RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 HMX3A6NHT5 357 aa21.85■■□□□ 1.09
CDK9-201ENST00000373264 A8MUA0 341 aa21.85■■□□□ 1.09
CDK9-201ENST00000373264 IDSB3KWA1 339 aa21.85■■□□□ 1.09
CDK9-201ENST00000373264 LYRM1O43325 122 aa21.85■■□□□ 1.09
CDK9-201ENST00000373264 HLA-DQB1P01920 261 aa21.85■■□□□ 1.09
CDK9-201ENST00000373264 FAM157BP0CG42 384 aa21.85■■□□□ 1.09
CDK9-201ENST00000373264 AGFG1P52594 562 aaKnown RBP21.85■■□□□ 1.09
CDK9-201ENST00000373264 ZNF141Q15928 474 aa21.85■■□□□ 1.09
CDK9-201ENST00000373264 ZFP69Q49AA0 526 aa21.85■■□□□ 1.09
CDK9-201ENST00000373264 PRAMEF17Q5VTA0 474 aa21.85■■□□□ 1.09
CDK9-201ENST00000373264 SFXN4Q6P4A7 337 aa21.85■■□□□ 1.09
CDK9-201ENST00000373264 MZT2AQ6P582 158 aa21.85■■□□□ 1.09
CDK9-201ENST00000373264 TRPV5Q9NQA5 729 aa21.85■■□□□ 1.09
CDK9-201ENST00000373264 ST6GALNAC1Q9NSC7 600 aaPredicted RBP21.85■■□□□ 1.09
CDK9-201ENST00000373264 RPS6KB2Q9UBS0 482 aa21.85■■□□□ 1.09
CDK9-201ENST00000373264 SELENOFO60613 162 aa21.84■■□□□ 1.09
CDK9-201ENST00000373264 CLPSP04118 112 aa21.84■■□□□ 1.09
CDK9-201ENST00000373264 GAAP10253 952 aa21.84■■□□□ 1.09
CDK9-201ENST00000373264 RPL4P36578 427 aaKnown RBP21.84■■□□□ 1.09
CDK9-201ENST00000373264 DDOSTP39656 456 aa21.84■■□□□ 1.09
CDK9-201ENST00000373264 PSMB10P40306 273 aa21.84■■□□□ 1.09
CDK9-201ENST00000373264 GAS6Q14393 721 aa21.84■■□□□ 1.09
CDK9-201ENST00000373264 QPRTQ15274 297 aa21.84■■□□□ 1.09
CDK9-201ENST00000373264 CD226Q15762 336 aa21.84■■□□□ 1.09
CDK9-201ENST00000373264 BCL2A1Q16548 175 aa21.84■■□□□ 1.09
CDK9-201ENST00000373264 TATDN3Q17R31 274 aa21.84■■□□□ 1.09
CDK9-201ENST00000373264 ACSM3Q53FZ2 586 aa21.84■■□□□ 1.09
CDK9-201ENST00000373264 HBMQ6B0K9 141 aa21.84■■□□□ 1.09
CDK9-201ENST00000373264 ZSCAN1Q8NBB4 408 aa21.84■■□□□ 1.09
CDK9-201ENST00000373264 Q9N2J8 555 aa21.84■■□□□ 1.09
CDK9-201ENST00000373264 ST6GALNAC2Q9UJ37 374 aa21.84■■□□□ 1.09
CDK9-201ENST00000373264 COPS3Q9UNS2 423 aa21.84■■□□□ 1.09
CDK9-201ENST00000373264 SDC3O75056 442 aa21.84■■□□□ 1.09
CDK9-201ENST00000373264 MAGEB1P43366 347 aa21.84■■□□□ 1.09
CDK9-201ENST00000373264 ATP12AP54707 1039 aa21.84■■□□□ 1.09
CDK9-201ENST00000373264 ERVK-25P63136 954 aa21.84■■□□□ 1.09
CDK9-201ENST00000373264 RNASE12Q5GAN4 147 aaKnown RBP21.84■■□□□ 1.09
CDK9-201ENST00000373264 ZNF57Q68EA5 555 aaPredicted RBP21.84■■□□□ 1.09
CDK9-201ENST00000373264 CBLN3Q6UW01 205 aa21.84■■□□□ 1.09
CDK9-201ENST00000373264 OR4D9Q8NGE8 314 aa21.84■■□□□ 1.09
CDK9-201ENST00000373264 OR5H6Q8NGV6 325 aa21.84■■□□□ 1.09
CDK9-201ENST00000373264 LMX1AQ8TE12 382 aa21.84■■□□□ 1.09
CDK9-201ENST00000373264 FBXL21Q9UKT6 434 aa21.84■■□□□ 1.09
CDK9-201ENST00000373264 RPS5P46782 204 aaKnown RBP21.83■■□□□ 1.09
CDK9-201ENST00000373264 DMKNQ6E0U4 476 aaPredicted RBP21.83■■□□□ 1.09
CDK9-201ENST00000373264 ARHGAP11AQ6P4F7 1023 aa21.83■■□□□ 1.09
CDK9-201ENST00000373264 PLET1Q6UQ28 207 aa21.83■■□□□ 1.09
CDK9-201ENST00000373264 MOSPD2Q8NHP6 518 aa21.83■■□□□ 1.09
CDK9-201ENST00000373264 ZDHHC19Q8WVZ1 309 aaPredicted RBP21.83■■□□□ 1.09
CDK9-201ENST00000373264 PELI1Q96FA3 418 aa21.83■■□□□ 1.09
CDK9-201ENST00000373264 RBFOX1Q9NWB1 397 aaKnown RBP21.83■■□□□ 1.09
CDK9-201ENST00000373264 SOHLH2Q9NX45 425 aa21.83■■□□□ 1.09
CDK9-201ENST00000373264 OR6C68A6NDL8 312 aa21.83■■□□□ 1.08
CDK9-201ENST00000373264 SERINC4A6NH21 518 aa21.83■■□□□ 1.08
CDK9-201ENST00000373264 ZNF615Q8N8J6 731 aa21.83■■□□□ 1.08
CDK9-201ENST00000373264 OR51Q1Q8NH59 317 aa21.83■■□□□ 1.08
CDK9-201ENST00000373264 RELTQ969Z4 430 aa21.83■■□□□ 1.08
CDK9-201ENST00000373264 SGTBQ96EQ0 304 aa21.83■■□□□ 1.08
CDK9-201ENST00000373264 PDCD1LG2Q9BQ51 273 aa21.83■■□□□ 1.08
CDK9-201ENST00000373264 PRAMEF2O60811 474 aa21.82■■□□□ 1.08
CDK9-201ENST00000373264 SC5DO75845 299 aa21.82■■□□□ 1.08
CDK9-201ENST00000373264 NDUFB2O95178 105 aa21.82■■□□□ 1.08
CDK9-201ENST00000373264 PROS1P07225 676 aa21.82■■□□□ 1.08
CDK9-201ENST00000373264 F8A1P23610 371 aa21.82■■□□□ 1.08
CDK9-201ENST00000373264 RBM34P42696 430 aaKnown RBP21.82■■□□□ 1.08
CDK9-201ENST00000373264 CAPZBP47756 277 aa21.82■■□□□ 1.08
CDK9-201ENST00000373264 CCR4P51679 360 aa21.82■■□□□ 1.08
CDK9-201ENST00000373264 APOOLQ6UXV4 268 aa21.82■■□□□ 1.08
CDK9-201ENST00000373264 ESPNLQ6ZVH7 1005 aa21.82■■□□□ 1.08
CDK9-201ENST00000373264 C3orf49Q96BT1 292 aa21.82■■□□□ 1.08
CDK9-201ENST00000373264 NECTIN4Q96NY8 510 aa21.82■■□□□ 1.08
CDK9-201ENST00000373264 TSSK2Q96PF2 358 aa21.82■■□□□ 1.08
CDK9-201ENST00000373264 GFM1Q96RP9 751 aaKnown RBP21.82■■□□□ 1.08
CDK9-201ENST00000373264 KCNJ15Q99712 375 aa21.82■■□□□ 1.08
CDK9-201ENST00000373264 HDHD2Q9H0R4 259 aa21.82■■□□□ 1.08
CDK9-201ENST00000373264 ACOXLQ9NUZ1 547 aa21.82■■□□□ 1.08
CDK9-201ENST00000373264 SERTAD3Q9UJW9 196 aa21.82■■□□□ 1.08
CDK9-201ENST00000373264 ALG5Q9Y673 324 aa21.82■■□□□ 1.08
CDK9-201ENST00000373264 IGKV1D-42A0A075B6H8 117 aa21.82■■□□□ 1.08
CDK9-201ENST00000373264 CHURC1-FNTBB4DL54 471 aa21.82■■□□□ 1.08
CDK9-201ENST00000373264 GABRA4P48169 554 aa21.82■■□□□ 1.08
CDK9-201ENST00000373264 FNTBP49356 437 aa21.82■■□□□ 1.08
CDK9-201ENST00000373264 IGLV3-21P80748 117 aaPredicted RBP21.82■■□□□ 1.08
CDK9-201ENST00000373264 DEFB133Q30KQ1 61 aa21.82■■□□□ 1.08
CDK9-201ENST00000373264 CHCHD2P9Q5T1J5 151 aaPredicted RBP21.82■■□□□ 1.08
CDK9-201ENST00000373264 GPR135Q8IZ08 494 aa21.82■■□□□ 1.08
CDK9-201ENST00000373264 PMM1Q92871 262 aa21.82■■□□□ 1.08
CDK9-201ENST00000373264 YIPF2Q9BWQ6 316 aa21.82■■□□□ 1.08
CDK9-201ENST00000373264 PCDHGB7Q9Y5F8 929 aa21.82■■□□□ 1.08
CDK9-201ENST00000373264 FAM240BA0A1B0GVZ2 78 aa21.81■■□□□ 1.08
CDK9-201ENST00000373264 PRR32B1ATL7 298 aa21.81■■□□□ 1.08
CDK9-201ENST00000373264 IGLV3-19P01714 112 aa21.81■■□□□ 1.08
CDK9-201ENST00000373264 GALP22466 123 aa21.81■■□□□ 1.08
CDK9-201ENST00000373264 SRP9P49458 86 aaKnown RBP21.81■■□□□ 1.08
CDK9-201ENST00000373264 MED25Q71SY5 747 aa21.81■■□□□ 1.08
CDK9-201ENST00000373264 PXKQ7Z7A4 578 aa21.81■■□□□ 1.08
CDK9-201ENST00000373264 PRR22Q8IZ63 422 aa21.81■■□□□ 1.08
CDK9-201ENST00000373264 OR6K6Q8NGW6 343 aa21.81■■□□□ 1.08
CDK9-201ENST00000373264 ABHD1Q96SE0 405 aa21.81■■□□□ 1.08
CDK9-201ENST00000373264 MKKSQ9NPJ1 570 aaPredicted RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms