RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 TRPV4Q9HBA0 871 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 SERINC1Q9NRX5 453 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 SLC6A13Q9NSD5 602 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 RBM22Q9NW64 420 aaKnown RBP eCLIP8.69□□□□□ -1.02
PTPRA-204ENST00000380393 TMEM45AQ9NWC5 275 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 ELOVL2Q9NXB9 296 aa8.69□□□□□ -1.02
PTPRA-204ENST00000380393 RPL36Q9Y3U8 105 aaKnown RBP8.69□□□□□ -1.02
PTPRA-204ENST00000380393 TBC1D3KA0A087X1G2 549 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 A0A0D9SG52 128 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 C2orf78A6NCI8 922 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 SH3BGRLO75368 114 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 SPARCP09486 303 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 GABRA5P31644 462 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 APLNRP35414 380 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 VMACQ2NL98 169 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 GLT8D1Q68CQ7 371 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 S100A7AQ86SG5 101 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 CALHM3Q86XJ0 350 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 STK40Q8N2I9 435 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 OR52B6Q8NGF0 335 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 OR10R2Q8NGX6 335 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 TERB2Q8NHR7 220 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 GPR148Q8TDV2 347 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 OTUB2Q96DC9 234 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 FCRL4Q96PJ5 515 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 TM6SF2Q9BZW4 377 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 BHLHE41Q9C0J9 482 aaPredicted RBP8.68□□□□□ -1.02
PTPRA-204ENST00000380393 DNAJC4Q9NNZ3 241 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 FAM120CQ9NX05 1096 aaKnown RBP8.68□□□□□ -1.02
PTPRA-204ENST00000380393 SPG21Q9NZD8 308 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 GPR34Q9UPC5 381 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 SF3B6Q9Y3B4 125 aaKnown RBP8.68□□□□□ -1.02
PTPRA-204ENST00000380393 KIAA0100Q14667 2235 aaKnown RBP8.68□□□□□ -1.02
PTPRA-204ENST00000380393 LNP1A1A4G5 178 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 ZBTB42B2RXF5 422 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 M0R036 132 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 KERAO60938 352 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 RGS9O75916 674 aaPredicted RBP8.68□□□□□ -1.02
PTPRA-204ENST00000380393 RLN1P04808 185 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 ARG1P05089 322 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 LGALS2P05162 132 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 PIRTP0C851 137 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 ZNF865P0CJ78 1059 aaPredicted RBP8.68□□□□□ -1.02
PTPRA-204ENST00000380393 INSRRP14616 1297 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 WNT3P56703 355 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 ABHD18Q0P651 414 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 ZNF626Q68DY1 528 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 TTLL10Q6ZVT0 673 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 SLC16A14Q7RTX9 510 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 OR2A12Q8NGT7 310 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 TM4SF18Q96CE8 201 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 PHYHIPLQ96FC7 376 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 OR52E6Q96RD3 313 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 TMEM106CQ9BVX2 250 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 UBQLN3Q9H347 655 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 KLK14Q9P0G3 267 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 RAI2Q9Y5P3 530 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 PLXNA1Q9UIW2 1896 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 TRDV1A0A1B0GX56 115 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 C7orf77A4D0Y5 90 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 CD8B2A6NJW9 211 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 ZNF705GA8MUZ8 300 aaPredicted RBP8.68□□□□□ -1.02
PTPRA-204ENST00000380393 LRRN3E7EW58 273 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 SUV39H1O43463 412 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 UROSP10746 265 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 CD8BP10966 210 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 SUCLG1P53597 346 aaKnown RBP8.68□□□□□ -1.02
PTPRA-204ENST00000380393 CDH11P55287 796 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 CDH12P55289 794 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 WNT4P56705 351 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 INSL4Q14641 139 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 LEMD1Q68G75 181 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 KCTD11Q693B1 232 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 SSX7Q7RTT5 188 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 BCDIN3DQ7Z5W3 292 aaKnown RBP8.68□□□□□ -1.02
PTPRA-204ENST00000380393 HSD17B11Q8NBQ5 300 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 CLP1Q92989 425 aaKnown RBP8.68□□□□□ -1.02
PTPRA-204ENST00000380393 OSMRQ99650 979 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 VPS25Q9BRG1 176 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 POTEKPQ9BYX7 375 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 LRRN3Q9H3W5 708 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 SPHK2Q9NRA0 654 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 NME7Q9Y5B8 376 aa8.68□□□□□ -1.02
PTPRA-204ENST00000380393 TLR4O00206 839 aa8.67□□□□□ -1.02
PTPRA-204ENST00000380393 NDUFS8O00217 210 aa8.67□□□□□ -1.02
PTPRA-204ENST00000380393 MBPP02686 304 aaPredicted RBP8.67□□□□□ -1.02
PTPRA-204ENST00000380393 SOD3P08294 240 aa8.67□□□□□ -1.02
PTPRA-204ENST00000380393 KDELR2P33947 212 aa8.67□□□□□ -1.02
PTPRA-204ENST00000380393 UBE2MP61081 183 aaKnown RBP8.67□□□□□ -1.02
PTPRA-204ENST00000380393 SPIBQ01892 262 aa8.67□□□□□ -1.02
PTPRA-204ENST00000380393 PJVKQ0ZLH3 352 aa8.67□□□□□ -1.02
PTPRA-204ENST00000380393 ABLIM2Q6H8Q1 611 aa8.67□□□□□ -1.02
PTPRA-204ENST00000380393 TMEM207Q6UWW9 146 aa8.67□□□□□ -1.02
PTPRA-204ENST00000380393 ANGPTL5Q86XS5 388 aa8.67□□□□□ -1.02
PTPRA-204ENST00000380393 GID4Q8IVV7 300 aa8.67□□□□□ -1.02
PTPRA-204ENST00000380393 GLB1L2Q8IW92 636 aa8.67□□□□□ -1.02
PTPRA-204ENST00000380393 LAS2Q8IYD9 372 aa8.67□□□□□ -1.02
PTPRA-204ENST00000380393 SPPL2AQ8TCT8 520 aa8.67□□□□□ -1.02
PTPRA-204ENST00000380393 OR8D1Q8WZ84 308 aa8.67□□□□□ -1.02
PTPRA-204ENST00000380393 PACRGQ96M98 296 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms