RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 SLC25A30Q5SVS4 291 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 PRAMEF20Q5VT98 475 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 BORAQ6PGQ7 559 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 HIST3H2AQ7L7L0 130 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 GRINAQ7Z429 371 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 IGFN1Q86VF2 1251 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 TMPRSS12Q86WS5 348 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 CACTIN-AS1Q8N1I8 211 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 SIRT6Q8N6T7 355 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 ANKK1Q8NFD2 765 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 TMEM234Q8WY98 164 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 HIST1H2ACQ93077 130 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 MUL1Q969V5 352 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 NANSQ9NR45 359 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 MED17Q9NVC6 651 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 CNOT2Q9NZN8 540 aaKnown RBP7.86□□□□□ -1.15
TDP1-203ENST00000393454 RSL24D1Q9UHA3 163 aaKnown RBP7.86□□□□□ -1.15
TDP1-203ENST00000393454 VDAC3Q9Y277 283 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 TMED7Q9Y3B3 224 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 COMMD3-BMI1R4GMX3 469 aa7.86□□□□□ -1.15
TDP1-203ENST00000393454 RIF1Q5UIP0 2472 aaKnown RBP7.86□□□□□ -1.15
TDP1-203ENST00000393454 CFAP54Q96N23 3096 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 ZNF292O60281 2723 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 A0A1W2PQ72 361 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 RIIAD1A6NNX1 92 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 ADAM10O14672 748 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 PRODHO43272 600 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 SUSD5O60279 629 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 SEC14L2O76054 403 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 DKK1O94907 266 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 TCEA1P23193 301 aaKnown RBP7.85□□□□□ -1.15
TDP1-203ENST00000393454 MLF1P58340 268 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 FOXK2Q01167 660 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 EGR4Q05215 589 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 Q0VFX4 171 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 ATP1A4Q13733 1029 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 ZNF74Q16587 644 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 CXXC5Q7LFL8 322 aaKnown RBP7.85□□□□□ -1.15
TDP1-203ENST00000393454 SLC46A3Q7Z3Q1 461 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 RAB43Q86YS6 212 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 CPOQ8IVL8 374 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 LNX2Q8N448 690 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 OR13F1Q8NGS4 319 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 RFKQ969G6 155 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 SLC25A36Q96CQ1 311 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 KTI12Q96EK9 354 aaPredicted RBP7.85□□□□□ -1.15
TDP1-203ENST00000393454 RNFT2Q96EX2 444 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 ERMAPQ96PL5 475 aaPredicted RBP7.85□□□□□ -1.15
TDP1-203ENST00000393454 RBM38Q9H0Z9 239 aaKnown RBP7.85□□□□□ -1.15
TDP1-203ENST00000393454 ACOT13Q9NPJ3 140 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 HPF1Q9NWY4 346 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 PCDHGB1Q9Y5G3 927 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 WIF1Q9Y5W5 379 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 TMEM72A0PK05 275 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 HTR3EA5X5Y0 456 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 FAM183AA6NL82 134 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 KDM4EB2RXH2 506 aaPredicted RBP7.85□□□□□ -1.15
TDP1-203ENST00000393454 NOL3O60936 208 aaKnown RBP7.85□□□□□ -1.15
TDP1-203ENST00000393454 WISP1O95388 367 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 LCKP06239 509 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 PIPP12273 146 aaPredicted RBP7.85□□□□□ -1.15
TDP1-203ENST00000393454 HK1P19367 917 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 MSX1P28360 303 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 PTGDSP41222 190 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 HTR3AP46098 478 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 NOVA1P51513 510 aaKnown RBP7.85□□□□□ -1.15
TDP1-203ENST00000393454 ZNF41P51814 821 aaPredicted RBP7.85□□□□□ -1.15
TDP1-203ENST00000393454 CDH11P55287 796 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 SUMO3P55854 103 aaPredicted RBP7.85□□□□□ -1.15
TDP1-203ENST00000393454 FHL1Q13642 323 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 TUBA3CQ13748 450 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 KLHL22Q53GT1 634 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 GTF2IRD2BQ6EKJ0 949 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 PLBD1Q6P4A8 553 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 ARSKQ6UWY0 536 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 GTF2IRD2Q86UP8 949 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 ADGRG3Q86Y34 549 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 ATP6V1C2Q8NEY4 427 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 BBS1Q8NFJ9 593 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 OR4K17Q8NGC6 315 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 ST8SIA1Q92185 356 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 TAAR8Q969N4 342 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 TMEM80Q96HE8 168 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 MOGAT1Q96PD6 335 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 SIGLEC11Q96RL6 698 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 MED20Q9H944 212 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 TAS2R16Q9NYV7 291 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 IL17BQ9UHF5 180 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.85□□□□□ -1.15
TDP1-203ENST00000393454 BAIAP2Q9UQB8 552 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 IER3IP1Q9Y5U9 82 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 EML6Q6ZMW3 1958 aa7.85□□□□□ -1.15
TDP1-203ENST00000393454 CNOT1A5YKK6 2376 aaKnown RBP7.84□□□□□ -1.15
TDP1-203ENST00000393454 TRAV36DV7A0A075B6V5 113 aa7.84□□□□□ -1.15
TDP1-203ENST00000393454 ZC3H12DA2A288 527 aaKnown RBP7.84□□□□□ -1.15
TDP1-203ENST00000393454 FAM47E-STBD1D6RA91 191 aa7.84□□□□□ -1.15
TDP1-203ENST00000393454 MCIDASD6RGH6 385 aa7.84□□□□□ -1.15
TDP1-203ENST00000393454 PRR23D1E9PI22 279 aaPredicted RBP7.84□□□□□ -1.15
TDP1-203ENST00000393454 APOL3O95236 402 aa7.84□□□□□ -1.15
TDP1-203ENST00000393454 IFNGP01579 166 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms