RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 KHKP50053 298 aa15.37■□□□□ 0.05
SNRPA1-202ENST00000394082 CLNS1AP54105 237 aaKnown RBP15.37■□□□□ 0.05
SNRPA1-202ENST00000394082 PHC1P78364 1004 aa15.37■□□□□ 0.05
SNRPA1-202ENST00000394082 VLDLRP98155 873 aa15.37■□□□□ 0.05
SNRPA1-202ENST00000394082 CHRFAM7AQ494W8 412 aa15.37■□□□□ 0.05
SNRPA1-202ENST00000394082 CLEC2AQ6UVW9 174 aa15.37■□□□□ 0.05
SNRPA1-202ENST00000394082 OR52N5Q8NH56 324 aa15.37■□□□□ 0.05
SNRPA1-202ENST00000394082 ZG16BQ96DA0 208 aa15.37■□□□□ 0.05
SNRPA1-202ENST00000394082 TRNT1Q96Q11 434 aaKnown RBP15.37■□□□□ 0.05
SNRPA1-202ENST00000394082 TNFRSF13CQ96RJ3 184 aa15.37■□□□□ 0.05
SNRPA1-202ENST00000394082 INPP5KQ9BT40 448 aa15.37■□□□□ 0.05
SNRPA1-202ENST00000394082 PIF1Q9H611 641 aa15.37■□□□□ 0.05
SNRPA1-202ENST00000394082 HAO1Q9UJM8 370 aa15.37■□□□□ 0.05
SNRPA1-202ENST00000394082 SLC9A8Q9Y2E8 581 aa15.37■□□□□ 0.05
SNRPA1-202ENST00000394082 RAP2CQ9Y3L5 183 aa15.37■□□□□ 0.05
SNRPA1-202ENST00000394082 IGHV4-30-2A0A087WSY4 118 aa15.36■□□□□ 0.05
SNRPA1-202ENST00000394082 BCAS1O75363 584 aaPredicted RBP15.36■□□□□ 0.05
SNRPA1-202ENST00000394082 IGHV3-9P01782 118 aa15.36■□□□□ 0.05
SNRPA1-202ENST00000394082 ITGA5P08648 1049 aa15.36■□□□□ 0.05
SNRPA1-202ENST00000394082 CREB1P16220 341 aa15.36■□□□□ 0.05
SNRPA1-202ENST00000394082 CASP9P55211 416 aa15.36■□□□□ 0.05
SNRPA1-202ENST00000394082 SLC35A1P78382 337 aa15.36■□□□□ 0.05
SNRPA1-202ENST00000394082 TGFBR3Q03167 851 aa15.36■□□□□ 0.05
SNRPA1-202ENST00000394082 PLAURQ03405 335 aa15.36■□□□□ 0.05
SNRPA1-202ENST00000394082 RAB35Q15286 201 aa15.36■□□□□ 0.05
SNRPA1-202ENST00000394082 C6orf52Q5T4I8 152 aa15.36■□□□□ 0.05
SNRPA1-202ENST00000394082 TNFAIP8L2Q6P589 184 aaPredicted RBP15.36■□□□□ 0.05
SNRPA1-202ENST00000394082 OLIG3Q7RTU3 272 aa15.36■□□□□ 0.05
SNRPA1-202ENST00000394082 ZNF781Q8N8C0 355 aa15.36■□□□□ 0.05
SNRPA1-202ENST00000394082 RAB8BQ92930 207 aa15.36■□□□□ 0.05
SNRPA1-202ENST00000394082 DDIT4LQ96D03 193 aa15.36■□□□□ 0.05
SNRPA1-202ENST00000394082 CCDC115Q96NT0 180 aa15.36■□□□□ 0.05
SNRPA1-202ENST00000394082 REPIN1Q9BWE0 567 aaKnown RBP15.36■□□□□ 0.05
SNRPA1-202ENST00000394082 FKRPQ9H9S5 495 aa15.36■□□□□ 0.05
SNRPA1-202ENST00000394082 SSU72Q9NP77 194 aaKnown RBP15.36■□□□□ 0.05
SNRPA1-202ENST00000394082 BTNL2Q9UIR0 455 aa15.36■□□□□ 0.05
SNRPA1-202ENST00000394082 CDC42EP3Q9UKI2 254 aa15.36■□□□□ 0.05
SNRPA1-202ENST00000394082 POU2F3Q9UKI9 436 aa15.36■□□□□ 0.05
SNRPA1-202ENST00000394082 AMDHD2Q9Y303 409 aa15.36■□□□□ 0.05
SNRPA1-202ENST00000394082 PRAMEF27A3QJZ7 478 aa15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 AGAP5A6NIR3 686 aa15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 HMGN4O00479 90 aa15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 ITM2AO43736 263 aa15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 CSF3P09919 207 aa15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 FAM157CP0CG43 387 aa15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 PAX7P23759 505 aa15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 RYKP34925 604 aa15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 SLC1A3P43003 542 aa15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 IDH2P48735 452 aaKnown RBP15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 RPL14P50914 215 aaKnown RBP15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 ANXA11P50995 505 aaKnown RBP15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 ZNF83P51522 516 aa15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 POLR2HP52434 150 aaKnown RBP15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 ABCE1P61221 599 aaKnown RBP15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 HPCAP84074 193 aa15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 LRRC74AQ0VAA2 488 aa15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 SLC17A1Q14916 467 aa15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 PDCD2Q16342 344 aaPredicted RBP15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 TMEM249Q2WGJ8 235 aa15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 PAQR6Q6TCH4 344 aa15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 ANKRD46Q86W74 232 aa15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 CCDC103Q8IW40 242 aa15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 WDR31Q8NA23 367 aa15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 TMEM158Q8WZ71 300 aa15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 PROX1Q92786 737 aa15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 TMEM45BQ96B21 275 aa15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 SLC35A5Q9BS91 424 aa15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 NAA11Q9BSU3 229 aaPredicted RBP15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 OR11A1Q9GZK7 315 aa15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 MTHFD2LQ9H903 347 aaPredicted RBP15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 MARCOQ9UEW3 520 aaPredicted RBP15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 OSGIN1Q9UJX0 560 aa15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 FLVCR1Q9Y5Y0 555 aa15.35■□□□□ 0.05
SNRPA1-202ENST00000394082 TMED7-TICAM2A0A0A6YYA0 188 aa15.34■□□□□ 0.05
SNRPA1-202ENST00000394082 FAM234BA2RU67 622 aa15.34■□□□□ 0.05
SNRPA1-202ENST00000394082 E9PBE3 544 aa15.34■□□□□ 0.05
SNRPA1-202ENST00000394082 RPS4Y1P22090 263 aaKnown RBP15.34■□□□□ 0.05
SNRPA1-202ENST00000394082 CHI3L1P36222 383 aaPredicted RBP15.34■□□□□ 0.05
SNRPA1-202ENST00000394082 FABP6P51161 128 aa15.34■□□□□ 0.05
SNRPA1-202ENST00000394082 OR2B6P58173 313 aa15.34■□□□□ 0.05
SNRPA1-202ENST00000394082 CHRNEQ04844 493 aa15.34■□□□□ 0.05
SNRPA1-202ENST00000394082 CHRNB3Q05901 458 aa15.34■□□□□ 0.05
SNRPA1-202ENST00000394082 GNA13Q14344 377 aa15.34■□□□□ 0.05
SNRPA1-202ENST00000394082 GSTA3Q16772 222 aa15.34■□□□□ 0.05
SNRPA1-202ENST00000394082 GPAT3Q53EU6 434 aa15.34■□□□□ 0.05
SNRPA1-202ENST00000394082 SPANXN4Q5MJ08 99 aa15.34■□□□□ 0.05
SNRPA1-202ENST00000394082 OGFOD2Q6N063 350 aa15.34■□□□□ 0.05
SNRPA1-202ENST00000394082 B3GLCTQ6Y288 498 aa15.34■□□□□ 0.05
SNRPA1-202ENST00000394082 LRRC74BQ6ZQY2 392 aa15.34■□□□□ 0.05
SNRPA1-202ENST00000394082 TRIML2Q8N7C3 387 aa15.34■□□□□ 0.05
SNRPA1-202ENST00000394082 SF3B5Q9BWJ5 86 aaKnown RBP15.34■□□□□ 0.05
SNRPA1-202ENST00000394082 SLC38A1Q9H2H9 487 aa15.34■□□□□ 0.05
SNRPA1-202ENST00000394082 SLC17A5Q9NRA2 495 aa15.34■□□□□ 0.05
SNRPA1-202ENST00000394082 TMED7Q9Y3B3 224 aa15.34■□□□□ 0.05
SNRPA1-202ENST00000394082 ALPK2Q86TB3 2170 aa15.34■□□□□ 0.05
SNRPA1-202ENST00000394082 CLDN24A6NM45 220 aa15.33■□□□□ 0.04
SNRPA1-202ENST00000394082 RNF212BA8MTL3 300 aa15.33■□□□□ 0.04
SNRPA1-202ENST00000394082 M0R1B8 84 aa15.33■□□□□ 0.04
SNRPA1-202ENST00000394082 TM9SF1O15321 606 aa15.33■□□□□ 0.04
SNRPA1-202ENST00000394082 GPRIN2O60269 458 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms