RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 FUT5Q11128 374 aa4.66□□□□□ -1.66
SSR1-202ENST00000397511 SERTAD2Q14140 314 aa4.66□□□□□ -1.66
SSR1-202ENST00000397511 SLC9A5Q14940 896 aa4.66□□□□□ -1.66
SSR1-202ENST00000397511 TANGO2Q6ICL3 276 aa4.66□□□□□ -1.66
SSR1-202ENST00000397511 TMEM88Q6PEY1 159 aa4.66□□□□□ -1.66
SSR1-202ENST00000397511 VITQ6UXI7 678 aa4.66□□□□□ -1.66
SSR1-202ENST00000397511 IL20RBQ6UXL0 311 aa4.66□□□□□ -1.66
SSR1-202ENST00000397511 SLITRK4Q8IW52 837 aa4.66□□□□□ -1.66
SSR1-202ENST00000397511 SVBPQ8N300 66 aa4.66□□□□□ -1.66
SSR1-202ENST00000397511 TOMM5Q8N4H5 51 aa4.66□□□□□ -1.66
SSR1-202ENST00000397511 ACOT4Q8N9L9 421 aa4.66□□□□□ -1.66
SSR1-202ENST00000397511 SLC16A11Q8NCK7 471 aa4.66□□□□□ -1.66
SSR1-202ENST00000397511 PXT1Q8NFP0 134 aa4.66□□□□□ -1.66
SSR1-202ENST00000397511 BEST4Q8NFU0 473 aa4.66□□□□□ -1.66
SSR1-202ENST00000397511 OR8J1Q8NGP2 316 aa4.66□□□□□ -1.66
SSR1-202ENST00000397511 OR2A1Q8NGT9 310 aa4.66□□□□□ -1.66
SSR1-202ENST00000397511 OR10G6Q8NH81 332 aa4.66□□□□□ -1.66
SSR1-202ENST00000397511 CCL4L1Q8NHW4 92 aa4.66□□□□□ -1.66
SSR1-202ENST00000397511 APOBEC4Q8WW27 367 aaKnown RBP4.66□□□□□ -1.66
SSR1-202ENST00000397511 CNOT9Q92600 299 aaKnown RBP4.66□□□□□ -1.66
SSR1-202ENST00000397511 RNFT2Q96EX2 444 aa4.66□□□□□ -1.66
SSR1-202ENST00000397511 PPP1R16AQ96I34 528 aa4.66□□□□□ -1.66
SSR1-202ENST00000397511 RNF32Q9H0A6 362 aa4.66□□□□□ -1.66
SSR1-202ENST00000397511 DPEP2Q9H4A9 486 aa4.66□□□□□ -1.66
SSR1-202ENST00000397511 WDR26Q9H7D7 661 aa4.66□□□□□ -1.66
SSR1-202ENST00000397511 NEUROD4Q9HD90 331 aa4.66□□□□□ -1.66
SSR1-202ENST00000397511 MRPS30Q9NP92 439 aaKnown RBP4.66□□□□□ -1.66
SSR1-202ENST00000397511 PRSS16Q9NQE7 514 aa4.66□□□□□ -1.66
SSR1-202ENST00000397511 SEMA4GQ9NTN9 838 aa4.66□□□□□ -1.66
SSR1-202ENST00000397511 TMEM74BQ9NUR3 256 aa4.66□□□□□ -1.66
SSR1-202ENST00000397511 TAS2R3Q9NYW6 316 aa4.66□□□□□ -1.66
SSR1-202ENST00000397511 ARHGEF17Q96PE2 2063 aaPredicted RBP4.65□□□□□ -1.66
SSR1-202ENST00000397511 KIAA1549LQ6ZVL6 1849 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 TBC1D3DA0A087WVF3 549 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 TBC1D3IA0A087WXS9 549 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 TBC1D3EA0A087X179 549 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 TBC1D3KA0A087X1G2 549 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 CENPVL1A0A0U1RR11 272 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 A0A1B0GTQ1 180 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 TBC1D3FA6NER0 549 aaPredicted RBP4.65□□□□□ -1.66
SSR1-202ENST00000397511 TBC1D3LB9A6J9 549 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 MCRIP1C9JLW8 97 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 G3V3Q6 166 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 LANCL1O43813 399 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 PRAMEF2O60811 474 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 RAB36O95755 333 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 AIFM1O95831 613 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 EML2O95834 649 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 HPP00738 406 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 SERPINA3P01011 423 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 SRPRAP08240 638 aaKnown RBP4.65□□□□□ -1.66
SSR1-202ENST00000397511 MRPL3P09001 348 aaKnown RBP4.65□□□□□ -1.66
SSR1-202ENST00000397511 TBC1D3HP0C7X1 549 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 DRD2P14416 443 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 SPI1P17947 270 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 ELK1P19419 428 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 RBMS1P29558 406 aaKnown RBP4.65□□□□□ -1.66
SSR1-202ENST00000397511 FGF9P31371 208 aaPredicted RBP4.65□□□□□ -1.66
SSR1-202ENST00000397511 GABRA5P31644 462 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 DRD3P35462 400 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 CD96P40200 585 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 PITPNBP48739 271 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 FNTBP49356 437 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 TAS2R38P59533 333 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 ZP1P60852 638 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 RAB5BP61020 215 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 SIM1P81133 766 aaPredicted RBP4.65□□□□□ -1.66
SSR1-202ENST00000397511 ILKQ13418 452 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 IRF4Q15306 451 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 DEFB134Q4QY38 66 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 SFRP5Q5T4F7 317 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 METRNLQ641Q3 311 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 TBC1D3GQ6DHY5 549 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 TBC1D3CQ6IPX1 549 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 LYPD4Q6UWN0 246 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 BTN2A1Q7KYR7 527 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 ZNF761Q86XN6 746 aaPredicted RBP4.65□□□□□ -1.66
SSR1-202ENST00000397511 SFTPA2Q8IWL1 248 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 NRMQ8IXM6 262 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 NRSN1Q8IZ57 195 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 TBC1D3Q8IZP1 549 aaPredicted RBP4.65□□□□□ -1.66
SSR1-202ENST00000397511 ZNF527Q8NB42 609 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 BPIFCQ8NFQ6 507 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 OR52E1Q8NGJ3 308 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 OR51G2Q8NGK0 314 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 OR56B4Q8NH76 319 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 PHOSPHO2Q8TCD6 241 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 TMEM255BQ8WV15 326 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 ZNF707Q96C28 371 aaPredicted RBP4.65□□□□□ -1.66
SSR1-202ENST00000397511 DNAJA3Q96EY1 480 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 LRIG1Q96JA1 1093 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 ZNF582Q96NG8 517 aaPredicted RBP4.65□□□□□ -1.66
SSR1-202ENST00000397511 UBL7Q96S82 380 aaPredicted RBP4.65□□□□□ -1.66
SSR1-202ENST00000397511 KXD1Q9BQD3 176 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 RPP25Q9BUL9 199 aaKnown RBP4.65□□□□□ -1.66
SSR1-202ENST00000397511 SLC25A32Q9H2D1 315 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 ZNF275Q9NSD4 429 aaPredicted RBP4.65□□□□□ -1.66
SSR1-202ENST00000397511 MAN2C1Q9NTJ4 1040 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 C14orf105Q9NVL8 296 aa4.65□□□□□ -1.66
SSR1-202ENST00000397511 GPR34Q9UPC5 381 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms