RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 TPRA1Q86W33 373 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 POMGNT2Q8NAT1 580 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 MFSD9Q8NBP5 474 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 KCTD12Q96CX2 325 aaKnown RBP14.94□□□□□ -0.02
PCDH1-203ENST00000394536 ORAI3Q9BRQ5 295 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 CENPMQ9NSP4 180 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 ACOXLQ9NUZ1 547 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 FBXL3Q9UKT7 428 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 TBX21Q9UL17 535 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 VWA8A3KMH1 1905 aa14.94□□□□□ -0.02
PCDH1-203ENST00000394536 PKLRP30613 574 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 GNALP38405 381 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 OPRD1P41143 372 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 VASPP50552 380 aaPredicted RBP14.93□□□□□ -0.02
PCDH1-203ENST00000394536 ART1P52961 327 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 MAPK14Q16539 360 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 Q5BKY6 102 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 ANKRD33Q7Z3H0 272 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 PAQR7Q86WK9 346 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.93□□□□□ -0.02
PCDH1-203ENST00000394536 OR9A4Q8NGU2 314 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 ZDHHC1Q8WTX9 485 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 WDR92Q96MX6 357 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 C14orf105Q9NVL8 296 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 EVA1BQ9NVM1 165 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 CLDND1Q9NY35 253 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 TRAV18A0A075B6X5 111 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 TMEM72A0PK05 275 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 APOC3P02656 99 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 OR56B4Q8NH76 319 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 MMABQ96EY8 250 aaPredicted RBP14.93□□□□□ -0.02
PCDH1-203ENST00000394536 ENKD1Q9H0I2 346 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 ACTR10Q9NZ32 417 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 CKLFQ9UBR5 152 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 SPAG17Q6Q759 2223 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 LILRB5O75023 590 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 SIX6O95475 246 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 GPR75O95800 540 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 CISD3P0C7P0 127 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 ENDOUP21128 410 aaKnown RBP14.93□□□□□ -0.02
PCDH1-203ENST00000394536 NRG3P56975 720 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 PCGF3Q3KNV8 242 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 SPRED2Q7Z698 418 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 BOLLQ8N9W6 283 aaKnown RBP14.93□□□□□ -0.02
PCDH1-203ENST00000394536 GALNT11Q8NCW6 608 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 MARVELD1Q9BSK0 173 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 PPP1R3EQ9H7J1 279 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 CYSLTR2Q9NS75 346 aa14.93□□□□□ -0.02
PCDH1-203ENST00000394536 SIRT4Q9Y6E7 314 aaPredicted RBP14.93□□□□□ -0.02
PCDH1-203ENST00000394536 SELENOFO60613 162 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 PSMB1P20618 241 aaKnown RBP14.92□□□□□ -0.02
PCDH1-203ENST00000394536 ITPRIPL2Q3MIP1 535 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 PXDC1Q5TGL8 231 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 ZNF550Q7Z398 422 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 FRMD1Q8N878 549 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 POGLUT1Q8NBL1 392 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 TSSK2Q96PF2 358 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 ISYNA1Q9NPH2 558 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 LHX9Q9NQ69 397 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 PRSS38A1L453 326 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 PEX14O75381 377 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 KLF8O95600 359 aaPredicted RBP14.92□□□□□ -0.02
PCDH1-203ENST00000394536 RECKO95980 971 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 NPR2P20594 1047 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 POU4F2Q12837 409 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 TMEM91Q6ZNR0 172 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 REM2Q8IYK8 340 aaPredicted RBP14.92□□□□□ -0.02
PCDH1-203ENST00000394536 DNAAF1Q8NEP3 725 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 ADAMTS14Q8WXS8 1223 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 IL23AQ9NPF7 189 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 V9GY05 133 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 RTTNQ86VV8 2226 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 A0A1B0GVI7 797 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 ERVH48-1M5A8F1 160 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 KLHL18O94889 574 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 RENP00797 406 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 NID1P14543 1247 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 CXCL3P19876 107 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 CCKBRP32239 447 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 DNASE1L1P49184 302 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 ADAM8P78325 824 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 OR4D9Q8NGE8 314 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 RASD2Q96D21 266 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 TIMM29Q9BSF4 260 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 CMC2Q9NRP2 79 aa14.92□□□□□ -0.02
PCDH1-203ENST00000394536 CENPVL1A0A0U1RR11 272 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 SHISA3A0PJX4 238 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 FGF17O60258 216 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 SPDEFO95238 335 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 CD2P06729 351 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 LIPCP11150 499 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 HIST1H1CP16403 213 aaKnown RBP14.91□□□□□ -0.02
PCDH1-203ENST00000394536 EIF1AXP47813 144 aaKnown RBP14.91□□□□□ -0.02
PCDH1-203ENST00000394536 VEGFBP49765 207 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 GRK1Q15835 563 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 TCTE1Q5JU00 501 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 OR52I2Q8NH67 350 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 TSPAN11A1L157 253 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 CHP2O43745 196 aa14.91□□□□□ -0.02
PCDH1-203ENST00000394536 NARSO43776 548 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms