RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 KATNB1Q9BVA0 655 aa14.26□□□□□ -0.13
CCDC40-202ENST00000374876 TMED9Q9BVK6 235 aa14.26□□□□□ -0.13
CCDC40-202ENST00000374876 CNTNAP3Q9BZ76 1288 aa14.26□□□□□ -0.13
CCDC40-202ENST00000374876 SPRY4Q9C004 299 aa14.26□□□□□ -0.13
CCDC40-202ENST00000374876 FN3KQ9H479 309 aa14.26□□□□□ -0.13
CCDC40-202ENST00000374876 DKK4Q9UBT3 224 aa14.26□□□□□ -0.13
CCDC40-202ENST00000374876 TPRP12270 2363 aaKnown RBP14.26□□□□□ -0.13
CCDC40-202ENST00000374876 APC2O95996 2303 aa14.26□□□□□ -0.13
CCDC40-202ENST00000374876 AHCTF1Q8WYP5 2266 aa14.26□□□□□ -0.13
CCDC40-202ENST00000374876 DMXL2Q8TDJ6 3036 aa14.26□□□□□ -0.13
CCDC40-202ENST00000374876 A0A0A6YYC8 382 aaPredicted RBP14.25□□□□□ -0.13
CCDC40-202ENST00000374876 A0A1W2PQL4 384 aaPredicted RBP14.25□□□□□ -0.13
CCDC40-202ENST00000374876 H3BMH7 237 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 I3L1I5 382 aaPredicted RBP14.25□□□□□ -0.13
CCDC40-202ENST00000374876 BHLHE40O14503 412 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 ATXN8OSP0DMR3 200 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 CELP19835 753 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 DRD5P21918 477 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 FXYD6P3P58550 94 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 ACSM1Q08AH1 577 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 STX4Q12846 297 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 PDZK1Q5T2W1 519 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 DDI2Q5TDH0 399 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 FAM131AQ6UXB0 335 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 TMPRSS11FQ6ZWK6 438 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 MEPCEQ7L2J0 689 aaKnown RBP14.25□□□□□ -0.13
CCDC40-202ENST00000374876 BPHLQ86WA6 291 aaPredicted RBP14.25□□□□□ -0.13
CCDC40-202ENST00000374876 LNX2Q8N448 690 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 SIRT6Q8N6T7 355 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 SETD6Q8TBK2 473 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 SPRYD4Q8WW59 207 aaPredicted RBP14.25□□□□□ -0.13
CCDC40-202ENST00000374876 ZCCHC14Q8WYQ9 949 aaKnown RBP14.25□□□□□ -0.13
CCDC40-202ENST00000374876 CNOT9Q92600 299 aaKnown RBP14.25□□□□□ -0.13
CCDC40-202ENST00000374876 RBM18Q96H35 190 aaKnown RBP14.25□□□□□ -0.13
CCDC40-202ENST00000374876 TXNDC15Q96J42 360 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 COQ7Q99807 217 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 IFT27Q9BW83 186 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 JAM3Q9BX67 310 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 EVA1AQ9H8M9 152 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 AKIRIN1Q9H9L7 192 aaPredicted RBP14.25□□□□□ -0.13
CCDC40-202ENST00000374876 HCN3Q9P1Z3 774 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 PAIP2BQ9ULR5 123 aaKnown RBP14.25□□□□□ -0.13
CCDC40-202ENST00000374876 RAXQ9Y2V3 346 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 URB1O60287 2271 aaKnown RBP14.25□□□□□ -0.13
CCDC40-202ENST00000374876 SMIM30A4D0T7 59 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 SYNDIG1LA6NDD5 238 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 CASKO14936 926 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 ZNF749O43361 778 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 HLA-DPB1P04440 258 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 TBXA2RP21731 343 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 AZGP1P25311 298 aaKnown RBP14.25□□□□□ -0.13
CCDC40-202ENST00000374876 SKP1P63208 163 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 ZMAT1Q5H9K5 638 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 GARNL3Q5VVW2 1013 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 NIPAL3Q6P499 406 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 ZNF322Q6U7Q0 402 aaPredicted RBP14.25□□□□□ -0.13
CCDC40-202ENST00000374876 GPR135Q8IZ08 494 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 OR13C2Q8NGS9 318 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 RIT1Q92963 219 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 DCBLD2Q96PD2 775 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 ZNF649Q9BS31 505 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 B3GNT4Q9C0J1 378 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 ENKD1Q9H0I2 346 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 MED20Q9H944 212 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 FOLH1BQ9HBA9 442 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 ACACAQ13085 2346 aa14.25□□□□□ -0.13
CCDC40-202ENST00000374876 STMND1H3BQB6 276 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 RNH1P13489 461 aaKnown RBP14.24□□□□□ -0.13
CCDC40-202ENST00000374876 TPTEP56180 551 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 CTBP2P56545 445 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 PSG6Q00889 435 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 ZNF79Q15937 498 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 CARTPTQ16568 116 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 B3GLCTQ6Y288 498 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 AKAP14Q86UN6 197 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 KLBQ86Z14 1044 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 ACBD7Q8N6N7 88 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 HOXB13Q92826 284 aaPredicted RBP14.24□□□□□ -0.13
CCDC40-202ENST00000374876 CLIP3Q96DZ5 547 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 ARSGQ96EG1 525 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 DIRAS2Q96HU8 199 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 LMF2Q9BU23 707 aaKnown RBP14.24□□□□□ -0.13
CCDC40-202ENST00000374876 HDHD5Q9BXW7 423 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 SRRQ9GZT4 340 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 TBC1D24Q9ULP9 559 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 MRPS33Q9Y291 106 aaKnown RBP14.24□□□□□ -0.13
CCDC40-202ENST00000374876 A0A0B4J2E0 115 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 A0A1B0GX12 115 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 FABP12A6NFH5 140 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 C12orf71A8MTZ7 269 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 J3QRE1 110 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 ACACBO00763 2458 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 CHP2O43745 196 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 SRPX2O60687 465 aaPredicted RBP14.24□□□□□ -0.13
CCDC40-202ENST00000374876 HCN1O60741 890 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 S1PR1P21453 382 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 PLAURQ03405 335 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 KLHL12Q53G59 568 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 ARMC4Q5T2S8 1044 aa14.24□□□□□ -0.13
CCDC40-202ENST00000374876 EGFL6Q8IUX8 553 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms