RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 PRAMEF27A3QJZ7 478 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 SLC22A20A6NK97 555 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 GMFGO60234 142 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 FADS1O60427 444 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 PRKD3O94806 890 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 CGAP01215 116 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 RAP2AP10114 183 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 LOXP28300 417 aaPredicted RBP9.27□□□□□ -0.93
NEDD8-202ENST00000396828 IL12BP29460 328 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 SLC7A1P30825 629 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 EVI2BP34910 448 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 GCKP35557 465 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 DSCR4P56555 118 aaPredicted RBP9.27□□□□□ -0.93
NEDD8-202ENST00000396828 SIRPAP78324 504 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 CHRNEQ04844 493 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 GPR68Q15743 365 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 MAPK11Q15759 364 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 CCNJQ5T5M9 372 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 TYW3Q6IPR3 259 aaKnown RBP9.27□□□□□ -0.93
NEDD8-202ENST00000396828 APOOLQ6UXV4 268 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 BIVMQ86UB2 503 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 PEX5LQ8IYB4 626 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 ZNF619Q8N2I2 560 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 FNDC9Q8TBE3 224 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 CANT1Q8WVQ1 401 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 PYDC1Q8WXC3 89 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 PROX1Q92786 737 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 ARSGQ96EG1 525 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 SLC47A1Q96FL8 570 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 DUS3LQ96G46 650 aaKnown RBP9.27□□□□□ -0.93
NEDD8-202ENST00000396828 PYURFQ96I23 114 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 SEPHS2Q99611 448 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 NPAS1Q99742 590 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 ZNF350Q9GZX5 532 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 HOXD1Q9GZZ0 328 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 PIGMQ9H3S5 423 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 ARMC7Q9H6L4 198 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 MAGIXQ9H6Y5 334 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 S100A14Q9HCY8 104 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 BEX4Q9NWD9 120 aaPredicted RBP9.27□□□□□ -0.93
NEDD8-202ENST00000396828 PPP4R1LQ9P1A2 415 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 SLC13A4Q9UKG4 626 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 MKLN1Q9UL63 735 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 IFT52Q9Y366 437 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 GPC6Q9Y625 555 aaPredicted RBP9.27□□□□□ -0.93
NEDD8-202ENST00000396828 V9GYQ6 96 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 PRR14LQ5THK1 2151 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 DSPPQ9NZW4 1301 aa9.27□□□□□ -0.93
NEDD8-202ENST00000396828 RAI1Q7Z5J4 1906 aaPredicted RBP9.27□□□□□ -0.93
NEDD8-202ENST00000396828 NUP214P35658 2090 aaPredicted RBP9.27□□□□□ -0.93
NEDD8-202ENST00000396828 OR2M5A3KFT3 312 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 MSTNO14793 375 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 CASKO14936 926 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 SEC14L5O43304 696 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 FCMRO60667 390 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 GCM2O75603 506 aaPredicted RBP9.26□□□□□ -0.93
NEDD8-202ENST00000396828 KRT36O76013 467 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 MFN2O95140 757 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 ATP6V1G2O95670 118 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 IL33O95760 270 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 LY6G6DO95868 133 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 IGKV1D-16P01601 117 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 OPN1SWP03999 348 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 DBIP07108 87 aaKnown RBP9.26□□□□□ -0.93
NEDD8-202ENST00000396828 FCGR1AP12314 374 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 IL7RP16871 459 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 HK1P19367 917 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 LCN1P31025 176 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 EFR3AQ14156 821 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 LARS2Q15031 903 aaKnown RBP9.26□□□□□ -0.93
NEDD8-202ENST00000396828 RCN1Q15293 331 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 BCL2A1Q16548 175 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.26□□□□□ -0.93
NEDD8-202ENST00000396828 ZNF311Q5JNZ3 666 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 Q5PR19 223 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 RAET1LQ5VY80 246 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 ANKRD34AQ69YU3 496 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 CLEC9AQ6UXN8 241 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 FRRS1Q6ZNA5 592 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 P4HA3Q7Z4N8 544 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 GALNT10Q86SR1 603 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 MARCH3Q86UD3 253 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 ADGRG5Q8IZF4 528 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 ZNF610Q8N9Z0 462 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 ZNF527Q8NB42 609 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 OR4K17Q8NGC6 315 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 FAM110BQ8TC76 370 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 DUSP19Q8WTR2 217 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 OIT3Q8WWZ8 545 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 TAMM41Q96BW9 452 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 PIK3IP1Q96FE7 263 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 ZC3HAV1LQ96H79 300 aaKnown RBP9.26□□□□□ -0.93
NEDD8-202ENST00000396828 HSH2DQ96JZ2 352 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 KLHDC3Q9BQ90 382 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 PINK1Q9BXM7 581 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 SAP130Q9H0E3 1048 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 SLC38A1Q9H2H9 487 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 RASSF4Q9H2L5 321 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 ARMC1Q9NVT9 282 aa9.26□□□□□ -0.93
NEDD8-202ENST00000396828 NDRG3Q9UGV2 375 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms