RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 RDH16O75452 317 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 DDAH2O95865 285 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 IFI30P13284 250 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 ZNF17P17021 662 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 TNNI3P19429 210 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 UQCRC1P31930 480 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 EVI2BP34910 448 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 CDH15P55291 814 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 CXXC5Q7LFL8 322 aaKnown RBP5.38□□□□□ -1.55
PTPRD-206ENST00000397617 SSX8Q7RTT4 187 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 PPP1R3BQ86XI6 285 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 RCBTB1Q8NDN9 531 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 MFSD8Q8NHS3 518 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 LIN37Q96GY3 246 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-206ENST00000397617 OPALINQ96PE5 141 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 DDOQ99489 341 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 DDA1Q9BW61 102 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 GPR87Q9BY21 358 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 PTGES2Q9H7Z7 377 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 UCKL1Q9NWZ5 548 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 TAS2R8Q9NYW2 309 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 PILRBQ9UKJ0 227 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 FEZF1A0PJY2 475 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 PDCD5O14737 125 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 MITFO75030 526 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-206ENST00000397617 FBXO45P0C2W1 286 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 C21orf33P30042 268 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-206ENST00000397617 TGFBR2P37173 567 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 TRIM16LQ309B1 348 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 ZNF385CQ66K41 422 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-206ENST00000397617 ZC3H14Q6PJT7 736 aaKnown RBP5.38□□□□□ -1.55
PTPRD-206ENST00000397617 OAFQ86UD1 273 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 SLCO6A1Q86UG4 719 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 TAS2R10Q9NYW0 307 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 CNIH4Q9P003 139 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 MBD2Q9UBB5 411 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 ICE1Q9Y2F5 2266 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 NR4A1P22736 598 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 GSK3AP49840 483 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 DCDP81605 110 aaKnown RBP5.38□□□□□ -1.55
PTPRD-206ENST00000397617 DYRK1AQ13627 763 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 UBXN2BQ14CS0 331 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 ANGPT1Q15389 498 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 MRPL14Q6P1L8 145 aaKnown RBP5.38□□□□□ -1.55
PTPRD-206ENST00000397617 ARIH2OSQ8N7S6 290 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 OR2Y1Q8NGV0 311 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 OR51Q1Q8NH59 317 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 RNF32Q9H0A6 362 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 ERVK-18Q9QC07 812 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 PPM1DO15297 605 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 FMO3P31513 532 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 LSSP48449 732 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 ZFP36L1Q07352 338 aaKnown RBP5.38□□□□□ -1.55
PTPRD-206ENST00000397617 ZNF322Q6U7Q0 402 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-206ENST00000397617 GLRX5Q86SX6 157 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 OR9Q2Q8NGE9 314 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 TSACCQ96A04 125 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-206ENST00000397617 ADIPOR1Q96A54 375 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 RADILQ96JH8 1075 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 TBL1XR1Q9BZK7 514 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 FAM60AQ9NP50 221 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 RCE1Q9Y256 329 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 PRKAB1Q9Y478 270 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 CFAP20Q9Y6A4 193 aaKnown RBP5.38□□□□□ -1.55
PTPRD-206ENST00000397617 GJE1A6NN92 205 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 OGG1O15527 345 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 TMCC2O75069 709 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 GLCEO94923 617 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 UBL3O95164 117 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 ZIC2O95409 532 aaPredicted RBP5.38□□□□□ -1.55
PTPRD-206ENST00000397617 CLIC3O95833 236 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 EML2O95834 649 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 SDHAP31040 664 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 FEN1P39748 380 aaKnown RBP5.38□□□□□ -1.55
PTPRD-206ENST00000397617 SOX8P57073 446 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 KLHL15Q96M94 604 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 CNN2Q99439 309 aaKnown RBP5.38□□□□□ -1.55
PTPRD-206ENST00000397617 BARD1Q99728 777 aaKnown RBP5.38□□□□□ -1.55
PTPRD-206ENST00000397617 SLC7A7Q9UM01 511 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 SF3B6Q9Y3B4 125 aaKnown RBP5.38□□□□□ -1.55
PTPRD-206ENST00000397617 V9GYQ6 96 aa5.38□□□□□ -1.55
PTPRD-206ENST00000397617 C4orf51C9J302 202 aa5.37□□□□□ -1.55
PTPRD-206ENST00000397617 H0Y8X5 98 aa5.37□□□□□ -1.55
PTPRD-206ENST00000397617 M0R3H8 397 aa5.37□□□□□ -1.55
PTPRD-206ENST00000397617 ARHGAP33O14559 1287 aa5.37□□□□□ -1.55
PTPRD-206ENST00000397617 TLX3O43711 291 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-206ENST00000397617 GBAP04062 536 aa5.37□□□□□ -1.55
PTPRD-206ENST00000397617 ERCC1P07992 297 aaPredicted RBP5.37□□□□□ -1.55
PTPRD-206ENST00000397617 PRKACGP22612 351 aa5.37□□□□□ -1.55
PTPRD-206ENST00000397617 LIPAP38571 399 aa5.37□□□□□ -1.55
PTPRD-206ENST00000397617 SELENBP1Q13228 472 aa5.37□□□□□ -1.55
PTPRD-206ENST00000397617 SLC30A6Q6NXT4 461 aa5.37□□□□□ -1.55
PTPRD-206ENST00000397617 ZNF417Q8TAU3 575 aa5.37□□□□□ -1.55
PTPRD-206ENST00000397617 CNIH3Q8TBE1 160 aa5.37□□□□□ -1.55
PTPRD-206ENST00000397617 SERINC1Q9NRX5 453 aa5.37□□□□□ -1.55
PTPRD-206ENST00000397617 PKDREJQ9NTG1 2253 aa5.37□□□□□ -1.55
PTPRD-206ENST00000397617 SAP18O00422 153 aaKnown RBP5.37□□□□□ -1.55
PTPRD-206ENST00000397617 ATE1O95260 518 aa5.37□□□□□ -1.55
PTPRD-206ENST00000397617 ACP1P24666 158 aa5.37□□□□□ -1.55
PTPRD-206ENST00000397617 GABRA3P34903 492 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 665.8 ms