RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 ATP6AP1Q15904 470 aa21.25■□□□□ 0.99
TSPAN4-203ENST00000397397 GFRALQ6UXV0 394 aa21.25■□□□□ 0.99
TSPAN4-203ENST00000397397 TMEM239Q8WW34 195 aa21.25■□□□□ 0.99
TSPAN4-203ENST00000397397 KLHL15Q96M94 604 aa21.25■□□□□ 0.99
TSPAN4-203ENST00000397397 OR5B2Q96R09 309 aa21.25■□□□□ 0.99
TSPAN4-203ENST00000397397 TMEM43Q9BTV4 400 aa21.25■□□□□ 0.99
TSPAN4-203ENST00000397397 ZNF426Q9BUY5 554 aa21.25■□□□□ 0.99
TSPAN4-203ENST00000397397 SAMHD1Q9Y3Z3 626 aaKnown RBP21.25■□□□□ 0.99
TSPAN4-203ENST00000397397 LYVE1Q9Y5Y7 322 aa21.25■□□□□ 0.99
TSPAN4-203ENST00000397397 MPDZO75970 2070 aa21.24■□□□□ 0.99
TSPAN4-203ENST00000397397 KPNA4O00629 521 aaPredicted RBP21.24■□□□□ 0.99
TSPAN4-203ENST00000397397 EDN3P14138 238 aa21.24■□□□□ 0.99
TSPAN4-203ENST00000397397 CLK1P49759 484 aaKnown RBP21.24■□□□□ 0.99
TSPAN4-203ENST00000397397 UGT2B15P54855 530 aa21.24■□□□□ 0.99
TSPAN4-203ENST00000397397 CLDN18P56856 261 aa21.24■□□□□ 0.99
TSPAN4-203ENST00000397397 SRYQ05066 204 aa21.24■□□□□ 0.99
TSPAN4-203ENST00000397397 EGR4Q05215 589 aa21.24■□□□□ 0.99
TSPAN4-203ENST00000397397 PPP1R8Q12972 351 aaKnown RBP21.24■□□□□ 0.99
TSPAN4-203ENST00000397397 BCL2A1Q16548 175 aa21.24■□□□□ 0.99
TSPAN4-203ENST00000397397 EXOC3L2Q2M3D2 409 aa21.24■□□□□ 0.99
TSPAN4-203ENST00000397397 PODNL1Q6PEZ8 512 aa21.24■□□□□ 0.99
TSPAN4-203ENST00000397397 ZNF730Q6ZMV8 503 aa21.24■□□□□ 0.99
TSPAN4-203ENST00000397397 FGD2Q7Z6J4 655 aa21.24■□□□□ 0.99
TSPAN4-203ENST00000397397 MEIOBQ8N635 442 aa21.24■□□□□ 0.99
TSPAN4-203ENST00000397397 SLC7A13Q8TCU3 470 aa21.24■□□□□ 0.99
TSPAN4-203ENST00000397397 ACOT11Q8WXI4 607 aaPredicted RBP21.24■□□□□ 0.99
TSPAN4-203ENST00000397397 DNAJA3Q96EY1 480 aa21.24■□□□□ 0.99
TSPAN4-203ENST00000397397 ALPK1Q96QP1 1244 aa21.24■□□□□ 0.99
TSPAN4-203ENST00000397397 TMCC3Q9ULS5 477 aa21.24■□□□□ 0.99
TSPAN4-203ENST00000397397 CAMK2AQ9UQM7 478 aa21.24■□□□□ 0.99
TSPAN4-203ENST00000397397 U3KQV3 271 aa21.24■□□□□ 0.99
TSPAN4-203ENST00000397397 SPTA1P02549 2419 aa21.24■□□□□ 0.99
TSPAN4-203ENST00000397397 A0A087WUU8 490 aa21.23■□□□□ 0.99
TSPAN4-203ENST00000397397 OR14I1A6ND48 311 aa21.23■□□□□ 0.99
TSPAN4-203ENST00000397397 H0YC42 278 aa21.23■□□□□ 0.99
TSPAN4-203ENST00000397397 EIF1AYO14602 144 aaKnown RBP21.23■□□□□ 0.99
TSPAN4-203ENST00000397397 PLA2G2AP14555 144 aa21.23■□□□□ 0.99
TSPAN4-203ENST00000397397 ZNF708P17019 499 aa21.23■□□□□ 0.99
TSPAN4-203ENST00000397397 PTGS2P35354 604 aa21.23■□□□□ 0.99
TSPAN4-203ENST00000397397 TPD52P55327 224 aaPredicted RBP21.23■□□□□ 0.99
TSPAN4-203ENST00000397397 C3AR1Q16581 482 aa21.23■□□□□ 0.99
TSPAN4-203ENST00000397397 C1orf140Q5VVS0 124 aa21.23■□□□□ 0.99
TSPAN4-203ENST00000397397 AMIGO2Q86SJ2 522 aa21.23■□□□□ 0.99
TSPAN4-203ENST00000397397 GGNQ86UU5 652 aa21.23■□□□□ 0.99
TSPAN4-203ENST00000397397 WDYHV1Q96HA8 205 aa21.23■□□□□ 0.99
TSPAN4-203ENST00000397397 ARL5BQ96KC2 179 aa21.23■□□□□ 0.99
TSPAN4-203ENST00000397397 POTEKPQ9BYX7 375 aa21.23■□□□□ 0.99
TSPAN4-203ENST00000397397 MED31Q9Y3C7 131 aa21.23■□□□□ 0.99
TSPAN4-203ENST00000397397 CFAP46Q8IYW2 2715 aa21.23■□□□□ 0.99
TSPAN4-203ENST00000397397 A0A0J9YW62 118 aa21.22■□□□□ 0.99
TSPAN4-203ENST00000397397 A0A1W2PNR3 127 aa21.22■□□□□ 0.99
TSPAN4-203ENST00000397397 TNFSF11O14788 317 aa21.22■□□□□ 0.99
TSPAN4-203ENST00000397397 NPIPB7O75200 414 aa21.22■□□□□ 0.99
TSPAN4-203ENST00000397397 E2F6O75461 281 aa21.22■□□□□ 0.99
TSPAN4-203ENST00000397397 HMGA2P52926 109 aa21.22■□□□□ 0.99
TSPAN4-203ENST00000397397 SUCLG1P53597 346 aaKnown RBP21.22■□□□□ 0.99
TSPAN4-203ENST00000397397 SEC23BQ15437 767 aa21.22■□□□□ 0.99
TSPAN4-203ENST00000397397 WLSQ5T9L3 541 aa21.22■□□□□ 0.99
TSPAN4-203ENST00000397397 C1QL3Q5VWW1 255 aa21.22■□□□□ 0.99
TSPAN4-203ENST00000397397 TBPL2Q6SJ96 375 aa21.22■□□□□ 0.99
TSPAN4-203ENST00000397397 C5orf46Q6UWT4 87 aa21.22■□□□□ 0.99
TSPAN4-203ENST00000397397 ESPNLQ6ZVH7 1005 aa21.22■□□□□ 0.99
TSPAN4-203ENST00000397397 RRM2BQ7LG56 351 aa21.22■□□□□ 0.99
TSPAN4-203ENST00000397397 CHERPQ8IWX8 916 aaKnown RBP21.22■□□□□ 0.99
TSPAN4-203ENST00000397397 OR4C15Q8NGM1 316 aa21.22■□□□□ 0.99
TSPAN4-203ENST00000397397 PFN4Q8NHR9 129 aa21.22■□□□□ 0.99
TSPAN4-203ENST00000397397 KTI12Q96EK9 354 aaPredicted RBP21.22■□□□□ 0.99
TSPAN4-203ENST00000397397 EPYCQ99645 322 aa21.22■□□□□ 0.99
TSPAN4-203ENST00000397397 PKP2Q99959 881 aa21.22■□□□□ 0.99
TSPAN4-203ENST00000397397 FUZQ9BT04 418 aa21.22■□□□□ 0.99
TSPAN4-203ENST00000397397 SLC19A3Q9BZV2 496 aa21.22■□□□□ 0.99
TSPAN4-203ENST00000397397 RRP15Q9Y3B9 282 aaKnown RBP21.22■□□□□ 0.99
TSPAN4-203ENST00000397397 HDGFL3Q9Y3E1 203 aa21.22■□□□□ 0.99
TSPAN4-203ENST00000397397 SVILO95425 2214 aa21.22■□□□□ 0.99
TSPAN4-203ENST00000397397 TRAV36DV7A0A075B6V5 113 aa21.21■□□□□ 0.99
TSPAN4-203ENST00000397397 H0Y3Z8 333 aa21.21■□□□□ 0.99
TSPAN4-203ENST00000397397 BCKDKO14874 412 aa21.21■□□□□ 0.99
TSPAN4-203ENST00000397397 PIP5K1CO60331 668 aa21.21■□□□□ 0.99
TSPAN4-203ENST00000397397 AHSA1O95433 338 aa21.21■□□□□ 0.99
TSPAN4-203ENST00000397397 BAG2O95816 211 aa21.21■□□□□ 0.99
TSPAN4-203ENST00000397397 CPN1P15169 458 aa21.21■□□□□ 0.99
TSPAN4-203ENST00000397397 IDUAP35475 653 aa21.21■□□□□ 0.99
TSPAN4-203ENST00000397397 RPS5P46782 204 aaKnown RBP21.21■□□□□ 0.99
TSPAN4-203ENST00000397397 LIMS1P48059 325 aa21.21■□□□□ 0.99
TSPAN4-203ENST00000397397 IST1P53990 364 aa21.21■□□□□ 0.99
TSPAN4-203ENST00000397397 CLDN15P56746 228 aa21.21■□□□□ 0.99
TSPAN4-203ENST00000397397 MYBPHQ13203 477 aa21.21■□□□□ 0.99
TSPAN4-203ENST00000397397 PDSS1Q5T2R2 415 aa21.21■□□□□ 0.99
TSPAN4-203ENST00000397397 HBMQ6B0K9 141 aa21.21■□□□□ 0.99
TSPAN4-203ENST00000397397 HMBOX1Q6NT76 420 aa21.21■□□□□ 0.99
TSPAN4-203ENST00000397397 MBOAT2Q6ZWT7 520 aa21.21■□□□□ 0.99
TSPAN4-203ENST00000397397 RNF113BQ8IZP6 322 aaKnown RBP21.21■□□□□ 0.99
TSPAN4-203ENST00000397397 OR2V1Q8NHB1 315 aa21.21■□□□□ 0.99
TSPAN4-203ENST00000397397 BDH2Q9BUT1 245 aa21.21■□□□□ 0.99
TSPAN4-203ENST00000397397 MEPEQ9NQ76 525 aaPredicted RBP21.21■□□□□ 0.99
TSPAN4-203ENST00000397397 SH3PXD2BA1X283 911 aa21.21■□□□□ 0.99
TSPAN4-203ENST00000397397 ABOP16442 354 aa21.21■□□□□ 0.99
TSPAN4-203ENST00000397397 DNAJA1P31689 397 aaKnown RBP21.21■□□□□ 0.99
TSPAN4-203ENST00000397397 LSM11P83369 360 aaKnown RBP eCLIP21.21■□□□□ 0.99
TSPAN4-203ENST00000397397 GK3PQ14409 553 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms