RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 PPP3CBP16298 524 aa20.12■□□□□ 0.81
COL9A2-201ENST00000372736 OR3A2P47893 321 aa20.12■□□□□ 0.81
COL9A2-201ENST00000372736 MAP2K6P52564 334 aa20.12■□□□□ 0.81
COL9A2-201ENST00000372736 ART1P52961 327 aa20.12■□□□□ 0.81
COL9A2-201ENST00000372736 CDK6Q00534 326 aa20.12■□□□□ 0.81
COL9A2-201ENST00000372736 ADRM1Q16186 407 aa20.12■□□□□ 0.81
COL9A2-201ENST00000372736 METTL21CQ5VZV1 264 aa20.12■□□□□ 0.81
COL9A2-201ENST00000372736 WBP2NLQ6ICG8 309 aa20.12■□□□□ 0.81
COL9A2-201ENST00000372736 CGB2Q6NT52 195 aa20.12■□□□□ 0.81
COL9A2-201ENST00000372736 REEP3Q6NUK4 255 aa20.12■□□□□ 0.81
COL9A2-201ENST00000372736 SPNS3Q6ZMD2 512 aa20.12■□□□□ 0.81
COL9A2-201ENST00000372736 DHDDSQ86SQ9 333 aa20.12■□□□□ 0.81
COL9A2-201ENST00000372736 CXorf67Q86X51 503 aaPredicted RBP20.12■□□□□ 0.81
COL9A2-201ENST00000372736 DDIT4LQ96D03 193 aa20.12■□□□□ 0.81
COL9A2-201ENST00000372736 ZHX1-C8orf76Q96EF9 292 aa20.12■□□□□ 0.81
COL9A2-201ENST00000372736 ACTR6Q9GZN1 396 aa20.12■□□□□ 0.81
COL9A2-201ENST00000372736 OR10A4Q9H209 315 aa20.12■□□□□ 0.81
COL9A2-201ENST00000372736 TMEM38AQ9H6F2 299 aa20.12■□□□□ 0.81
COL9A2-201ENST00000372736 ARMC7Q9H6L4 198 aa20.12■□□□□ 0.81
COL9A2-201ENST00000372736 CCM2LQ9NUG4 571 aaPredicted RBP20.12■□□□□ 0.81
COL9A2-201ENST00000372736 TMEM181Q9P2C4 612 aa20.12■□□□□ 0.81
COL9A2-201ENST00000372736 TRAPPC4Q9Y296 219 aa20.12■□□□□ 0.81
COL9A2-201ENST00000372736 GPR52Q9Y2T5 361 aa20.12■□□□□ 0.81
COL9A2-201ENST00000372736 NDUFAF1Q9Y375 327 aa20.12■□□□□ 0.81
COL9A2-201ENST00000372736 ANGPT2O15123 496 aa20.11■□□□□ 0.81
COL9A2-201ENST00000372736 FRS3O43559 492 aa20.11■□□□□ 0.81
COL9A2-201ENST00000372736 RAMP1O60894 148 aa20.11■□□□□ 0.81
COL9A2-201ENST00000372736 IMPDH2P12268 514 aa20.11■□□□□ 0.81
COL9A2-201ENST00000372736 LOXP28300 417 aaPredicted RBP20.11■□□□□ 0.81
COL9A2-201ENST00000372736 OR2B6P58173 313 aa20.11■□□□□ 0.81
COL9A2-201ENST00000372736 H3F3AP84243 136 aa20.11■□□□□ 0.81
COL9A2-201ENST00000372736 PDK3Q15120 406 aa20.11■□□□□ 0.81
COL9A2-201ENST00000372736 RUNDC3AQ59EK9 446 aa20.11■□□□□ 0.81
COL9A2-201ENST00000372736 COMTD1Q86VU5 262 aa20.11■□□□□ 0.81
COL9A2-201ENST00000372736 CADM2Q8N3J6 435 aa20.11■□□□□ 0.81
COL9A2-201ENST00000372736 PIGXQ8TBF5 258 aa20.11■□□□□ 0.81
COL9A2-201ENST00000372736 TSPEARQ8WU66 669 aa20.11■□□□□ 0.81
COL9A2-201ENST00000372736 SLC35B4Q969S0 331 aa20.11■□□□□ 0.81
COL9A2-201ENST00000372736 ZNF775Q96BV0 537 aaPredicted RBP20.11■□□□□ 0.81
COL9A2-201ENST00000372736 PRRC2AP48634 2157 aaKnown RBP20.11■□□□□ 0.81
COL9A2-201ENST00000372736 ITPR3Q14573 2671 aa20.1■□□□□ 0.81
COL9A2-201ENST00000372736 EVPLLA8MZ36 301 aa20.1■□□□□ 0.81
COL9A2-201ENST00000372736 ATE1O95260 518 aa20.1■□□□□ 0.81
COL9A2-201ENST00000372736 TROVE2P10155 538 aaKnown RBP eCLIP20.1■□□□□ 0.81
COL9A2-201ENST00000372736 PRKAR1BP31321 381 aa20.1■□□□□ 0.81
COL9A2-201ENST00000372736 SLC16A1P53985 500 aa20.1■□□□□ 0.81
COL9A2-201ENST00000372736 COPZ1P61923 177 aa20.1■□□□□ 0.81
COL9A2-201ENST00000372736 GUCY1A3Q02108 690 aa20.1■□□□□ 0.81
COL9A2-201ENST00000372736 SCARB2Q14108 478 aa20.1■□□□□ 0.81
COL9A2-201ENST00000372736 GALNT5Q7Z7M9 940 aa20.1■□□□□ 0.81
COL9A2-201ENST00000372736 PIK3IP1Q96FE7 263 aa20.1■□□□□ 0.81
COL9A2-201ENST00000372736 ANKRD27Q96NW4 1050 aa20.1■□□□□ 0.81
COL9A2-201ENST00000372736 HS3ST6Q96QI5 342 aa20.1■□□□□ 0.81
COL9A2-201ENST00000372736 CGREF1Q99674 301 aa20.1■□□□□ 0.81
COL9A2-201ENST00000372736 EMC3Q9P0I2 261 aa20.1■□□□□ 0.81
COL9A2-201ENST00000372736 PRSS50Q9UI38 385 aa20.1■□□□□ 0.81
COL9A2-201ENST00000372736 MAP1AP78559 2803 aaPredicted RBP20.1■□□□□ 0.81
COL9A2-201ENST00000372736 RAF1P04049 648 aa20.09■□□□□ 0.81
COL9A2-201ENST00000372736 DNASE1P24855 282 aa20.09■□□□□ 0.81
COL9A2-201ENST00000372736 CXCR1P25024 350 aa20.09■□□□□ 0.81
COL9A2-201ENST00000372736 SLC35A1P78382 337 aa20.09■□□□□ 0.81
COL9A2-201ENST00000372736 HOXC5Q00444 222 aa20.09■□□□□ 0.81
COL9A2-201ENST00000372736 SELPLGQ14242 412 aa20.09■□□□□ 0.81
COL9A2-201ENST00000372736 TSC22D1Q15714 1073 aa20.09■□□□□ 0.81
COL9A2-201ENST00000372736 DHRS4L2Q6PKH6 230 aa20.09■□□□□ 0.81
COL9A2-201ENST00000372736 Q6ZT83 130 aa20.09■□□□□ 0.81
COL9A2-201ENST00000372736 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.09■□□□□ 0.81
COL9A2-201ENST00000372736 CCDC103Q8IW40 242 aa20.09■□□□□ 0.81
COL9A2-201ENST00000372736 C3orf49Q96BT1 292 aa20.09■□□□□ 0.81
COL9A2-201ENST00000372736 S100PBPQ96BU1 408 aa20.09■□□□□ 0.81
COL9A2-201ENST00000372736 FOXC2Q99958 501 aa20.09■□□□□ 0.81
COL9A2-201ENST00000372736 CXXC4Q9H2H0 198 aa20.09■□□□□ 0.81
COL9A2-201ENST00000372736 CCDC134Q9H6E4 229 aa20.09■□□□□ 0.81
COL9A2-201ENST00000372736 EDARQ9UNE0 448 aa20.09■□□□□ 0.81
COL9A2-201ENST00000372736 RAI1Q7Z5J4 1906 aaPredicted RBP20.08■□□□□ 0.81
COL9A2-201ENST00000372736 TMEM229AB2RXF0 380 aa20.08■□□□□ 0.81
COL9A2-201ENST00000372736 ADAP00813 363 aa20.08■□□□□ 0.81
COL9A2-201ENST00000372736 SLC6A2P23975 617 aa20.08■□□□□ 0.81
COL9A2-201ENST00000372736 MTPNP58546 118 aa20.08■□□□□ 0.81
COL9A2-201ENST00000372736 BNIP2Q12982 314 aa20.08■□□□□ 0.81
COL9A2-201ENST00000372736 P2RY6Q15077 328 aa20.08■□□□□ 0.81
COL9A2-201ENST00000372736 HSP90B2PQ58FF3 399 aa20.08■□□□□ 0.81
COL9A2-201ENST00000372736 SFRP5Q5T4F7 317 aa20.08■□□□□ 0.81
COL9A2-201ENST00000372736 ATG4DQ86TL0 474 aaPredicted RBP20.08■□□□□ 0.81
COL9A2-201ENST00000372736 KRT73Q86Y46 540 aa20.08■□□□□ 0.81
COL9A2-201ENST00000372736 PTOV1Q86YD1 416 aa20.08■□□□□ 0.81
COL9A2-201ENST00000372736 STEAP2Q8NFT2 490 aa20.08■□□□□ 0.81
COL9A2-201ENST00000372736 MBD6Q96DN6 1003 aa20.08■□□□□ 0.81
COL9A2-201ENST00000372736 HDHD5Q9BXW7 423 aa20.08■□□□□ 0.81
COL9A2-201ENST00000372736 POTEKPQ9BYX7 375 aa20.08■□□□□ 0.81
COL9A2-201ENST00000372736 MED4Q9NPJ6 270 aa20.08■□□□□ 0.81
COL9A2-201ENST00000372736 LIPT2A6NK58 231 aa20.07■□□□□ 0.8
COL9A2-201ENST00000372736 FBP2O00757 339 aa20.07■□□□□ 0.8
COL9A2-201ENST00000372736 KLF4O43474 513 aa20.07■□□□□ 0.8
COL9A2-201ENST00000372736 TPST1O60507 370 aa20.07■□□□□ 0.8
COL9A2-201ENST00000372736 EIF1BO60739 113 aaKnown RBP20.07■□□□□ 0.8
COL9A2-201ENST00000372736 VIMP08670 466 aaKnown RBP20.07■□□□□ 0.8
COL9A2-201ENST00000372736 FPR1P21462 350 aa20.07■□□□□ 0.8
COL9A2-201ENST00000372736 NTF4P34130 210 aa20.07■□□□□ 0.8
COL9A2-201ENST00000372736 IDUAP35475 653 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms