RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 A0A1W2PNR3 127 aa16.89■□□□□ 0.3
SMN2-202ENST00000380742 EIF4E1BA6NMX2 242 aaKnown RBP16.89■□□□□ 0.3
SMN2-202ENST00000380742 NPIPB7O75200 414 aa16.89■□□□□ 0.3
SMN2-202ENST00000380742 TIPRLO75663 272 aa16.89■□□□□ 0.3
SMN2-202ENST00000380742 TFPIP10646 304 aa16.89■□□□□ 0.3
SMN2-202ENST00000380742 FKBP2P26885 142 aaKnown RBP16.89■□□□□ 0.3
SMN2-202ENST00000380742 RRM2P31350 389 aa16.89■□□□□ 0.3
SMN2-202ENST00000380742 SPIBQ01892 262 aa16.89■□□□□ 0.3
SMN2-202ENST00000380742 GXYLT1Q4G148 440 aa16.89■□□□□ 0.3
SMN2-202ENST00000380742 EMC4Q5J8M3 183 aa16.89■□□□□ 0.3
SMN2-202ENST00000380742 ESPNLQ6ZVH7 1005 aa16.89■□□□□ 0.3
SMN2-202ENST00000380742 OR5M9Q8NGP3 310 aa16.89■□□□□ 0.3
SMN2-202ENST00000380742 OR52J3Q8NH60 311 aa16.89■□□□□ 0.3
SMN2-202ENST00000380742 FAM57AQ8TBR7 257 aa16.89■□□□□ 0.3
SMN2-202ENST00000380742 STK35Q8TDR2 534 aa16.89■□□□□ 0.3
SMN2-202ENST00000380742 DDIT4LQ96D03 193 aa16.89■□□□□ 0.3
SMN2-202ENST00000380742 OR5B2Q96R09 309 aa16.89■□□□□ 0.3
SMN2-202ENST00000380742 TMEM43Q9BTV4 400 aa16.89■□□□□ 0.3
SMN2-202ENST00000380742 COQ10BQ9H8M1 238 aa16.89■□□□□ 0.3
SMN2-202ENST00000380742 PNPLA3Q9NST1 481 aa16.89■□□□□ 0.3
SMN2-202ENST00000380742 AP4S1Q9Y587 144 aa16.89■□□□□ 0.3
SMN2-202ENST00000380742 A0A1W2PRQ8 180 aa16.89■□□□□ 0.29
SMN2-202ENST00000380742 GJE1A6NN92 205 aa16.89■□□□□ 0.29
SMN2-202ENST00000380742 EIF1AYO14602 144 aaKnown RBP16.89■□□□□ 0.29
SMN2-202ENST00000380742 TNFSF11O14788 317 aa16.89■□□□□ 0.29
SMN2-202ENST00000380742 BCKDKO14874 412 aa16.89■□□□□ 0.29
SMN2-202ENST00000380742 ADAMDEC1O15204 470 aa16.89■□□□□ 0.29
SMN2-202ENST00000380742 TPOP07202 933 aa16.89■□□□□ 0.29
SMN2-202ENST00000380742 ABOP16442 354 aa16.89■□□□□ 0.29
SMN2-202ENST00000380742 CLK1P49759 484 aaKnown RBP16.89■□□□□ 0.29
SMN2-202ENST00000380742 UGT2B15P54855 530 aa16.89■□□□□ 0.29
SMN2-202ENST00000380742 LSM11P83369 360 aaKnown RBP eCLIP16.89■□□□□ 0.29
SMN2-202ENST00000380742 MYBPHQ13203 477 aa16.89■□□□□ 0.29
SMN2-202ENST00000380742 DGCR6Q14129 220 aa16.89■□□□□ 0.29
SMN2-202ENST00000380742 WLSQ5T9L3 541 aa16.89■□□□□ 0.29
SMN2-202ENST00000380742 OR2T5Q6IEZ7 315 aa16.89■□□□□ 0.29
SMN2-202ENST00000380742 TTC33Q6PID6 262 aaPredicted RBP16.89■□□□□ 0.29
SMN2-202ENST00000380742 MEIOBQ8N635 442 aa16.89■□□□□ 0.29
SMN2-202ENST00000380742 OR2T29Q8NH02 315 aa16.89■□□□□ 0.29
SMN2-202ENST00000380742 SLC7A13Q8TCU3 470 aa16.89■□□□□ 0.29
SMN2-202ENST00000380742 KTI12Q96EK9 354 aaPredicted RBP16.89■□□□□ 0.29
SMN2-202ENST00000380742 FUZQ9BT04 418 aa16.89■□□□□ 0.29
SMN2-202ENST00000380742 POTEKPQ9BYX7 375 aa16.89■□□□□ 0.29
SMN2-202ENST00000380742 ANKRD19PQ9H560 264 aa16.89■□□□□ 0.29
SMN2-202ENST00000380742 YY1AP1Q9H869 796 aa16.89■□□□□ 0.29
SMN2-202ENST00000380742 VNN3Q9NY84 501 aa16.89■□□□□ 0.29
SMN2-202ENST00000380742 TRBV4-1A0A0J9YWV2 114 aa16.88■□□□□ 0.29
SMN2-202ENST00000380742 H3BNX3 289 aa16.88■□□□□ 0.29
SMN2-202ENST00000380742 GADD45GO95257 159 aa16.88■□□□□ 0.29
SMN2-202ENST00000380742 CST1P01037 141 aa16.88■□□□□ 0.29
SMN2-202ENST00000380742 IMPDH2P12268 514 aa16.88■□□□□ 0.29
SMN2-202ENST00000380742 RBM34P42696 430 aaKnown RBP16.88■□□□□ 0.29
SMN2-202ENST00000380742 PPP1R8Q12972 351 aaKnown RBP16.88■□□□□ 0.29
SMN2-202ENST00000380742 IGFBP7Q16270 282 aa16.88■□□□□ 0.29
SMN2-202ENST00000380742 C1orf140Q5VVS0 124 aa16.88■□□□□ 0.29
SMN2-202ENST00000380742 TBPL2Q6SJ96 375 aa16.88■□□□□ 0.29
SMN2-202ENST00000380742 Q6ZPB1 254 aaPredicted RBP16.88■□□□□ 0.29
SMN2-202ENST00000380742 CD163Q86VB7 1156 aa16.88■□□□□ 0.29
SMN2-202ENST00000380742 PM20D2Q8IYS1 436 aa16.88■□□□□ 0.29
SMN2-202ENST00000380742 OR2V1Q8NHB1 315 aa16.88■□□□□ 0.29
SMN2-202ENST00000380742 TMEM239Q8WW34 195 aa16.88■□□□□ 0.29
SMN2-202ENST00000380742 ACOT11Q8WXI4 607 aaPredicted RBP16.88■□□□□ 0.29
SMN2-202ENST00000380742 PTDSS2Q9BVG9 487 aa16.88■□□□□ 0.29
SMN2-202ENST00000380742 MEPEQ9NQ76 525 aaPredicted RBP16.88■□□□□ 0.29
SMN2-202ENST00000380742 HDGFL3Q9Y3E1 203 aa16.88■□□□□ 0.29
SMN2-202ENST00000380742 LYVE1Q9Y5Y7 322 aa16.88■□□□□ 0.29
SMN2-202ENST00000380742 A0A087WUU8 490 aa16.87■□□□□ 0.29
SMN2-202ENST00000380742 H0Y3Z8 333 aa16.87■□□□□ 0.29
SMN2-202ENST00000380742 KPNA4O00629 521 aaPredicted RBP16.87■□□□□ 0.29
SMN2-202ENST00000380742 PIP5K1CO60331 668 aa16.87■□□□□ 0.29
SMN2-202ENST00000380742 SLC19A2O60779 497 aa16.87■□□□□ 0.29
SMN2-202ENST00000380742 RPS5P46782 204 aaKnown RBP16.87■□□□□ 0.29
SMN2-202ENST00000380742 LIMS1P48059 325 aa16.87■□□□□ 0.29
SMN2-202ENST00000380742 HMGA2P52926 109 aa16.87■□□□□ 0.29
SMN2-202ENST00000380742 SMIM11AP58511 58 aa16.87■□□□□ 0.29
SMN2-202ENST00000380742 RBPJQ06330 500 aa16.87■□□□□ 0.29
SMN2-202ENST00000380742 MRPL49Q13405 166 aaKnown RBP16.87■□□□□ 0.29
SMN2-202ENST00000380742 SEC23BQ15437 767 aa16.87■□□□□ 0.29
SMN2-202ENST00000380742 FGD3Q5JSP0 725 aa16.87■□□□□ 0.29
SMN2-202ENST00000380742 HBMQ6B0K9 141 aa16.87■□□□□ 0.29
SMN2-202ENST00000380742 PODNL1Q6PEZ8 512 aa16.87■□□□□ 0.29
SMN2-202ENST00000380742 TMPPEQ6ZT21 453 aa16.87■□□□□ 0.29
SMN2-202ENST00000380742 OR4C15Q8NGM1 316 aa16.87■□□□□ 0.29
SMN2-202ENST00000380742 OR10D3Q8NH80 312 aa16.87■□□□□ 0.29
SMN2-202ENST00000380742 PFN4Q8NHR9 129 aa16.87■□□□□ 0.29
SMN2-202ENST00000380742 PHF3Q92576 2039 aaKnown RBP16.87■□□□□ 0.29
SMN2-202ENST00000380742 TAAR8Q969N4 342 aa16.87■□□□□ 0.29
SMN2-202ENST00000380742 ZNF845Q96IR2 970 aaPredicted RBP16.87■□□□□ 0.29
SMN2-202ENST00000380742 HS6ST2Q96MM7 605 aa16.87■□□□□ 0.29
SMN2-202ENST00000380742 TUBA1CQ9BQE3 449 aa16.87■□□□□ 0.29
SMN2-202ENST00000380742 ALKBH4Q9NXW9 302 aa16.87■□□□□ 0.29
SMN2-202ENST00000380742 TRAV36DV7A0A075B6V5 113 aa16.86■□□□□ 0.29
SMN2-202ENST00000380742 HNRNPRO43390 633 aaKnown RBP16.86■□□□□ 0.29
SMN2-202ENST00000380742 CXCL13O43927 109 aa16.86■□□□□ 0.29
SMN2-202ENST00000380742 KRT36O76013 467 aa16.86■□□□□ 0.29
SMN2-202ENST00000380742 IDUAP35475 653 aa16.86■□□□□ 0.29
SMN2-202ENST00000380742 EIF1AXP47813 144 aaKnown RBP16.86■□□□□ 0.29
SMN2-202ENST00000380742 DIO1P49895 249 aa16.86■□□□□ 0.29
SMN2-202ENST00000380742 CARD18P57730 90 aa16.86■□□□□ 0.29
SMN2-202ENST00000380742 EXOC3L2Q2M3D2 409 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms