■□□□□ 0.41
PDLIM2-205ENST00000397761 CNTNAP3Q9BZ76 1288 aa17.62■□□□□ 0.41
PDLIM2-205ENST00000397761 FKRPQ9H9S5 495 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms