RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 CASP12Q6UXS9 341 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 ZNF786Q8N393 782 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 TEX29Q8N6K0 151 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 ZNF614Q8N883 585 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 PSMA8Q8TAA3 256 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 ADAMTS15Q8TE58 950 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 NEU4Q8WWR8 484 aaPredicted RBP8.17□□□□□ -1.1
NEDD9-203ENST00000397378 CCDC126Q96EE4 140 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 TSSK3Q96PN8 268 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 CCT8L2Q96SF2 557 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 THUMPD3Q9BV44 507 aaKnown RBP8.17□□□□□ -1.1
NEDD9-203ENST00000397378 KATNB1Q9BVA0 655 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 NMUR2Q9GZQ4 415 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 SLITRK2Q9H156 845 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 MMP27Q9H306 513 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 OBP2BQ9NPH6 170 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 SLC7A10Q9NS82 523 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 PARPBPQ9NWS1 579 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 C1orf109Q9NX04 203 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 UPB1Q9UBR1 384 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 HDGFL3Q9Y3E1 203 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 PCDHB14Q9Y5E9 798 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 SPIN1Q9Y657 262 aaPredicted RBP8.17□□□□□ -1.1
NEDD9-203ENST00000397378 KCNE3Q9Y6H6 103 aa8.17□□□□□ -1.1
NEDD9-203ENST00000397378 IGHV1-18A0A0C4DH31 117 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 SLC28A1O00337 649 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 ANKRD28O15084 1053 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 CRCPO75575 148 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 MSMBP08118 114 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 TFPIP10646 304 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 UROSP10746 265 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 DAOP14920 347 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 IFNGR1P15260 489 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 DDX5P17844 614 aaKnown RBP8.16□□□□□ -1.1
NEDD9-203ENST00000397378 APOBEC1P41238 236 aaKnown RBP8.16□□□□□ -1.1
NEDD9-203ENST00000397378 ASMTP46597 345 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 CCT3P49368 545 aaKnown RBP8.16□□□□□ -1.1
NEDD9-203ENST00000397378 KHKP50053 298 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 IL13RA1P78552 427 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 RIN1Q13671 783 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 ZNF141Q15928 474 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 C3orf36Q3SXR2 165 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 PDZK1Q5T2W1 519 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 TSPO2Q5TGU0 170 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 C9orf135Q5VTT2 229 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 RNF165Q6ZSG1 346 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 FRMD7Q6ZUT3 714 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 R3HCC1LQ7Z5L2 792 aaKnown RBP8.16□□□□□ -1.1
NEDD9-203ENST00000397378 CCDC103Q8IW40 242 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 CCNYL1Q8N7R7 359 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 OR56A1Q8NGH5 318 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 ARL5BQ96KC2 179 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 DUX5Q96PT3 197 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 SDF2Q99470 211 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 KCNS3Q9BQ31 491 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 CCDC106Q9BWC9 280 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 C1QTNF5Q9BXJ0 243 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 TSPYL1Q9H0U9 437 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 TNFRSF12AQ9NP84 129 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 GPATCH2Q9NW75 528 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 CHRNA9Q9UGM1 479 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 FAF1Q9UNN5 650 aaPredicted RBP8.16□□□□□ -1.1
NEDD9-203ENST00000397378 TRAPPC4Q9Y296 219 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 SLC9A8Q9Y2E8 581 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 FLVCR1Q9Y5Y0 555 aa8.16□□□□□ -1.1
NEDD9-203ENST00000397378 PNPP00491 289 aa8.15□□□□□ -1.1
NEDD9-203ENST00000397378 CRYAAP02489 173 aa8.15□□□□□ -1.1
NEDD9-203ENST00000397378 ERCC1P07992 297 aaPredicted RBP8.15□□□□□ -1.1
NEDD9-203ENST00000397378 GSTA1P08263 222 aa8.15□□□□□ -1.1
NEDD9-203ENST00000397378 OR4A8P0C604 315 aa8.15□□□□□ -1.1
NEDD9-203ENST00000397378 NEFHP12036 1026 aa8.15□□□□□ -1.1
NEDD9-203ENST00000397378 EFNA1P20827 205 aaPredicted RBP8.15□□□□□ -1.1
NEDD9-203ENST00000397378 GCH1P30793 250 aa8.15□□□□□ -1.1
NEDD9-203ENST00000397378 SLC7A5Q01650 507 aa8.15□□□□□ -1.1
NEDD9-203ENST00000397378 TP53BP2Q13625 1128 aa8.15□□□□□ -1.1
NEDD9-203ENST00000397378 ZNF572Q7Z3I7 529 aaPredicted RBP8.15□□□□□ -1.1
NEDD9-203ENST00000397378 SPATA19Q7Z5L4 167 aa8.15□□□□□ -1.1
NEDD9-203ENST00000397378 POMGNT2Q8NAT1 580 aa8.15□□□□□ -1.1
NEDD9-203ENST00000397378 OR4F15Q8NGB8 312 aa8.15□□□□□ -1.1
NEDD9-203ENST00000397378 SFXN5Q8TD22 340 aa8.15□□□□□ -1.1
NEDD9-203ENST00000397378 C22orf15Q8WYQ4 148 aa8.15□□□□□ -1.1
NEDD9-203ENST00000397378 TMEM45BQ96B21 275 aa8.15□□□□□ -1.1
NEDD9-203ENST00000397378 SLC38A2Q96QD8 506 aa8.15□□□□□ -1.1
NEDD9-203ENST00000397378 OR7D2Q96RA2 312 aa8.15□□□□□ -1.1
NEDD9-203ENST00000397378 NARFLQ9H6Q4 476 aa8.15□□□□□ -1.1
NEDD9-203ENST00000397378 NTN4Q9HB63 628 aa8.15□□□□□ -1.1
NEDD9-203ENST00000397378 TMEM181Q9P2C4 612 aa8.15□□□□□ -1.1
NEDD9-203ENST00000397378 CRNNQ9UBG3 495 aaPredicted RBP8.15□□□□□ -1.1
NEDD9-203ENST00000397378 BAIAP2L1Q9UHR4 511 aa8.15□□□□□ -1.1
NEDD9-203ENST00000397378 ATP6V1HQ9UI12 483 aa8.15□□□□□ -1.1
NEDD9-203ENST00000397378 KCNE5Q9UJ90 142 aa8.15□□□□□ -1.1
NEDD9-203ENST00000397378 TMED5Q9Y3A6 229 aa8.15□□□□□ -1.1
NEDD9-203ENST00000397378 A0A087WUV0 522 aaPredicted RBP8.14□□□□□ -1.11
NEDD9-203ENST00000397378 SCAMP2O15127 329 aaKnown RBP8.14□□□□□ -1.11
NEDD9-203ENST00000397378 EIF1BO60739 113 aaKnown RBP8.14□□□□□ -1.11
NEDD9-203ENST00000397378 STX11O75558 287 aa8.14□□□□□ -1.11
NEDD9-203ENST00000397378 CYP7B1O75881 506 aa8.14□□□□□ -1.11
NEDD9-203ENST00000397378 AK1P00568 194 aa8.14□□□□□ -1.11
NEDD9-203ENST00000397378 CSTAP01040 98 aa8.14□□□□□ -1.11
NEDD9-203ENST00000397378 UBTFL6P0CB48 400 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms