RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 GPR45Q9Y5Y3 372 aa12.48□□□□□ -0.41
SHOX-202ENST00000381575 SPIN1Q9Y657 262 aaPredicted RBP12.48□□□□□ -0.41
SHOX-202ENST00000381575 CIB4A0PJX0 185 aa12.47□□□□□ -0.41
SHOX-202ENST00000381575 TMEM120BA0PK00 339 aa12.47□□□□□ -0.41
SHOX-202ENST00000381575 OR5H1A6NKK0 313 aa12.47□□□□□ -0.41
SHOX-202ENST00000381575 CD8AP01732 235 aa12.47□□□□□ -0.41
SHOX-202ENST00000381575 IGHV4-39P01824 125 aa12.47□□□□□ -0.41
SHOX-202ENST00000381575 GKN3PP0CG01 181 aa12.47□□□□□ -0.41
SHOX-202ENST00000381575 NR2F1P10589 423 aa12.47□□□□□ -0.41
SHOX-202ENST00000381575 IMPDH2P12268 514 aa12.47□□□□□ -0.41
SHOX-202ENST00000381575 PPP2R2BQ00005 443 aa12.47□□□□□ -0.41
SHOX-202ENST00000381575 TIMM23BQ5SRD1 257 aa12.47□□□□□ -0.41
SHOX-202ENST00000381575 MRPL2Q5T653 305 aaKnown RBP12.47□□□□□ -0.41
SHOX-202ENST00000381575 FBXW9Q5XUX1 488 aa12.47□□□□□ -0.41
SHOX-202ENST00000381575 CASP12Q6UXS9 341 aa12.47□□□□□ -0.41
SHOX-202ENST00000381575 PIAS4Q8N2W9 510 aaPredicted RBP12.47□□□□□ -0.41
SHOX-202ENST00000381575 OR52E4Q8NGH9 312 aa12.47□□□□□ -0.41
SHOX-202ENST00000381575 PIGXQ8TBF5 258 aa12.47□□□□□ -0.41
SHOX-202ENST00000381575 TRNT1Q96Q11 434 aaKnown RBP12.47□□□□□ -0.41
SHOX-202ENST00000381575 C1QTNF6Q9BXI9 259 aa12.47□□□□□ -0.41
SHOX-202ENST00000381575 SLCO5A1Q9H2Y9 848 aa12.47□□□□□ -0.41
SHOX-202ENST00000381575 EXOSC3Q9NQT5 275 aaKnown RBP12.47□□□□□ -0.41
SHOX-202ENST00000381575 RLIMQ9NVW2 624 aa12.47□□□□□ -0.41
SHOX-202ENST00000381575 CISD1Q9NZ45 108 aaKnown RBP12.47□□□□□ -0.41
SHOX-202ENST00000381575 OSGIN1Q9UJX0 560 aa12.47□□□□□ -0.41
SHOX-202ENST00000381575 RAB21Q9UL25 225 aa12.47□□□□□ -0.41
SHOX-202ENST00000381575 HDGFL3Q9Y3E1 203 aa12.47□□□□□ -0.41
SHOX-202ENST00000381575 STAB1Q9NY15 2570 aa12.47□□□□□ -0.41
SHOX-202ENST00000381575 AGAP5A6NIR3 686 aa12.46□□□□□ -0.41
SHOX-202ENST00000381575 SNUPNO95149 360 aaKnown RBP12.46□□□□□ -0.41
SHOX-202ENST00000381575 GUSBP08236 651 aa12.46□□□□□ -0.41
SHOX-202ENST00000381575 ITGA5P08648 1049 aa12.46□□□□□ -0.41
SHOX-202ENST00000381575 RPS4Y1P22090 263 aaKnown RBP12.46□□□□□ -0.41
SHOX-202ENST00000381575 TACR3P29371 465 aa12.46□□□□□ -0.41
SHOX-202ENST00000381575 MAPK11Q15759 364 aa12.46□□□□□ -0.41
SHOX-202ENST00000381575 GTDC1Q4AE62 458 aa12.46□□□□□ -0.41
SHOX-202ENST00000381575 SLC9B1Q4ZJI4 515 aa12.46□□□□□ -0.41
SHOX-202ENST00000381575 RPS26P11Q5JNZ5 115 aaPredicted RBP12.46□□□□□ -0.41
SHOX-202ENST00000381575 LRRC74BQ6ZQY2 392 aa12.46□□□□□ -0.41
SHOX-202ENST00000381575 SPATA19Q7Z5L4 167 aa12.46□□□□□ -0.41
SHOX-202ENST00000381575 VRK2Q86Y07 508 aa12.46□□□□□ -0.41
SHOX-202ENST00000381575 TRIML2Q8N7C3 387 aa12.46□□□□□ -0.41
SHOX-202ENST00000381575 HTRA1Q92743 480 aa12.46□□□□□ -0.41
SHOX-202ENST00000381575 TRMT61AQ96FX7 289 aaKnown RBP12.46□□□□□ -0.41
SHOX-202ENST00000381575 AURKBQ96GD4 344 aaPredicted RBP12.46□□□□□ -0.41
SHOX-202ENST00000381575 ZBTB18Q99592 522 aa12.46□□□□□ -0.41
SHOX-202ENST00000381575 TRAF4Q9BUZ4 470 aaPredicted RBP12.46□□□□□ -0.41
SHOX-202ENST00000381575 TMEM181Q9P2C4 612 aa12.46□□□□□ -0.41
SHOX-202ENST00000381575 CUBNO60494 3623 aa12.46□□□□□ -0.42
SHOX-202ENST00000381575 M0R1B8 84 aa12.45□□□□□ -0.42
SHOX-202ENST00000381575 HDAC3O15379 428 aa12.45□□□□□ -0.42
SHOX-202ENST00000381575 TMCC2O75069 709 aa12.45□□□□□ -0.42
SHOX-202ENST00000381575 SNNO75324 88 aaPredicted RBP12.45□□□□□ -0.42
SHOX-202ENST00000381575 MRPL33O75394 65 aaKnown RBP12.45□□□□□ -0.42
SHOX-202ENST00000381575 PGM3O95394 542 aa12.45□□□□□ -0.42
SHOX-202ENST00000381575 ETFAP13804 333 aa12.45□□□□□ -0.42
SHOX-202ENST00000381575 IL7RP16871 459 aa12.45□□□□□ -0.42
SHOX-202ENST00000381575 POLR2HP52434 150 aaKnown RBP12.45□□□□□ -0.42
SHOX-202ENST00000381575 EPS8Q12929 822 aa12.45□□□□□ -0.42
SHOX-202ENST00000381575 BNIP2Q12982 314 aa12.45□□□□□ -0.42
SHOX-202ENST00000381575 PDK3Q15120 406 aa12.45□□□□□ -0.42
SHOX-202ENST00000381575 B3GLCTQ6Y288 498 aa12.45□□□□□ -0.42
SHOX-202ENST00000381575 ZNF836Q6ZNA1 936 aa12.45□□□□□ -0.42
SHOX-202ENST00000381575 MAVSQ7Z434 540 aa12.45□□□□□ -0.42
SHOX-202ENST00000381575 LRRC34Q8IZ02 419 aa12.45□□□□□ -0.42
SHOX-202ENST00000381575 KIRREL3Q8IZU9 778 aa12.45□□□□□ -0.42
SHOX-202ENST00000381575 OR9I1Q8NGQ6 314 aa12.45□□□□□ -0.42
SHOX-202ENST00000381575 OIT3Q8WWZ8 545 aa12.45□□□□□ -0.42
SHOX-202ENST00000381575 ALG2Q9H553 416 aa12.45□□□□□ -0.42
SHOX-202ENST00000381575 ASB6Q9NWX5 421 aa12.45□□□□□ -0.42
SHOX-202ENST00000381575 ADAM21Q9UKJ8 722 aa12.45□□□□□ -0.42
SHOX-202ENST00000381575 SLC25A15Q9Y619 301 aa12.45□□□□□ -0.42
SHOX-202ENST00000381575 CFAP73A6NFT4 308 aa12.44□□□□□ -0.42
SHOX-202ENST00000381575 E7EQL1 145 aa12.44□□□□□ -0.42
SHOX-202ENST00000381575 RFXANKO14593 260 aa12.44□□□□□ -0.42
SHOX-202ENST00000381575 GPR171O14626 319 aa12.44□□□□□ -0.42
SHOX-202ENST00000381575 BCHEP06276 602 aa12.44□□□□□ -0.42
SHOX-202ENST00000381575 SLC1A3P43003 542 aa12.44□□□□□ -0.42
SHOX-202ENST00000381575 MAGEA8P43361 318 aa12.44□□□□□ -0.42
SHOX-202ENST00000381575 SLC16A1P53985 500 aa12.44□□□□□ -0.42
SHOX-202ENST00000381575 H3F3AP84243 136 aa12.44□□□□□ -0.42
SHOX-202ENST00000381575 SLC25A3Q00325 362 aa12.44□□□□□ -0.42
SHOX-202ENST00000381575 AP1ARQ63HQ0 302 aa12.44□□□□□ -0.42
SHOX-202ENST00000381575 SLC22A25Q6T423 547 aa12.44□□□□□ -0.42
SHOX-202ENST00000381575 CMIPQ8IY22 773 aa12.44□□□□□ -0.42
SHOX-202ENST00000381575 CADM2Q8N3J6 435 aa12.44□□□□□ -0.42
SHOX-202ENST00000381575 DDIT4LQ96D03 193 aa12.44□□□□□ -0.42
SHOX-202ENST00000381575 HS6ST2Q96MM7 605 aa12.44□□□□□ -0.42
SHOX-202ENST00000381575 OR52B2Q96RD2 323 aa12.44□□□□□ -0.42
SHOX-202ENST00000381575 MDFIQ99750 246 aa12.44□□□□□ -0.42
SHOX-202ENST00000381575 USB1Q9BQ65 265 aaKnown RBP12.44□□□□□ -0.42
SHOX-202ENST00000381575 REG4Q9BYZ8 158 aa12.44□□□□□ -0.42
SHOX-202ENST00000381575 MTHFD2LQ9H903 347 aaPredicted RBP12.44□□□□□ -0.42
SHOX-202ENST00000381575 SLC7A10Q9NS82 523 aa12.44□□□□□ -0.42
SHOX-202ENST00000381575 THAP1Q9NVV9 213 aa12.44□□□□□ -0.42
SHOX-202ENST00000381575 TAS2R16Q9NYV7 291 aa12.44□□□□□ -0.42
SHOX-202ENST00000381575 MALT1Q9UDY8 824 aa12.44□□□□□ -0.42
SHOX-202ENST00000381575 POU2F3Q9UKI9 436 aa12.44□□□□□ -0.42
SHOX-202ENST00000381575 FLVCR1Q9Y5Y0 555 aa12.44□□□□□ -0.42
SHOX-202ENST00000381575 MALRD1Q5VYJ5 2156 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms