RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 AFF3P51826 1226 aaKnown RBP11.47□□□□□ -0.57
NPLOC4-202ENST00000374747 CAMK2DQ13557 499 aa11.47□□□□□ -0.57
NPLOC4-202ENST00000374747 ZNF77Q15935 545 aa11.47□□□□□ -0.57
NPLOC4-202ENST00000374747 UBE2NLQ5JXB2 153 aa11.47□□□□□ -0.57
NPLOC4-202ENST00000374747 PODNL1Q6PEZ8 512 aa11.47□□□□□ -0.57
NPLOC4-202ENST00000374747 APOOLQ6UXV4 268 aa11.47□□□□□ -0.57
NPLOC4-202ENST00000374747 Q6ZSR6 202 aa11.47□□□□□ -0.57
NPLOC4-202ENST00000374747 DPY19L4Q7Z388 723 aa11.47□□□□□ -0.57
NPLOC4-202ENST00000374747 OR4D6Q8NGJ1 314 aa11.47□□□□□ -0.57
NPLOC4-202ENST00000374747 HAS2Q92819 552 aa11.47□□□□□ -0.57
NPLOC4-202ENST00000374747 SLAMF9Q96A28 289 aa11.47□□□□□ -0.57
NPLOC4-202ENST00000374747 C7orf72A4D263 438 aa11.47□□□□□ -0.57
NPLOC4-202ENST00000374747 HOXC11O43248 304 aaPredicted RBP11.47□□□□□ -0.57
NPLOC4-202ENST00000374747 PEX14O75381 377 aa11.47□□□□□ -0.57
NPLOC4-202ENST00000374747 ACTL6BO94805 426 aa11.47□□□□□ -0.57
NPLOC4-202ENST00000374747 LIPCP11150 499 aa11.47□□□□□ -0.57
NPLOC4-202ENST00000374747 UBL4AP11441 157 aa11.47□□□□□ -0.57
NPLOC4-202ENST00000374747 NSDHLQ15738 373 aa11.47□□□□□ -0.57
NPLOC4-202ENST00000374747 SSX2Q16385 188 aa11.47□□□□□ -0.57
NPLOC4-202ENST00000374747 DUSP6Q16828 381 aa11.47□□□□□ -0.57
NPLOC4-202ENST00000374747 CLVS2Q5SYC1 327 aa11.47□□□□□ -0.57
NPLOC4-202ENST00000374747 DCST2Q5T1A1 773 aa11.47□□□□□ -0.57
NPLOC4-202ENST00000374747 FAM83HQ6ZRV2 1179 aaPredicted RBP11.47□□□□□ -0.57
NPLOC4-202ENST00000374747 KCTD12Q96CX2 325 aaKnown RBP11.47□□□□□ -0.57
NPLOC4-202ENST00000374747 SMIM3Q9BZL3 60 aa11.47□□□□□ -0.57
NPLOC4-202ENST00000374747 SLC25A31Q9H0C2 315 aa11.47□□□□□ -0.57
NPLOC4-202ENST00000374747 ZNF160Q9HCG1 818 aa11.47□□□□□ -0.57
NPLOC4-202ENST00000374747 C17orf113A0A1B0GUU1 675 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 CD300LBA8K4G0 201 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 HLA-DMAP28067 261 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 P2RY2P41231 377 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 ERVK-16P61578 105 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 SMN1Q16637 294 aaKnown RBP11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 TCTE1Q5JU00 501 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 PLXDC1Q8IUK5 500 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 LRRC56Q8IYG6 542 aaPredicted RBP11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 OR5D14Q8NGL3 314 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 KIAA1143Q96AT1 154 aaPredicted RBP11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 TBC1D20Q96BZ9 403 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 RPS10-NUDT3A0A1W2PQS6 291 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 CDHR4A6H8M9 788 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 POM121CA8CG34 1229 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 SEC14L5O43304 696 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 HOXC8P31273 242 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 RPS10P46783 165 aaKnown RBP11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 VEGFCP49767 419 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 ADARB1P78563 741 aaKnown RBP11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 SORDQ00796 357 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 SERTAD2Q14140 314 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 PRAMEF8Q5VWM4 474 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 PRAMEF7Q5VXH5 474 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 SPRED1Q7Z699 444 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 CLEC14AQ86T13 490 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 GLB1L2Q8IW92 636 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 C22orf15Q8WYQ4 148 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 PRSS16Q9NQE7 514 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 THAP10Q9P2Z0 257 aaPredicted RBP11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 HHLA2Q9UM44 414 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 FBXO7Q9Y3I1 522 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 DOCK3Q8IZD9 2030 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 LCATP04180 440 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 RPP30P78346 268 aaKnown RBP11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 LTBQ06643 244 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 SELPLGQ14242 412 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 RTL6Q6ICC9 239 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 ZNF322Q6U7Q0 402 aaPredicted RBP11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 OR4M1Q8NGD0 313 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 OR51Q1Q8NH59 317 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 RPL3LQ92901 407 aaKnown RBP11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 NEIL2Q969S2 332 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 SLC38A1Q9H2H9 487 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 GFOD1Q9NXC2 390 aa11.46□□□□□ -0.57
NPLOC4-202ENST00000374747 GPR39O43194 453 aa11.46□□□□□ -0.58
NPLOC4-202ENST00000374747 MED6O75586 246 aa11.46□□□□□ -0.58
NPLOC4-202ENST00000374747 GABRA5P31644 462 aa11.46□□□□□ -0.58
NPLOC4-202ENST00000374747 AHRP35869 848 aa11.46□□□□□ -0.58
NPLOC4-202ENST00000374747 FAM122CQ6P4D5 195 aa11.46□□□□□ -0.58
NPLOC4-202ENST00000374747 PGM2L1Q6PCE3 622 aa11.46□□□□□ -0.58
NPLOC4-202ENST00000374747 CD163Q86VB7 1156 aa11.46□□□□□ -0.58
NPLOC4-202ENST00000374747 MEX3DQ86XN8 651 aaKnown RBP11.46□□□□□ -0.58
NPLOC4-202ENST00000374747 HDAC8Q9BY41 377 aa11.46□□□□□ -0.58
NPLOC4-202ENST00000374747 SAMD10Q9BYL1 202 aa11.46□□□□□ -0.58
NPLOC4-202ENST00000374747 CNTNAP3Q9BZ76 1288 aa11.46□□□□□ -0.58
NPLOC4-202ENST00000374747 GPATCH2Q9NW75 528 aa11.46□□□□□ -0.58
NPLOC4-202ENST00000374747 GJE1A6NN92 205 aa11.46□□□□□ -0.58
NPLOC4-202ENST00000374747 SHOXO15266 292 aa11.46□□□□□ -0.58
NPLOC4-202ENST00000374747 OR2T1O43869 369 aa11.46□□□□□ -0.58
NPLOC4-202ENST00000374747 RAB4AP20338 218 aa11.46□□□□□ -0.58
NPLOC4-202ENST00000374747 DEFA6Q01524 100 aa11.46□□□□□ -0.58
NPLOC4-202ENST00000374747 SCGB2A2Q13296 93 aa11.46□□□□□ -0.58
NPLOC4-202ENST00000374747 C6orf132Q5T0Z8 1188 aa11.46□□□□□ -0.58
NPLOC4-202ENST00000374747 OR13F1Q8NGS4 319 aa11.46□□□□□ -0.58
NPLOC4-202ENST00000374747 ZFAND1Q8TCF1 268 aa11.46□□□□□ -0.58
NPLOC4-202ENST00000374747 ARRDC3Q96B67 414 aa11.46□□□□□ -0.58
NPLOC4-202ENST00000374747 TOE1Q96GM8 510 aaKnown RBP11.46□□□□□ -0.58
NPLOC4-202ENST00000374747 MYADMQ96S97 322 aa11.46□□□□□ -0.58
NPLOC4-202ENST00000374747 KIR2DS5A0A0G2JLQ3 304 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 A0A0G2JNG1 304 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 MDFIC2A0A1B0GVS7 189 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 KIR2DS3K7RE56 304 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms