RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 TXNL4BQ9NX01 149 aaKnown RBP10.77□□□□□ -0.68
VCL-202ENST00000372755 MOKQ9UQ07 419 aa10.77□□□□□ -0.68
VCL-202ENST00000372755 PCDHGA1Q9Y5H4 931 aa10.77□□□□□ -0.68
VCL-202ENST00000372755 CICQ96RK0 1608 aaPredicted RBP10.77□□□□□ -0.69
VCL-202ENST00000372755 PRAMEF27A3QJZ7 478 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 TMEM189-UBE2V1I3L0A0 370 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 CD38P28907 300 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 HOXC5Q00444 222 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 PAN3Q58A45 887 aaKnown RBP10.77□□□□□ -0.69
VCL-202ENST00000372755 PRAMEF9Q5VWM5 478 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 COX15Q7KZN9 410 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 ZFP82Q8N141 532 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 TFAP2CQ92754 450 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 SLC41A2Q96JW4 573 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 SLC19A3Q9BZV2 496 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 TREX1Q9NSU2 369 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 GPR45Q9Y5Y3 372 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 GYPBP06028 91 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 F3P13726 295 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 KCNJ10P78508 379 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 CTBSQ01459 385 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 CHRNEQ04844 493 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 TNK1Q13470 666 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 TBCEQ15813 527 aaPredicted RBP10.77□□□□□ -0.69
VCL-202ENST00000372755 AADACL3Q5VUY0 350 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 GRAMD2AQ8IUY3 354 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 LRRC56Q8IYG6 542 aaPredicted RBP10.77□□□□□ -0.69
VCL-202ENST00000372755 DMBX1Q8NFW5 382 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 ANKRD9Q96BM1 317 aaPredicted RBP10.77□□□□□ -0.69
VCL-202ENST00000372755 HAPLN2Q9GZV7 340 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 LHX6Q9UPM6 363 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 SNRNP70P08621 437 aaKnown RBP10.77□□□□□ -0.69
VCL-202ENST00000372755 OPRD1P41143 372 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 HOXA1P49639 335 aaPredicted RBP10.77□□□□□ -0.69
VCL-202ENST00000372755 SLC7A9P82251 487 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 OR7E24Q6IFN5 339 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 B3GNT8Q7Z7M8 397 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 LIN7BQ9HAP6 207 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 COL14A1Q05707 1796 aaKnown RBP10.77□□□□□ -0.69
VCL-202ENST00000372755 A0A0D9SG52 128 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 KRBA1A5PL33 1030 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 MCRIP1C9JLW8 97 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 TSTD3H0UI37 97 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 LCMT2O60294 686 aaKnown RBP10.77□□□□□ -0.69
VCL-202ENST00000372755 TGM6O95932 706 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 ACPPP15309 386 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 PDE7AQ13946 482 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 RUNX2Q13950 521 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 RFPL4BQ6ZWI9 263 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 OR56B4Q8NH76 319 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 SORT1Q99523 831 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 SLC29A1Q99808 456 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 MCOLN1Q9GZU1 580 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 SLC23A2Q9UGH3 650 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 TRAPPC2LQ9UL33 140 aa10.77□□□□□ -0.69
VCL-202ENST00000372755 MEIOCA2RUB1 952 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 GPR39O43194 453 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 ZNF264O43296 627 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 EIF4EP06730 217 aaKnown RBP10.76□□□□□ -0.69
VCL-202ENST00000372755 HOXB5P09067 269 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 AOAHP28039 575 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 CCR7P32248 378 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 MEX3DQ86XN8 651 aaKnown RBP10.76□□□□□ -0.69
VCL-202ENST00000372755 ZNF566Q969W8 418 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 TMIGD2Q96BF3 282 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 ZNF597Q96LX8 424 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 MACROD1Q9BQ69 325 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 MED16Q9Y2X0 877 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 PRSS21Q9Y6M0 314 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 TMEM212A6NML5 194 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 LIPCP11150 499 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 TACR3P29371 465 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 CTSCP53634 463 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 RAP2BP61225 183 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 TSPAN31Q12999 210 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 HEPHL1Q6MZM0 1159 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 LACC1Q8IV20 430 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 PHOSPHO2Q8TCD6 241 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 SMAP2Q8WU79 429 aaPredicted RBP10.76□□□□□ -0.69
VCL-202ENST00000372755 C1orf123Q9NWV4 160 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 EMC9Q9Y3B6 208 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 MED6O75586 246 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 SNCAP37840 140 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 SRPXP78539 464 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 COL9A2Q14055 689 aaPredicted RBP10.76□□□□□ -0.69
VCL-202ENST00000372755 LPCAT3Q6P1A2 487 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 ZNF480Q8WV37 535 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 PDLIM5Q96HC4 596 aaKnown RBP10.76□□□□□ -0.69
VCL-202ENST00000372755 TAAR2Q9P1P5 351 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 PLEKHM1Q9Y4G2 1056 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 ZNF705GA8MUZ8 300 aaPredicted RBP10.76□□□□□ -0.69
VCL-202ENST00000372755 A8MVM7 634 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 GABRPO00591 440 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 SUSD5O60279 629 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 SLC35A1P78382 337 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 CST9LP1Q5W188 147 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 FRMPD2BQ6IN97 320 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 RBMS3Q6XE24 437 aaKnown RBP10.76□□□□□ -0.69
VCL-202ENST00000372755 NAA40Q86UY6 237 aa10.76□□□□□ -0.69
VCL-202ENST00000372755 PIANPQ8IYJ0 282 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms