RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.26□□□□□ -0.29
SMPDL3B-201ENST00000373888 HS3ST5Q8IZT8 346 aa13.26□□□□□ -0.29
SMPDL3B-201ENST00000373888 ATG16L2Q8NAA4 619 aa13.26□□□□□ -0.29
SMPDL3B-201ENST00000373888 FAM98AQ8NCA5 519 aaKnown RBP13.26□□□□□ -0.29
SMPDL3B-201ENST00000373888 GIPC3Q8TF64 312 aa13.26□□□□□ -0.29
SMPDL3B-201ENST00000373888 ACOT11Q8WXI4 607 aaPredicted RBP13.26□□□□□ -0.29
SMPDL3B-201ENST00000373888 MUS81Q96NY9 551 aa13.26□□□□□ -0.29
SMPDL3B-201ENST00000373888 PSD2Q9BQI7 771 aa13.26□□□□□ -0.29
SMPDL3B-201ENST00000373888 DKKL1Q9UK85 242 aa13.26□□□□□ -0.29
SMPDL3B-201ENST00000373888 TMCC3Q9ULS5 477 aa13.26□□□□□ -0.29
SMPDL3B-201ENST00000373888 A0A087WUU8 490 aa13.25□□□□□ -0.29
SMPDL3B-201ENST00000373888 SH3PXD2BA1X283 911 aa13.25□□□□□ -0.29
SMPDL3B-201ENST00000373888 ARRDC5A6NEK1 342 aa13.25□□□□□ -0.29
SMPDL3B-201ENST00000373888 ZIC3O60481 467 aa13.25□□□□□ -0.29
SMPDL3B-201ENST00000373888 WISP1O95388 367 aa13.25□□□□□ -0.29
SMPDL3B-201ENST00000373888 FAM87AP0C7U9 286 aa13.25□□□□□ -0.29
SMPDL3B-201ENST00000373888 ZNF17P17021 662 aa13.25□□□□□ -0.29
SMPDL3B-201ENST00000373888 HK1P19367 917 aa13.25□□□□□ -0.29
SMPDL3B-201ENST00000373888 APOBEC1P41238 236 aaKnown RBP13.25□□□□□ -0.29
SMPDL3B-201ENST00000373888 RBM34P42696 430 aaKnown RBP13.25□□□□□ -0.29
SMPDL3B-201ENST00000373888 SEC23BQ15437 767 aa13.25□□□□□ -0.29
SMPDL3B-201ENST00000373888 MICAQ29983 383 aa13.25□□□□□ -0.29
SMPDL3B-201ENST00000373888 TMEM44Q2T9K0 475 aa13.25□□□□□ -0.29
SMPDL3B-201ENST00000373888 ZNF691Q5VV52 312 aa13.25□□□□□ -0.29
SMPDL3B-201ENST00000373888 ASB18Q6ZVZ8 466 aa13.25□□□□□ -0.29
SMPDL3B-201ENST00000373888 GTPBP8Q8N3Z3 284 aaPredicted RBP13.25□□□□□ -0.29
SMPDL3B-201ENST00000373888 C9orf43Q8TAL5 461 aaPredicted RBP13.25□□□□□ -0.29
SMPDL3B-201ENST00000373888 POC1BQ8TC44 478 aa13.25□□□□□ -0.29
SMPDL3B-201ENST00000373888 TMEM255BQ8WV15 326 aa13.25□□□□□ -0.29
SMPDL3B-201ENST00000373888 SLC39A7Q92504 469 aa13.25□□□□□ -0.29
SMPDL3B-201ENST00000373888 HDAC2Q92769 488 aaKnown RBP13.25□□□□□ -0.29
SMPDL3B-201ENST00000373888 HS6ST2Q96MM7 605 aa13.25□□□□□ -0.29
SMPDL3B-201ENST00000373888 NPAS1Q99742 590 aa13.25□□□□□ -0.29
SMPDL3B-201ENST00000373888 APOL4Q9BPW4 351 aa13.25□□□□□ -0.29
SMPDL3B-201ENST00000373888 ARHGAP9Q9BRR9 750 aa13.25□□□□□ -0.29
SMPDL3B-201ENST00000373888 OR2B2Q9GZK3 357 aa13.25□□□□□ -0.29
SMPDL3B-201ENST00000373888 KRT84Q9NSB2 600 aa13.25□□□□□ -0.29
SMPDL3B-201ENST00000373888 QPCTLQ9NXS2 382 aa13.25□□□□□ -0.29
SMPDL3B-201ENST00000373888 B3GNT3Q9Y2A9 372 aa13.25□□□□□ -0.29
SMPDL3B-201ENST00000373888 PCNX3Q9H6A9 2034 aa13.25□□□□□ -0.29
SMPDL3B-201ENST00000373888 ACACBO00763 2458 aa13.25□□□□□ -0.29
SMPDL3B-201ENST00000373888 ELOA3DA6NLF2 546 aaPredicted RBP13.24□□□□□ -0.29
SMPDL3B-201ENST00000373888 ZZEF1O43149 2961 aa13.24□□□□□ -0.29
SMPDL3B-201ENST00000373888 CCNB2O95067 398 aa13.24□□□□□ -0.29
SMPDL3B-201ENST00000373888 HPNP05981 417 aa13.24□□□□□ -0.29
SMPDL3B-201ENST00000373888 ATP6V1B1P15313 513 aa13.24□□□□□ -0.29
SMPDL3B-201ENST00000373888 PRKACGP22612 351 aa13.24□□□□□ -0.29
SMPDL3B-201ENST00000373888 CXCR1P25024 350 aa13.24□□□□□ -0.29
SMPDL3B-201ENST00000373888 GDF1P27539 372 aa13.24□□□□□ -0.29
SMPDL3B-201ENST00000373888 RFC3P40938 356 aa13.24□□□□□ -0.29
SMPDL3B-201ENST00000373888 DAPP51397 102 aa13.24□□□□□ -0.29
SMPDL3B-201ENST00000373888 MAP2K6P52564 334 aa13.24□□□□□ -0.29
SMPDL3B-201ENST00000373888 SH3BGRP55822 239 aaPredicted RBP13.24□□□□□ -0.29
SMPDL3B-201ENST00000373888 PLGLB1Q02325 96 aa13.24□□□□□ -0.29
SMPDL3B-201ENST00000373888 ELOA3BQ3SY89 546 aa13.24□□□□□ -0.29
SMPDL3B-201ENST00000373888 ZNF730Q6ZMV8 503 aa13.24□□□□□ -0.29
SMPDL3B-201ENST00000373888 MBOAT2Q6ZWT7 520 aa13.24□□□□□ -0.29
SMPDL3B-201ENST00000373888 SLC22A16Q86VW1 577 aa13.24□□□□□ -0.29
SMPDL3B-201ENST00000373888 ADGRG3Q86Y34 549 aa13.24□□□□□ -0.29
SMPDL3B-201ENST00000373888 RNF113BQ8IZP6 322 aaKnown RBP13.24□□□□□ -0.29
SMPDL3B-201ENST00000373888 LINC00471Q8N535 108 aa13.24□□□□□ -0.29
SMPDL3B-201ENST00000373888 TMEM251Q8N6I4 163 aa13.24□□□□□ -0.29
SMPDL3B-201ENST00000373888 FAM83FQ8NEG4 500 aaPredicted RBP13.24□□□□□ -0.29
SMPDL3B-201ENST00000373888 ELOA3Q8NG57 546 aa13.24□□□□□ -0.29
SMPDL3B-201ENST00000373888 TMEM239Q8WW34 195 aa13.24□□□□□ -0.29
SMPDL3B-201ENST00000373888 BARD1Q99728 777 aaKnown RBP13.24□□□□□ -0.29
SMPDL3B-201ENST00000373888 TMEM43Q9BTV4 400 aa13.24□□□□□ -0.29
SMPDL3B-201ENST00000373888 IGKV1D-42A0A075B6H8 117 aa13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 TMED7-TICAM2A0A0A6YYA0 188 aa13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 ACOT7O00154 380 aa13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 BCKDKO14874 412 aa13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 ELK4P28324 431 aa13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 TTKP33981 857 aa13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 UGT2B15P54855 530 aa13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 GABARAPL2P60520 117 aa13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 ESRRGP62508 458 aa13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 LAPTM4AQ15012 233 aa13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 INAQ16352 499 aa13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 ZNF770Q6IQ21 691 aaPredicted RBP13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 RPUSD3Q6P087 351 aaKnown RBP13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 OR10G2Q8NGC3 310 aa13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 OR4K5Q8NGD3 323 aa13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 PIGQQ9BRB3 760 aa13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 SLC19A3Q9BZV2 496 aa13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 ZNF556Q9HAH1 456 aa13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 VCX3AQ9NNX9 186 aa13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 CHRNA9Q9UGM1 479 aa13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 POFUT2Q9Y2G5 429 aa13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 TMED7Q9Y3B3 224 aa13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 TMEM72A0PK05 275 aa13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 FAM166BA8MTA8 275 aa13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 SHISA8B8ZZ34 492 aa13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 ZNF208O43345 1280 aa13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 SUSD5O60279 629 aa13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 CLIC3O95833 236 aa13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 IGF2P01344 180 aa13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 MAGEA5P43359 124 aa13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 ALDH3B2P48448 385 aa13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 NUP107P57740 925 aa13.23□□□□□ -0.29
SMPDL3B-201ENST00000373888 B3GALT5-AS1P59052 145 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms