RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 LOC390937A0A1W2PQ73 354 aa15.52■□□□□ 0.08
PDLIM4-202ENST00000379018 PDLIM1O00151 329 aa15.52■□□□□ 0.08
PDLIM4-202ENST00000379018 WIPF1O43516 503 aa15.52■□□□□ 0.08
PDLIM4-202ENST00000379018 WNT11O96014 354 aa15.52■□□□□ 0.08
PDLIM4-202ENST00000379018 ZNF23P17027 643 aa15.52■□□□□ 0.08
PDLIM4-202ENST00000379018 CRHR1P34998 444 aa15.52■□□□□ 0.08
PDLIM4-202ENST00000379018 SLC16A1P53985 500 aa15.52■□□□□ 0.08
PDLIM4-202ENST00000379018 TGFBR3Q03167 851 aa15.52■□□□□ 0.08
PDLIM4-202ENST00000379018 PCLAFQ15004 111 aa15.52■□□□□ 0.08
PDLIM4-202ENST00000379018 ATP6AP1LQ52LC2 224 aa15.52■□□□□ 0.08
PDLIM4-202ENST00000379018 IL23RQ5VWK5 629 aa15.52■□□□□ 0.08
PDLIM4-202ENST00000379018 BHLHB9Q6PI77 547 aa15.52■□□□□ 0.08
PDLIM4-202ENST00000379018 C12orf54Q6X4T0 127 aa15.52■□□□□ 0.08
PDLIM4-202ENST00000379018 C6orf120Q7Z4R8 191 aa15.52■□□□□ 0.08
PDLIM4-202ENST00000379018 GSPT2Q8IYD1 628 aaKnown RBP15.52■□□□□ 0.08
PDLIM4-202ENST00000379018 CLECL1Q8IZS7 167 aa15.52■□□□□ 0.08
PDLIM4-202ENST00000379018 C17orf78Q8N4C9 275 aa15.52■□□□□ 0.08
PDLIM4-202ENST00000379018 FNDC5Q8NAU1 212 aa15.52■□□□□ 0.08
PDLIM4-202ENST00000379018 MNS1Q8NEH6 495 aa15.52■□□□□ 0.08
PDLIM4-202ENST00000379018 PRPF18Q99633 342 aaKnown RBP15.52■□□□□ 0.08
PDLIM4-202ENST00000379018 DUSP26Q9BV47 211 aa15.52■□□□□ 0.08
PDLIM4-202ENST00000379018 OR51I1Q9H343 314 aa15.52■□□□□ 0.08
PDLIM4-202ENST00000379018 DCTN4Q9UJW0 460 aa15.52■□□□□ 0.08
PDLIM4-202ENST00000379018 SLC9A8Q9Y2E8 581 aa15.52■□□□□ 0.08
PDLIM4-202ENST00000379018 HDGFL3Q9Y3E1 203 aa15.52■□□□□ 0.08
PDLIM4-202ENST00000379018 FLVCR1Q9Y5Y0 555 aa15.52■□□□□ 0.08
PDLIM4-202ENST00000379018 ANKRD28O15084 1053 aa15.51■□□□□ 0.07
PDLIM4-202ENST00000379018 DNAJA2O60884 412 aa15.51■□□□□ 0.07
PDLIM4-202ENST00000379018 AK1P00568 194 aa15.51■□□□□ 0.07
PDLIM4-202ENST00000379018 PGM1P36871 562 aa15.51■□□□□ 0.07
PDLIM4-202ENST00000379018 SERPINF1P36955 418 aa15.51■□□□□ 0.07
PDLIM4-202ENST00000379018 TNFAIP8L2Q6P589 184 aaPredicted RBP15.51■□□□□ 0.07
PDLIM4-202ENST00000379018 RINLQ6ZS11 566 aa15.51■□□□□ 0.07
PDLIM4-202ENST00000379018 RNF165Q6ZSG1 346 aa15.51■□□□□ 0.07
PDLIM4-202ENST00000379018 GRINAQ7Z429 371 aa15.51■□□□□ 0.07
PDLIM4-202ENST00000379018 ADGRG3Q86Y34 549 aa15.51■□□□□ 0.07
PDLIM4-202ENST00000379018 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.51■□□□□ 0.07
PDLIM4-202ENST00000379018 C1orf162Q8NEQ5 155 aaPredicted RBP15.51■□□□□ 0.07
PDLIM4-202ENST00000379018 RAB8BQ92930 207 aa15.51■□□□□ 0.07
PDLIM4-202ENST00000379018 PLA2G12AQ9BZM1 189 aa15.51■□□□□ 0.07
PDLIM4-202ENST00000379018 ZNF350Q9GZX5 532 aa15.51■□□□□ 0.07
PDLIM4-202ENST00000379018 TMEM181Q9P2C4 612 aa15.51■□□□□ 0.07
PDLIM4-202ENST00000379018 DUXAA6NLW8 204 aa15.5■□□□□ 0.07
PDLIM4-202ENST00000379018 CLDN24A6NM45 220 aa15.5■□□□□ 0.07
PDLIM4-202ENST00000379018 TRIM13O60858 407 aa15.5■□□□□ 0.07
PDLIM4-202ENST00000379018 KRT33AO76009 404 aa15.5■□□□□ 0.07
PDLIM4-202ENST00000379018 SHBGP04278 402 aa15.5■□□□□ 0.07
PDLIM4-202ENST00000379018 OR12D1P0DN82 309 aa15.5■□□□□ 0.07
PDLIM4-202ENST00000379018 MPGP29372 298 aa15.5■□□□□ 0.07
PDLIM4-202ENST00000379018 IL2RGP31785 369 aa15.5■□□□□ 0.07
PDLIM4-202ENST00000379018 IDH2P48735 452 aaKnown RBP15.5■□□□□ 0.07
PDLIM4-202ENST00000379018 TUBA1BP68363 451 aa15.5■□□□□ 0.07
PDLIM4-202ENST00000379018 TUBA4AP68366 448 aa15.5■□□□□ 0.07
PDLIM4-202ENST00000379018 ARHGAP11BQ3KRB8 267 aa15.5■□□□□ 0.07
PDLIM4-202ENST00000379018 UGT3A2Q3SY77 523 aa15.5■□□□□ 0.07
PDLIM4-202ENST00000379018 EMBQ6PCB8 327 aa15.5■□□□□ 0.07
PDLIM4-202ENST00000379018 TUBA1AQ71U36 451 aa15.5■□□□□ 0.07
PDLIM4-202ENST00000379018 RFLNBQ8N5W9 214 aa15.5■□□□□ 0.07
PDLIM4-202ENST00000379018 XAGE5Q8WWM1 108 aa15.5■□□□□ 0.07
PDLIM4-202ENST00000379018 C3orf30Q96M34 536 aa15.5■□□□□ 0.07
PDLIM4-202ENST00000379018 NAA11Q9BSU3 229 aaPredicted RBP15.5■□□□□ 0.07
PDLIM4-202ENST00000379018 BHLHE41Q9C0J9 482 aaPredicted RBP15.5■□□□□ 0.07
PDLIM4-202ENST00000379018 MYOZ1Q9NP98 299 aaPredicted RBP15.5■□□□□ 0.07
PDLIM4-202ENST00000379018 CA10Q9NS85 328 aa15.5■□□□□ 0.07
PDLIM4-202ENST00000379018 EXD2Q9NVH0 621 aa15.5■□□□□ 0.07
PDLIM4-202ENST00000379018 PARPBPQ9NWS1 579 aa15.5■□□□□ 0.07
PDLIM4-202ENST00000379018 MID2Q9UJV3 735 aa15.5■□□□□ 0.07
PDLIM4-202ENST00000379018 SLC35A3Q9Y2D2 325 aa15.5■□□□□ 0.07
PDLIM4-202ENST00000379018 WDR45Q9Y484 360 aa15.5■□□□□ 0.07
PDLIM4-202ENST00000379018 DYSFO75923 2080 aa15.49■□□□□ 0.07
PDLIM4-202ENST00000379018 TMED7-TICAM2A0A0A6YYA0 188 aa15.49■□□□□ 0.07
PDLIM4-202ENST00000379018 IGHV1-18A0A0C4DH31 117 aa15.49■□□□□ 0.07
PDLIM4-202ENST00000379018 TMEM72A0PK05 275 aa15.49■□□□□ 0.07
PDLIM4-202ENST00000379018 DNPH1O43598 174 aa15.49■□□□□ 0.07
PDLIM4-202ENST00000379018 LYPLA1O75608 230 aaPredicted RBP15.49■□□□□ 0.07
PDLIM4-202ENST00000379018 OR4A8P0C604 315 aa15.49■□□□□ 0.07
PDLIM4-202ENST00000379018 KRT4P19013 534 aa15.49■□□□□ 0.07
PDLIM4-202ENST00000379018 APEX1P27695 318 aaKnown RBP15.49■□□□□ 0.07
PDLIM4-202ENST00000379018 SLC35A1P78382 337 aa15.49■□□□□ 0.07
PDLIM4-202ENST00000379018 ATAD3BQ5T9A4 648 aa15.49■□□□□ 0.07
PDLIM4-202ENST00000379018 OR4F3Q6IEY1 312 aa15.49■□□□□ 0.07
PDLIM4-202ENST00000379018 TYW3Q6IPR3 259 aaKnown RBP15.49■□□□□ 0.07
PDLIM4-202ENST00000379018 ZCCHC23Q6ZST2 131 aa15.49■□□□□ 0.07
PDLIM4-202ENST00000379018 AAED1Q7RTV5 226 aa15.49■□□□□ 0.07
PDLIM4-202ENST00000379018 ARFGAP2Q8N6H7 521 aa15.49■□□□□ 0.07
PDLIM4-202ENST00000379018 NATD1Q8N6N6 113 aa15.49■□□□□ 0.07
PDLIM4-202ENST00000379018 OR4A15Q8NGL6 344 aa15.49■□□□□ 0.07
PDLIM4-202ENST00000379018 COQ8BQ96D53 544 aa15.49■□□□□ 0.07
PDLIM4-202ENST00000379018 SLC38A2Q96QD8 506 aa15.49■□□□□ 0.07
PDLIM4-202ENST00000379018 SNX18Q96RF0 628 aa15.49■□□□□ 0.07
PDLIM4-202ENST00000379018 MECRQ9BV79 373 aa15.49■□□□□ 0.07
PDLIM4-202ENST00000379018 OCEL1Q9H607 264 aa15.49■□□□□ 0.07
PDLIM4-202ENST00000379018 TMEFF2Q9UIK5 374 aaPredicted RBP15.49■□□□□ 0.07
PDLIM4-202ENST00000379018 TMED7Q9Y3B3 224 aa15.49■□□□□ 0.07
PDLIM4-202ENST00000379018 AP3D1O14617 1153 aa15.48■□□□□ 0.07
PDLIM4-202ENST00000379018 LGI1O95970 557 aa15.48■□□□□ 0.07
PDLIM4-202ENST00000379018 IMPDH2P12268 514 aa15.48■□□□□ 0.07
PDLIM4-202ENST00000379018 PRPS1L1P21108 318 aa15.48■□□□□ 0.07
PDLIM4-202ENST00000379018 CFPP27918 469 aa15.48■□□□□ 0.07
PDLIM4-202ENST00000379018 ALDH3A1P30838 453 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms