RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 FOXC1Q12948 553 aa17.66■□□□□ 0.42
PDLIM2-204ENST00000397760 CD226Q15762 336 aa17.66■□□□□ 0.42
PDLIM2-204ENST00000397760 LYPD8Q6UX82 237 aa17.66■□□□□ 0.42
PDLIM2-204ENST00000397760 PLEKHM3Q6ZWE6 761 aa17.66■□□□□ 0.42
PDLIM2-204ENST00000397760 PARP16Q8N5Y8 322 aa17.66■□□□□ 0.42
PDLIM2-204ENST00000397760 PHOSPHO1Q8TCT1 267 aa17.66■□□□□ 0.42
PDLIM2-204ENST00000397760 IP6K3Q96PC2 410 aa17.66■□□□□ 0.42
PDLIM2-204ENST00000397760 MND1Q9BWT6 205 aa17.66■□□□□ 0.42
PDLIM2-204ENST00000397760 TBL1XR1Q9BZK7 514 aa17.66■□□□□ 0.42
PDLIM2-204ENST00000397760 POLR2J3Q9H1A7 115 aaKnown RBP17.66■□□□□ 0.42
PDLIM2-204ENST00000397760 CDCP1Q9H5V8 836 aa17.66■□□□□ 0.42
PDLIM2-204ENST00000397760 ZNF229Q9UJW7 825 aa17.66■□□□□ 0.42
PDLIM2-204ENST00000397760 LSM2Q9Y333 95 aaKnown RBP17.66■□□□□ 0.42
PDLIM2-204ENST00000397760 GTPBP1O00178 669 aaKnown RBP17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 OR10H3O60404 316 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 ATP6V1G1O75348 118 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 SERPINA7P05543 415 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 HSMCR30P0CW71 290 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 IFNA8P32881 189 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 TSTQ16762 297 aaKnown RBP17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 NDUFAF6Q330K2 333 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 STEAP3Q658P3 488 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 FCRLBQ6BAA4 426 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 PGBD2Q6P3X8 592 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 ZNF550Q7Z398 422 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 RPS19BP1Q86WX3 136 aaKnown RBP17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 SNX29P2Q8IUI4 249 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 FAM26EQ8N5C1 309 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 POGLUT1Q8NBL1 392 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 PROKR2Q8NFJ6 384 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 CHAC2Q8WUX2 184 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 HGDQ93099 445 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 SLC35B4Q969S0 331 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 TMCO6Q96DC7 493 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 NXPE2Q96DL1 559 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 OR5M11Q96RB7 305 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 CCDC32Q9BV29 185 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 ABCB10Q9NRK6 738 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 SEC14L4Q9UDX3 406 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 TESQ9UGI8 421 aaKnown RBP17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 KLK13Q9UKR3 277 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 YARS2Q9Y2Z4 477 aaKnown RBP17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 A0A1W2PQD3 144 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 ALG1L2C9J202 215 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 FADS1O60427 444 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 FMO6PO60774 539 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 ENTPD6O75354 484 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 FBXO45P0C2W1 286 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 UBL4AP11441 157 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 POU1F1P28069 291 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 EVI2BP34910 448 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 EIF2B2P49770 351 aaKnown RBP17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 DEFA1P59665 94 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 DEFA3P59666 94 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 SEC23BQ15437 767 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 SPANXN2Q5MJ10 180 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 NUP54Q7Z3B4 507 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 MARCH3Q86UD3 253 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 CCDC190Q86UF4 302 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 VASH2Q86V25 355 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 ARSGQ96EG1 525 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 TXNDC15Q96J42 360 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 OPALINQ96PE5 141 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 POLDIP3Q9BY77 421 aaKnown RBP17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 TRAPPC4Q9Y296 219 aa17.65■□□□□ 0.42
PDLIM2-204ENST00000397760 NDUFB5O43674 189 aa17.64■□□□□ 0.41
PDLIM2-204ENST00000397760 HTR2AP28223 471 aa17.64■□□□□ 0.41
PDLIM2-204ENST00000397760 ACAA2P42765 397 aaKnown RBP17.64■□□□□ 0.41
PDLIM2-204ENST00000397760 COPZ1P61923 177 aa17.64■□□□□ 0.41
PDLIM2-204ENST00000397760 CHAF1BQ13112 559 aa17.64■□□□□ 0.41
PDLIM2-204ENST00000397760 OR1Q1Q15612 314 aa17.64■□□□□ 0.41
PDLIM2-204ENST00000397760 SSX1Q16384 188 aa17.64■□□□□ 0.41
PDLIM2-204ENST00000397760 CYP4Z2PQ8N1L4 340 aa17.64■□□□□ 0.41
PDLIM2-204ENST00000397760 FAM71CQ8NEG0 241 aa17.64■□□□□ 0.41
PDLIM2-204ENST00000397760 TTC9Q92623 222 aa17.64■□□□□ 0.41
PDLIM2-204ENST00000397760 SLC41A3Q96GZ6 507 aa17.64■□□□□ 0.41
PDLIM2-204ENST00000397760 ZNF559Q9BR84 538 aa17.64■□□□□ 0.41
PDLIM2-204ENST00000397760 RTN4RQ9BZR6 473 aa17.64■□□□□ 0.41
PDLIM2-204ENST00000397760 IRGMA1A4Y4 181 aa17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 M0R129 80 aa17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 TBX1O43435 398 aa17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 ADAM11O75078 769 aa17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 OR5F1O95221 314 aa17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 GSTM3P21266 225 aa17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 SOX3P41225 446 aa17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 MLF1P58340 268 aa17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 ST3GAL3Q11203 375 aa17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 C1DQ13901 141 aaKnown RBP17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 SPHARQ15513 63 aa17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 ZNF440Q8IYI8 595 aa17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 ARMC10Q8N2F6 343 aa17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 POC5Q8NA72 575 aa17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 GRHL3Q8TE85 626 aa17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 SPACA9Q96E40 222 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 POLR2J2Q9GZM3 115 aaKnown RBP17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 NUAK2Q9H093 628 aa17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 TMEM27Q9HBJ8 222 aa17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 MAN2C1Q9NTJ4 1040 aa17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 CARD8Q9Y2G2 431 aa17.63■□□□□ 0.41
PDLIM2-204ENST00000397760 PCDHGB6Q9Y5F9 930 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms