RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 CMIPQ8IY22 773 aa13.02□□□□□ -0.33
CLCNKA-202ENST00000375692 TOR1AIP2Q8NFQ8 470 aa13.02□□□□□ -0.33
CLCNKA-202ENST00000375692 OR4C6Q8NH72 309 aa13.02□□□□□ -0.33
CLCNKA-202ENST00000375692 WFIKKN2Q8TEU8 576 aa13.02□□□□□ -0.33
CLCNKA-202ENST00000375692 SUSD6Q92537 303 aa13.02□□□□□ -0.33
CLCNKA-202ENST00000375692 C10orf90Q96M02 699 aa13.02□□□□□ -0.33
CLCNKA-202ENST00000375692 MS4A4EQ96PG1 132 aa13.02□□□□□ -0.33
CLCNKA-202ENST00000375692 TNFRSF13CQ96RJ3 184 aa13.02□□□□□ -0.33
CLCNKA-202ENST00000375692 PDCD1LG2Q9BQ51 273 aa13.02□□□□□ -0.33
CLCNKA-202ENST00000375692 WDR26Q9H7D7 661 aa13.02□□□□□ -0.33
CLCNKA-202ENST00000375692 TMEM74BQ9NUR3 256 aa13.02□□□□□ -0.33
CLCNKA-202ENST00000375692 SPATA2Q9UM82 520 aa13.02□□□□□ -0.33
CLCNKA-202ENST00000375692 SLC35A3Q9Y2D2 325 aa13.02□□□□□ -0.33
CLCNKA-202ENST00000375692 MAB21L2Q9Y586 359 aa13.02□□□□□ -0.33
CLCNKA-202ENST00000375692 C2CD4DB7Z1M9 353 aa13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 TSPAN4O14817 238 aa13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 TFP02787 698 aa13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 ATF4P18848 351 aaPredicted RBP13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 NAA10P41227 235 aaPredicted RBP13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 RAD52P43351 418 aa13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 VASPP50552 380 aaPredicted RBP13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 CCR9P51686 369 aa13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 COL19A1Q14993 1142 aa13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 ARHGAP11BQ3KRB8 267 aa13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 MTSS1LQ765P7 747 aa13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 OR2L8Q8NGY9 312 aa13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 OR52I2Q8NH67 350 aa13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 SMIM4Q8WVI0 70 aa13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 RBPMSQ93062 196 aaKnown RBP13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 PELI1Q96FA3 418 aa13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 HRASLSQ9HDD0 168 aa13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 ABRACLQ9P1F3 81 aa13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 KLK11Q9UBX7 282 aa13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 CD207Q9UJ71 328 aa13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 ACSL5Q9ULC5 683 aa13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 TRAV1-2A0A0B4J238 106 aa13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 RNGTTO60942 597 aaKnown RBP13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 PAK4O96013 591 aaPredicted RBP13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 ZNF888P0CJ79 500 aaPredicted RBP13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 POU3F2P20265 443 aaPredicted RBP13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 NT5EP21589 574 aa13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 PSMB10P40306 273 aa13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 RAG2P55895 527 aa13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 CLDN12P56749 244 aa13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 RPS11P62280 158 aaKnown RBP eCLIP13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 DUSP8Q13202 625 aa13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 GARNL3Q5VVW2 1013 aa13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 FIGNL1Q6PIW4 674 aa13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 LRRC25Q8N386 305 aaPredicted RBP13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 TEX19Q8NA77 164 aa13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 ADAP2Q9NPF8 381 aa13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 CA10Q9NS85 328 aa13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 HCN3Q9P1Z3 774 aa13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 NPTNQ9Y639 398 aa13.01□□□□□ -0.33
CLCNKA-202ENST00000375692 TBC1D3KA0A087X1G2 549 aa13□□□□□ -0.33
CLCNKA-202ENST00000375692 TBC1D3FA6NER0 549 aaPredicted RBP13□□□□□ -0.33
CLCNKA-202ENST00000375692 ARPC1BO15143 372 aaKnown RBP13□□□□□ -0.33
CLCNKA-202ENST00000375692 PRICKLE3O43900 615 aaPredicted RBP13□□□□□ -0.33
CLCNKA-202ENST00000375692 RGS19P49795 217 aa13□□□□□ -0.33
CLCNKA-202ENST00000375692 MAP2K6P52564 334 aa13□□□□□ -0.33
CLCNKA-202ENST00000375692 OPCMLQ14982 345 aa13□□□□□ -0.33
CLCNKA-202ENST00000375692 STPG1Q5TH74 334 aa13□□□□□ -0.33
CLCNKA-202ENST00000375692 TBC1D3GQ6DHY5 549 aa13□□□□□ -0.33
CLCNKA-202ENST00000375692 SLC25A25Q6KCM7 469 aa13□□□□□ -0.33
CLCNKA-202ENST00000375692 CDK20Q8IZL9 346 aa13□□□□□ -0.33
CLCNKA-202ENST00000375692 SRFBP1Q8NEF9 429 aaKnown RBP13□□□□□ -0.33
CLCNKA-202ENST00000375692 SFXN2Q96NB2 322 aa13□□□□□ -0.33
CLCNKA-202ENST00000375692 ERMAPQ96PL5 475 aaPredicted RBP13□□□□□ -0.33
CLCNKA-202ENST00000375692 ACTR6Q9GZN1 396 aa13□□□□□ -0.33
CLCNKA-202ENST00000375692 SLC25A18Q9H1K4 315 aa13□□□□□ -0.33
CLCNKA-202ENST00000375692 PCDHGA9Q9Y5G4 932 aaKnown RBP13□□□□□ -0.33
CLCNKA-202ENST00000375692 KHNYNO15037 678 aaKnown RBP13□□□□□ -0.33
CLCNKA-202ENST00000375692 MID1O15344 667 aa13□□□□□ -0.33
CLCNKA-202ENST00000375692 GSTZ1O43708 216 aaPredicted RBP13□□□□□ -0.33
CLCNKA-202ENST00000375692 GATBO75879 557 aaKnown RBP13□□□□□ -0.33
CLCNKA-202ENST00000375692 CXCL2P19875 107 aa13□□□□□ -0.33
CLCNKA-202ENST00000375692 PSMB1P20618 241 aaKnown RBP13□□□□□ -0.33
CLCNKA-202ENST00000375692 DYRK1AQ13627 763 aa13□□□□□ -0.33
CLCNKA-202ENST00000375692 SEZ6L2Q6UXD5 910 aa13□□□□□ -0.33
CLCNKA-202ENST00000375692 GPAT4Q86UL3 456 aa13□□□□□ -0.33
CLCNKA-202ENST00000375692 GRAMD2AQ8IUY3 354 aa13□□□□□ -0.33
CLCNKA-202ENST00000375692 TMEFF1Q8IYR6 380 aa13□□□□□ -0.33
CLCNKA-202ENST00000375692 HDDC3Q8N4P3 179 aa13□□□□□ -0.33
CLCNKA-202ENST00000375692 SDR9C7Q8NEX9 313 aa13□□□□□ -0.33
CLCNKA-202ENST00000375692 ZCCHC10Q8TBK6 192 aa13□□□□□ -0.33
CLCNKA-202ENST00000375692 ARPC5LQ9BPX5 153 aa13□□□□□ -0.33
CLCNKA-202ENST00000375692 C12orf10Q9HB07 376 aa13□□□□□ -0.33
CLCNKA-202ENST00000375692 ANKRD10Q9NXR5 420 aa13□□□□□ -0.33
CLCNKA-202ENST00000375692 MGAT4CQ9UBM8 478 aa13□□□□□ -0.33
CLCNKA-202ENST00000375692 POMT2Q9UKY4 750 aa13□□□□□ -0.33
CLCNKA-202ENST00000375692 TEX46H3BTG2 121 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 TRIM77I1YAP6 450 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 PSMD9O00233 223 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 PTP4A3O75365 173 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 ACSM4P0C7M7 580 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 ZNF3P17036 446 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 NAT1P18440 290 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 HSD17B12Q53GQ0 312 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 C2orf27AQ580R0 203 aa12.99□□□□□ -0.33
CLCNKA-202ENST00000375692 KIAA1324Q6UXG2 1013 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms