RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 AKT2P31751 481 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 NAA10P41227 235 aaPredicted RBP14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 FCRL6Q6DN72 434 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 OR2L13Q8N349 312 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 SLC44A3Q8N4M1 653 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 PTCHD1Q96NR3 888 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 EVA1BQ9NVM1 165 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 C2orf42Q9NWW7 574 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 CPNE7Q9UBL6 633 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 PHF11Q9UIL8 331 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 HPXP02790 462 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 MAOBP27338 520 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 ZSWIM7Q19AV6 140 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 PARGQ86W56 976 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 DERL3Q96Q80 235 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 B3GNT2Q9NY97 397 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 DENND4AQ7Z401 1863 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 A0A087WV48 116 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 FAM86C2PA6NEL3 165 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 FGF17O60258 216 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 MPC2O95563 127 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 NGFRP08138 427 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 PEPDP12955 493 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 ZNF250P15622 560 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 ZNF81P51508 661 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 TNFRSF17Q02223 184 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 DUSP8Q13202 625 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 TMEM255AQ5JRV8 349 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 DCST2Q5T1A1 773 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 SLC37A2Q8TED4 501 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 RSC1A1Q92681 617 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 KCTD12Q96CX2 325 aaKnown RBP14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 OR14A2Q96R54 314 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 TNFRSF13CQ96RJ3 184 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 PDCD1LG2Q9BQ51 273 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 KCMF1Q9P0J7 381 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 SEC16AO15027 2179 aa14.98□□□□□ -0.01
NKX3-1-201ENST00000380871 SLC22A31A6NKX4 558 aa14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 TFP02787 698 aa14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 ARFIP1P53367 373 aa14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 GSG1Q2KHT4 349 aa14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 LGALSLQ3ZCW2 172 aaPredicted RBP14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 DMKNQ6E0U4 476 aaPredicted RBP14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 SDR9C7Q8NEX9 313 aa14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 TOE1Q96GM8 510 aaKnown RBP14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 ST6GALNAC2Q9UJ37 374 aa14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 GXYLT2A0PJZ3 443 aa14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 PSMD9O00233 223 aa14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 ZNF593O00488 134 aaPredicted RBP14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 GPR171O14626 319 aa14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 RDH16O75452 317 aa14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 RAF1P04049 648 aa14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 SLC2A5P22732 501 aa14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 ZP1P60852 638 aa14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 CRYZQ08257 329 aaKnown RBP14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 GXYLT1Q4G148 440 aa14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 SFRP4Q6FHJ7 346 aaPredicted RBP14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 PIAS4Q8N2W9 510 aaPredicted RBP14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 ZNRF4Q8WWF5 429 aa14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 TTC9Q92623 222 aa14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 SLC22A18Q96BI1 424 aa14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 ZNF350Q9GZX5 532 aa14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 KRCC1Q9NPI7 259 aaPredicted RBP14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 LYARQ9NX58 379 aaKnown RBP14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 DAPP1Q9UN19 280 aa14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 LRRN3E7EW58 273 aa14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 CFDP00746 253 aaPredicted RBP14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 PTHLHP12272 177 aa14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 GARNL3Q5VVW2 1013 aa14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 ZNF782Q6ZMW2 699 aaPredicted RBP14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 COX18Q8N8Q8 333 aa14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 OR9A4Q8NGU2 314 aa14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 CEP76Q8TAP6 659 aa14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 ZFYVE21Q9BQ24 234 aa14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 ZNF559Q9BR84 538 aa14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 LRRN3Q9H3W5 708 aa14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 EMC7Q9NPA0 242 aa14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 GLTPQ9NZD2 209 aa14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 NUBP2Q9Y5Y2 271 aa14.97□□□□□ -0.01
NKX3-1-201ENST00000380871 PRR19A6NJB7 356 aa14.96□□□□□ -0.01
NKX3-1-201ENST00000380871 RIIAD1A6NNX1 92 aa14.96□□□□□ -0.01
NKX3-1-201ENST00000380871 SSNA1O43805 119 aa14.96□□□□□ -0.01
NKX3-1-201ENST00000380871 GMDSO60547 372 aa14.96□□□□□ -0.01
NKX3-1-201ENST00000380871 EPXP11678 715 aa14.96□□□□□ -0.01
NKX3-1-201ENST00000380871 BMP8BP34820 402 aa14.96□□□□□ -0.01
NKX3-1-201ENST00000380871 LTBRP36941 435 aa14.96□□□□□ -0.01
NKX3-1-201ENST00000380871 PSMB10P40306 273 aa14.96□□□□□ -0.01
NKX3-1-201ENST00000380871 SELENOPP49908 381 aa14.96□□□□□ -0.01
NKX3-1-201ENST00000380871 RAB30Q15771 203 aa14.96□□□□□ -0.01
NKX3-1-201ENST00000380871 BMP8AQ7Z5Y6 402 aa14.96□□□□□ -0.01
NKX3-1-201ENST00000380871 ZNF619Q8N2I2 560 aa14.96□□□□□ -0.01
NKX3-1-201ENST00000380871 LGALS14Q8TCE9 139 aa14.96□□□□□ -0.01
NKX3-1-201ENST00000380871 RELTQ969Z4 430 aa14.96□□□□□ -0.01
NKX3-1-201ENST00000380871 HCN3Q9P1Z3 774 aa14.96□□□□□ -0.01
NKX3-1-201ENST00000380871 TICRRQ7Z2Z1 1910 aa14.96□□□□□ -0.01
NKX3-1-201ENST00000380871 TP53BP1Q12888 1972 aaPredicted RBP14.96□□□□□ -0.01
NKX3-1-201ENST00000380871 LOC105371267A0A1B0GV96 52 aa14.96□□□□□ -0.02
NKX3-1-201ENST00000380871 KCNJ13O60928 360 aa14.96□□□□□ -0.02
NKX3-1-201ENST00000380871 NID1P14543 1247 aa14.96□□□□□ -0.02
NKX3-1-201ENST00000380871 GABRA3P34903 492 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms