RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 HSP90AB3PQ58FF7 597 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 VAX1Q5SQQ9 334 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 C1orf100Q5SVJ3 147 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 LDLRAP1Q5SW96 308 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 HES5Q5TA89 166 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 DDI2Q5TDH0 399 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 TMCO4Q5TGY1 634 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 SPECC1LQ69YQ0 1117 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 ELP2Q6IA86 826 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 ALKBH5Q6P6C2 394 aaKnown RBP-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 METAP1DQ6UB28 335 aaPredicted RBP-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 CFAP77Q6ZQR2 320 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 C17orf107Q6ZR85 190 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 H2AFVQ71UI9 128 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 PGAP1Q75T13 922 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 DAZ4Q86SG3 579 aaKnown RBP-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 PRUNE1Q86TP1 453 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 LRRTM4Q86VH4 590 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 TPRA1Q86W33 373 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 CACUL1Q86Y37 369 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 LYPD6Q86Y78 171 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 TGIF2LXQ8IUE1 241 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 LINC00346Q8IVM7 164 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 CDKL3Q8IVW4 592 aaPredicted RBP-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 NRMQ8IXM6 262 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 AMN1Q8IY45 258 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 THNSL1Q8IYQ7 743 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 MYO1HQ8N1T3 1032 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 GTPBP8Q8N3Z3 284 aaPredicted RBP-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 FRMD1Q8N878 549 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 POMGNT2Q8NAT1 580 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 OR4F15Q8NGB8 312 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 OR4K5Q8NGD3 323 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 OR6C4Q8NGE1 309 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 OR10D4PQ8NGN7 298 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 OR13C5Q8NGS8 318 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 OR8U1Q8NH10 309 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 GOLGA5Q8TBA6 731 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 SLC2A14Q8TDB8 520 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 ABHD3Q8WU67 409 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 SCFD1Q8WVM8 642 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 SLC5A11Q8WWX8 675 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 BRI3BPQ8WY22 251 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 ARPC1AQ92747 370 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 FGF14Q92915 247 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 LHX4Q969G2 390 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 SMARCE1Q969G3 411 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 SLAMF9Q96A28 289 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 SLC35C1Q96A29 364 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 MRPL24Q96A35 216 aaKnown RBP-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 KIAA1191Q96A73 305 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 PYCR2Q96C36 320 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 SDCCAG3Q96C92 435 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 CHMP4CQ96CF2 233 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 FLYWCH2Q96CP2 140 aaKnown RBP-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 MRRFQ96E11 262 aaKnown RBP-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 PGM2Q96G03 612 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 ZNF274Q96GC6 653 aaPredicted RBP-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 SLC25A44Q96H78 314 aaPredicted RBP-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 TMEM80Q96HE8 168 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 FCRL1Q96LA6 429 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 PGLYRP3Q96LB9 341 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 ZNF488Q96MN9 340 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 GPR137Q96N19 417 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 SFXN2Q96NB2 322 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 LRRC3BQ96PB8 259 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 RAB40CQ96S21 281 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 HIST1H4GQ99525 98 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 ZBTB18Q99592 522 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 SEPHS2Q99611 448 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 PRMT1Q99873 361 aaKnown RBP-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 ECSITQ9BQ95 431 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 REEP2Q9BRK0 252 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 SDF4Q9BRK5 362 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 RNF126Q9BV68 326 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 RIOK2Q9BVS4 552 aaKnown RBP-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 NACAP1Q9BZK3 213 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 CHIAQ9BZP6 476 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 TWSG1Q9GZX9 223 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 TTYH1Q9H313 450 aaPredicted RBP-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 RIMS4Q9H426 269 aaPredicted RBP-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 ACTL8Q9H568 366 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 CLMPQ9H6B4 373 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 SYNDIG1Q9H7V2 258 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 VIPAS39Q9H9C1 493 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 CHODLQ9H9P2 273 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 PPCSQ9HAB8 311 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 CDH20Q9HBT6 801 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 CSNK1G1Q9HCP0 422 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 EXOSC4Q9NPD3 245 aaKnown RBP-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 DAZ1Q9NQZ3 744 aaKnown RBP-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 PHPT1Q9NRX4 125 aaPredicted RBP-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 AGPAT4Q9NRZ5 378 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 IRAK4Q9NWZ3 460 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 ELOVL2Q9NXB9 296 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 PPP1R14DQ9NXH3 145 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 CYP39A1Q9NYL5 469 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 C21orf62Q9NYP8 219 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 TREM2Q9NZC2 230 aa-0.56□□□□□ -2.5
TRAJ28-201ENST00000390509 EHFQ9NZC4 300 aa-0.56□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms