RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 HSPB2Q16082 182 aa16.79■□□□□ 0.28
SSU72-203ENST00000378725 PGM2L1Q6PCE3 622 aa16.79■□□□□ 0.28
SSU72-203ENST00000378725 XKRXQ6PP77 449 aa16.79■□□□□ 0.28
SSU72-203ENST00000378725 LINC00114Q6XXX2 140 aa16.79■□□□□ 0.28
SSU72-203ENST00000378725 MRGPRGQ86SM5 289 aa16.79■□□□□ 0.28
SSU72-203ENST00000378725 TSPYL5Q86VY4 417 aaPredicted RBP16.79■□□□□ 0.28
SSU72-203ENST00000378725 ZNF808Q8N4W9 903 aaPredicted RBP16.79■□□□□ 0.28
SSU72-203ENST00000378725 FNDC9Q8TBE3 224 aa16.79■□□□□ 0.28
SSU72-203ENST00000378725 STK35Q8TDR2 534 aa16.79■□□□□ 0.28
SSU72-203ENST00000378725 ADAMTS16Q8TE57 1224 aa16.79■□□□□ 0.28
SSU72-203ENST00000378725 ZFP3Q96NJ6 502 aa16.79■□□□□ 0.28
SSU72-203ENST00000378725 THTPAQ9BU02 230 aa16.79■□□□□ 0.28
SSU72-203ENST00000378725 MUC13Q9H3R2 512 aa16.79■□□□□ 0.28
SSU72-203ENST00000378725 RNF122Q9H9V4 155 aa16.79■□□□□ 0.28
SSU72-203ENST00000378725 ACTR3BQ9P1U1 418 aa16.79■□□□□ 0.28
SSU72-203ENST00000378725 MCTS1Q9ULC4 181 aaKnown RBP16.79■□□□□ 0.28
SSU72-203ENST00000378725 SAMD4AQ9UPU9 718 aaKnown RBP16.79■□□□□ 0.28
SSU72-203ENST00000378725 RNF6Q9Y252 685 aa16.79■□□□□ 0.28
SSU72-203ENST00000378725 RP1L1Q8IWN7 2480 aaPredicted RBP16.79■□□□□ 0.28
SSU72-203ENST00000378725 TRAPPC13A5PLN9 417 aa16.78■□□□□ 0.28
SSU72-203ENST00000378725 ELOA3DA6NLF2 546 aaPredicted RBP16.78■□□□□ 0.28
SSU72-203ENST00000378725 CPSF4LA6NMK7 179 aaKnown RBP16.78■□□□□ 0.28
SSU72-203ENST00000378725 PDE5AO76074 875 aa16.78■□□□□ 0.28
SSU72-203ENST00000378725 AQP8O94778 261 aa16.78■□□□□ 0.28
SSU72-203ENST00000378725 LYPD3O95274 346 aa16.78■□□□□ 0.28
SSU72-203ENST00000378725 SYNGR4O95473 234 aa16.78■□□□□ 0.28
SSU72-203ENST00000378725 THY1P04216 161 aa16.78■□□□□ 0.28
SSU72-203ENST00000378725 IMPDH2P12268 514 aa16.78■□□□□ 0.28
SSU72-203ENST00000378725 RASSF2P50749 326 aa16.78■□□□□ 0.28
SSU72-203ENST00000378725 CSNK2A1P68400 391 aaPredicted RBP16.78■□□□□ 0.28
SSU72-203ENST00000378725 MS4A2Q01362 244 aa16.78■□□□□ 0.28
SSU72-203ENST00000378725 EGR4Q05215 589 aa16.78■□□□□ 0.28
SSU72-203ENST00000378725 ELOA3BQ3SY89 546 aa16.78■□□□□ 0.28
SSU72-203ENST00000378725 IFI44LQ53G44 452 aa16.78■□□□□ 0.28
SSU72-203ENST00000378725 NAXEQ8NCW5 288 aa16.78■□□□□ 0.28
SSU72-203ENST00000378725 ELOA3Q8NG57 546 aa16.78■□□□□ 0.28
SSU72-203ENST00000378725 ASB5Q8WWX0 329 aa16.78■□□□□ 0.28
SSU72-203ENST00000378725 GEMIN6Q8WXD5 167 aaKnown RBP16.78■□□□□ 0.28
SSU72-203ENST00000378725 HSH2DQ96JZ2 352 aa16.78■□□□□ 0.28
SSU72-203ENST00000378725 CLPTM1LQ96KA5 538 aa16.78■□□□□ 0.28
SSU72-203ENST00000378725 NSMCE2Q96MF7 247 aa16.78■□□□□ 0.28
SSU72-203ENST00000378725 AMBRA1Q9C0C7 1298 aa16.78■□□□□ 0.28
SSU72-203ENST00000378725 COQ3Q9NZJ6 369 aa16.78■□□□□ 0.28
SSU72-203ENST00000378725 SELENONQ9NZV5 590 aa16.78■□□□□ 0.28
SSU72-203ENST00000378725 SULT2B1O00204 365 aa16.77■□□□□ 0.28
SSU72-203ENST00000378725 GSC2O15499 205 aa16.77■□□□□ 0.28
SSU72-203ENST00000378725 DNPH1O43598 174 aa16.77■□□□□ 0.28
SSU72-203ENST00000378725 CHP2O43745 196 aa16.77■□□□□ 0.28
SSU72-203ENST00000378725 DNAJC8O75937 253 aaPredicted RBP16.77■□□□□ 0.28
SSU72-203ENST00000378725 FCGR2AP12318 317 aa16.77■□□□□ 0.28
SSU72-203ENST00000378725 CHRNB4P30926 498 aa16.77■□□□□ 0.28
SSU72-203ENST00000378725 AGFG1P52594 562 aaKnown RBP16.77■□□□□ 0.28
SSU72-203ENST00000378725 ZNF239Q16600 458 aaKnown RBP16.77■□□□□ 0.28
SSU72-203ENST00000378725 OR2A2Q6IF42 318 aa16.77■□□□□ 0.28
SSU72-203ENST00000378725 FKBP9P1Q75LS8 142 aa16.77■□□□□ 0.28
SSU72-203ENST00000378725 P4HA3Q7Z4N8 544 aa16.77■□□□□ 0.28
SSU72-203ENST00000378725 CCDC71Q8IV32 467 aaPredicted RBP16.77■□□□□ 0.28
SSU72-203ENST00000378725 LILRB4Q8NHJ6 448 aa16.77■□□□□ 0.28
SSU72-203ENST00000378725 ZNF629Q9UEG4 869 aaPredicted RBP16.77■□□□□ 0.28
SSU72-203ENST00000378725 IGKV1D-42A0A075B6H8 117 aa16.76■□□□□ 0.27
SSU72-203ENST00000378725 PRKD3O94806 890 aa16.76■□□□□ 0.27
SSU72-203ENST00000378725 OR5F1O95221 314 aa16.76■□□□□ 0.27
SSU72-203ENST00000378725 IL18BPO95998 194 aa16.76■□□□□ 0.27
SSU72-203ENST00000378725 IFNW1P05000 195 aa16.76■□□□□ 0.27
SSU72-203ENST00000378725 CRHP06850 196 aa16.76■□□□□ 0.27
SSU72-203ENST00000378725 CTSSP25774 331 aa16.76■□□□□ 0.27
SSU72-203ENST00000378725 H3F3AP84243 136 aa16.76■□□□□ 0.27
SSU72-203ENST00000378725 PIN1Q13526 163 aaPredicted RBP16.76■□□□□ 0.27
SSU72-203ENST00000378725 C1orf140Q5VVS0 124 aa16.76■□□□□ 0.27
SSU72-203ENST00000378725 C5orf46Q6UWT4 87 aa16.76■□□□□ 0.27
SSU72-203ENST00000378725 DEF8Q6ZN54 512 aa16.76■□□□□ 0.27
SSU72-203ENST00000378725 GDF7Q7Z4P5 450 aa16.76■□□□□ 0.27
SSU72-203ENST00000378725 TSEN54Q7Z6J9 526 aaKnown RBP16.76■□□□□ 0.27
SSU72-203ENST00000378725 LSRQ86X29 649 aaPredicted RBP16.76■□□□□ 0.27
SSU72-203ENST00000378725 ROBO4Q8WZ75 1007 aa16.76■□□□□ 0.27
SSU72-203ENST00000378725 SDCCAG3Q96C92 435 aa16.76■□□□□ 0.27
SSU72-203ENST00000378725 ASB9Q96DX5 294 aa16.76■□□□□ 0.27
SSU72-203ENST00000378725 SLC41A3Q96GZ6 507 aa16.76■□□□□ 0.27
SSU72-203ENST00000378725 PYURFQ96I23 114 aa16.76■□□□□ 0.27
SSU72-203ENST00000378725 MPP4Q96JB8 637 aa16.76■□□□□ 0.27
SSU72-203ENST00000378725 TMEM43Q9BTV4 400 aa16.76■□□□□ 0.27
SSU72-203ENST00000378725 PRRG4Q9BZD6 226 aa16.76■□□□□ 0.27
SSU72-203ENST00000378725 RIMS3Q9UJD0 308 aa16.76■□□□□ 0.27
SSU72-203ENST00000378725 A4GNTQ9UNA3 340 aa16.76■□□□□ 0.27
SSU72-203ENST00000378725 HELZ2Q9BYK8 2649 aaKnown RBP16.75■□□□□ 0.27
SSU72-203ENST00000378725 HIVEP3Q5T1R4 2406 aa16.75■□□□□ 0.27
SSU72-203ENST00000378725 LIPT2A6NK58 231 aa16.75■□□□□ 0.27
SSU72-203ENST00000378725 ACOT8O14734 319 aa16.75■□□□□ 0.27
SSU72-203ENST00000378725 FZD7O75084 574 aa16.75■□□□□ 0.27
SSU72-203ENST00000378725 TMIGD3P0DMS9 266 aaPredicted RBP16.75■□□□□ 0.27
SSU72-203ENST00000378725 THRBP10828 461 aa16.75■□□□□ 0.27
SSU72-203ENST00000378725 ENPP1P22413 925 aa16.75■□□□□ 0.27
SSU72-203ENST00000378725 IDUAP35475 653 aa16.75■□□□□ 0.27
SSU72-203ENST00000378725 SLC35A1P78382 337 aa16.75■□□□□ 0.27
SSU72-203ENST00000378725 TRAP1Q12931 704 aaKnown RBP16.75■□□□□ 0.27
SSU72-203ENST00000378725 FOXF2Q12947 444 aa16.75■□□□□ 0.27
SSU72-203ENST00000378725 GUSBP1Q15486 140 aa16.75■□□□□ 0.27
SSU72-203ENST00000378725 CDSNQ15517 529 aa16.75■□□□□ 0.27
SSU72-203ENST00000378725 MTX3Q5HYI7 312 aa16.75■□□□□ 0.27
SSU72-203ENST00000378725 EEF1A1P5Q5VTE0 462 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms