RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 SLCO1B7G3V0H7 640 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 HS3ST1O14792 307 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 FRS3O43559 492 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 PGM3O95394 542 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 PMS2P2O95744 297 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 CD8AP01732 235 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 IL6P05231 212 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 BCHEP06276 602 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 DANCRP0C864 163 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 NR2F1P10589 423 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 TFPIP10646 304 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 BMP2P12643 396 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 PAX1P15863 534 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 SLC1A3P43003 542 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 SLC16A1P53985 500 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 SLC25A3Q00325 362 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 HOXC5Q00444 222 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 BNIP2Q12982 314 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 ITGADQ13349 1161 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 P2RY6Q15077 328 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 PDK3Q15120 406 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 GSTA3Q16772 222 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 BHLHA15Q7RTS1 189 aaPredicted RBP7.81□□□□□ -1.16
ATG4A-205ENST00000394892 CMIPQ8IY22 773 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 ZNF433Q8N7K0 673 aaPredicted RBP7.81□□□□□ -1.16
ATG4A-205ENST00000394892 STEAP2Q8NFT2 490 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 OR52P1PQ8NH57 321 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 ZNF563Q8TA94 476 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 WDR60Q8WVS4 1066 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 TMEM234Q8WY98 164 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 AKAP1Q92667 903 aaKnown RBP eCLIP7.81□□□□□ -1.16
ATG4A-205ENST00000394892 PERPQ96FX8 193 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 TMEM19Q96HH6 336 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 REXO5Q96IC2 774 aaKnown RBP7.81□□□□□ -1.16
ATG4A-205ENST00000394892 ZNF701Q9NV72 531 aaPredicted RBP7.81□□□□□ -1.16
ATG4A-205ENST00000394892 KLHL9Q9P2J3 617 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 ZANQ9Y493 2812 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 HEATR5AQ86XA9 2040 aa7.81□□□□□ -1.16
ATG4A-205ENST00000394892 RAI1Q7Z5J4 1906 aaPredicted RBP7.8□□□□□ -1.16
ATG4A-205ENST00000394892 CFAP73A6NFT4 308 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 LIPT2A6NK58 231 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 SHISA9B4DS77 424 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 OVOL3O00110 214 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 ZNF208O43345 1280 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 NPIPB7O75200 414 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 NDUFS7O75251 213 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 ERLIN1O75477 346 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 SASH3O75995 380 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 KRT75O95678 551 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 DBIP07108 87 aaKnown RBP7.8□□□□□ -1.16
ATG4A-205ENST00000394892 ITGA5P08648 1049 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 CRATP43155 626 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 PTH2RP49190 550 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 POLR2HP52434 150 aaKnown RBP7.8□□□□□ -1.16
ATG4A-205ENST00000394892 OR2B6P58173 313 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 DSTNP60981 165 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 EGR4Q05215 589 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 BSPH1Q075Z2 132 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 KRTAP1-1Q07627 177 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 LGALS3BPQ08380 585 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 SLC17A1Q14916 467 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 RGNQ15493 299 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 ADRM1Q16186 407 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 PGGHGQ32M88 737 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 LRIF1Q5T3J3 769 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 ADAM5Q6NVV9 412 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 BLOC1S3Q6QNY0 202 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 C20orf204Q6ZNR8 217 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 MSANTD1Q6ZTZ1 278 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 GALNT5Q7Z7M9 940 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 SERPINA11Q86U17 422 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 STK32CQ86UX6 486 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 MIER2Q8N344 545 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 TRIML2Q8N7C3 387 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 TMEM99Q8N816 258 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 ZNF611Q8N823 705 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 WDR31Q8NA23 367 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 KBTBD8Q8NFY9 601 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 OR52E4Q8NGH9 312 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 SLC25A43Q8WUT9 341 aaPredicted RBP7.8□□□□□ -1.16
ATG4A-205ENST00000394892 KISS1RQ969F8 398 aaPredicted RBP7.8□□□□□ -1.16
ATG4A-205ENST00000394892 C3orf49Q96BT1 292 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 ITCHQ96J02 903 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 ATP6V1G3Q96LB4 118 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 ZBTB18Q99592 522 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 PRR14Q9BWN1 585 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 HDHD5Q9BXW7 423 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 GSX2Q9BZM3 304 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 TRIM2Q9C040 744 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 ZNF385DQ9H6B1 395 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 BCL2L10Q9HD36 194 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 SERINC1Q9NRX5 453 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 VAPAQ9P0L0 249 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 TMEM181Q9P2C4 612 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 TRAPPC4Q9Y296 219 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 ZNF443Q9Y2A4 671 aaPredicted RBP7.8□□□□□ -1.16
ATG4A-205ENST00000394892 HDGFL3Q9Y3E1 203 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 FLVCR1Q9Y5Y0 555 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 USF3Q68DE3 2245 aa7.8□□□□□ -1.16
ATG4A-205ENST00000394892 FREM1Q5H8C1 2179 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms