RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 DCLRE1CQ96SD1 692 aaKnown RBP13.64□□□□□ -0.23
PRNP-201ENST00000379440 LIN7BQ9HAP6 207 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 MCCC2Q9HCC0 563 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 CMC2Q9NRP2 79 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 RPS6KB2Q9UBS0 482 aa13.64□□□□□ -0.23
PRNP-201ENST00000379440 FAM86C2PA6NEL3 165 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 J3QRE1 110 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 BET1O15155 118 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 RGS5O15539 181 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 PAICSP22234 425 aaKnown RBP13.63□□□□□ -0.23
PRNP-201ENST00000379440 SLC37A1P57057 533 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 GPR85P60893 370 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 STEAP3Q658P3 488 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 DESI1Q6ICB0 168 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 CCDC190Q86UF4 302 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 KLHL36Q8N4N3 616 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 TMEM99Q8N816 258 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 OR5H6Q8NGV6 325 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 LHFPL5Q8TAF8 219 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 SMAP2Q8WU79 429 aaPredicted RBP13.63□□□□□ -0.23
PRNP-201ENST00000379440 KISS1RQ969F8 398 aaPredicted RBP13.63□□□□□ -0.23
PRNP-201ENST00000379440 CLDN23Q96B33 292 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 ART5Q96L15 291 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 FN3KQ9H479 309 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 SMURF1Q9HCE7 757 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 ISYNA1Q9NPH2 558 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 PRODH2Q9UF12 536 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 UGT2A1Q9Y4X1 527 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 HEATR5AQ86XA9 2040 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 A0A075B6Q4 140 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 C12orf71A8MTZ7 269 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 PRR23D1E9PI22 279 aaPredicted RBP13.63□□□□□ -0.23
PRNP-201ENST00000379440 PRR23D2P0DMB1 279 aaPredicted RBP13.63□□□□□ -0.23
PRNP-201ENST00000379440 CD53P19397 219 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 CELP19835 753 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 TNFSF8P32971 234 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 SDC2P34741 201 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 RPS7P62081 194 aaKnown RBP13.63□□□□□ -0.23
PRNP-201ENST00000379440 CRMP1Q14194 572 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 INSL4Q14641 139 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 CDK10Q15131 360 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 C1orf189Q5VU69 101 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 RPL13AP3Q6NVV1 102 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 KLBQ86Z14 1044 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 GID4Q8IVV7 300 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 GALNT11Q8NCW6 608 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 INTS12Q96CB8 462 aaKnown RBP13.63□□□□□ -0.23
PRNP-201ENST00000379440 DEPDC7Q96QD5 511 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 CDX2Q99626 313 aaPredicted RBP13.63□□□□□ -0.23
PRNP-201ENST00000379440 TMED9Q9BVK6 235 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 NXF5Q9H1B4 397 aaKnown RBP13.63□□□□□ -0.23
PRNP-201ENST00000379440 EVA1AQ9H8M9 152 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 GMEB2Q9UKD1 530 aa13.63□□□□□ -0.23
PRNP-201ENST00000379440 COLQQ9Y215 455 aaPredicted RBP13.63□□□□□ -0.23
PRNP-201ENST00000379440 SLC30A4O14863 429 aa13.62□□□□□ -0.23
PRNP-201ENST00000379440 OIP5O43482 229 aa13.62□□□□□ -0.23
PRNP-201ENST00000379440 DUX1O43812 170 aa13.62□□□□□ -0.23
PRNP-201ENST00000379440 GYPBP06028 91 aa13.62□□□□□ -0.23
PRNP-201ENST00000379440 MRPL3P09001 348 aaKnown RBP13.62□□□□□ -0.23
PRNP-201ENST00000379440 GLB1P16278 677 aa13.62□□□□□ -0.23
PRNP-201ENST00000379440 CASP3P42574 277 aa13.62□□□□□ -0.23
PRNP-201ENST00000379440 RBM34P42696 430 aaKnown RBP13.62□□□□□ -0.23
PRNP-201ENST00000379440 PSMD4P55036 377 aaKnown RBP13.62□□□□□ -0.23
PRNP-201ENST00000379440 CD226Q15762 336 aa13.62□□□□□ -0.23
PRNP-201ENST00000379440 CARTPTQ16568 116 aa13.62□□□□□ -0.23
PRNP-201ENST00000379440 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.62□□□□□ -0.23
PRNP-201ENST00000379440 KLHL26Q53HC5 615 aa13.62□□□□□ -0.23
PRNP-201ENST00000379440 SPANXN2Q5MJ10 180 aa13.62□□□□□ -0.23
PRNP-201ENST00000379440 PLXDC1Q8IUK5 500 aa13.62□□□□□ -0.23
PRNP-201ENST00000379440 OR4C6Q8NH72 309 aa13.62□□□□□ -0.23
PRNP-201ENST00000379440 TEAD3Q99594 435 aa13.62□□□□□ -0.23
PRNP-201ENST00000379440 TP53BP1Q12888 1972 aaPredicted RBP13.62□□□□□ -0.23
PRNP-201ENST00000379440 NDUFA2O43678 99 aa13.62□□□□□ -0.23
PRNP-201ENST00000379440 SULT1B1O43704 296 aa13.62□□□□□ -0.23
PRNP-201ENST00000379440 GABRA5P31644 462 aa13.62□□□□□ -0.23
PRNP-201ENST00000379440 GALNSP34059 522 aa13.62□□□□□ -0.23
PRNP-201ENST00000379440 ZNF322Q6U7Q0 402 aaPredicted RBP13.62□□□□□ -0.23
PRNP-201ENST00000379440 APOOLQ6UXV4 268 aa13.62□□□□□ -0.23
PRNP-201ENST00000379440 RTL4Q6ZR62 310 aa13.62□□□□□ -0.23
PRNP-201ENST00000379440 QSOX2Q6ZRP7 698 aa13.62□□□□□ -0.23
PRNP-201ENST00000379440 PRR22Q8IZ63 422 aa13.62□□□□□ -0.23
PRNP-201ENST00000379440 TIMP4Q99727 224 aa13.62□□□□□ -0.23
PRNP-201ENST00000379440 USB1Q9BQ65 265 aaKnown RBP13.62□□□□□ -0.23
PRNP-201ENST00000379440 PELOQ9BRX2 385 aaKnown RBP13.62□□□□□ -0.23
PRNP-201ENST00000379440 HDHD5Q9BXW7 423 aa13.62□□□□□ -0.23
PRNP-201ENST00000379440 NRSN2Q9GZP1 204 aa13.62□□□□□ -0.23
PRNP-201ENST00000379440 EMC3Q9P0I2 261 aa13.62□□□□□ -0.23
PRNP-201ENST00000379440 PCDHGB6Q9Y5F9 930 aa13.62□□□□□ -0.23
PRNP-201ENST00000379440 RP1P56715 2156 aa13.62□□□□□ -0.23
PRNP-201ENST00000379440 CACNA1IQ9P0X4 2223 aa13.62□□□□□ -0.23
PRNP-201ENST00000379440 CDC14CA4D256 554 aa13.61□□□□□ -0.23
PRNP-201ENST00000379440 CCDC182A6NF36 153 aa13.61□□□□□ -0.23
PRNP-201ENST00000379440 ERVH48-1M5A8F1 160 aa13.61□□□□□ -0.23
PRNP-201ENST00000379440 FOXL2P58012 376 aa13.61□□□□□ -0.23
PRNP-201ENST00000379440 HNRNPA0Q13151 305 aaKnown RBP13.61□□□□□ -0.23
PRNP-201ENST00000379440 GXYLT1Q4G148 440 aa13.61□□□□□ -0.23
PRNP-201ENST00000379440 CBLN3Q6UW01 205 aa13.61□□□□□ -0.23
PRNP-201ENST00000379440 LYPD8Q6UX82 237 aa13.61□□□□□ -0.23
PRNP-201ENST00000379440 D2HGDHQ8N465 521 aa13.61□□□□□ -0.23
PRNP-201ENST00000379440 ARL6IP6Q8N6S5 226 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms