RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 OR9A4Q8NGU2 314 aa10.65□□□□□ -0.7
PTPRF-203ENST00000372407 OR2T27Q8NH04 317 aa10.65□□□□□ -0.7
PTPRF-203ENST00000372407 PPP1R35Q8TAP8 253 aa10.65□□□□□ -0.7
PTPRF-203ENST00000372407 CDH20Q9HBT6 801 aa10.65□□□□□ -0.7
PTPRF-203ENST00000372407 SLC6A20Q9NP91 592 aa10.65□□□□□ -0.7
PTPRF-203ENST00000372407 LRFN1Q9P244 771 aa10.65□□□□□ -0.7
PTPRF-203ENST00000372407 COL4A5P29400 1685 aa10.65□□□□□ -0.7
PTPRF-203ENST00000372407 METTL15A6NJ78 407 aa10.65□□□□□ -0.7
PTPRF-203ENST00000372407 SULT1C2O00338 296 aa10.65□□□□□ -0.7
PTPRF-203ENST00000372407 AGPAT2O15120 278 aa10.65□□□□□ -0.7
PTPRF-203ENST00000372407 AQP9O43315 295 aa10.65□□□□□ -0.7
PTPRF-203ENST00000372407 GALR3O60755 368 aaPredicted RBP10.65□□□□□ -0.7
PTPRF-203ENST00000372407 PEX14O75381 377 aa10.65□□□□□ -0.7
PTPRF-203ENST00000372407 JUNBP17275 347 aaPredicted RBP10.65□□□□□ -0.7
PTPRF-203ENST00000372407 APEX1P27695 318 aaKnown RBP10.65□□□□□ -0.7
PTPRF-203ENST00000372407 CASP3P42574 277 aa10.65□□□□□ -0.7
PTPRF-203ENST00000372407 IDH3GP51553 393 aaPredicted RBP10.65□□□□□ -0.7
PTPRF-203ENST00000372407 MELKQ14680 651 aa10.65□□□□□ -0.7
PTPRF-203ENST00000372407 LAX1Q8IWV1 398 aa10.65□□□□□ -0.7
PTPRF-203ENST00000372407 NLGN4YQ8NFZ3 816 aaPredicted RBP10.65□□□□□ -0.7
PTPRF-203ENST00000372407 NEURL3Q96EH8 262 aa10.65□□□□□ -0.7
PTPRF-203ENST00000372407 PSD2Q9BQI7 771 aa10.65□□□□□ -0.7
PTPRF-203ENST00000372407 MS4A8Q9BY19 250 aa10.65□□□□□ -0.7
PTPRF-203ENST00000372407 OR10A5Q9H207 317 aa10.65□□□□□ -0.7
PTPRF-203ENST00000372407 OR10A2Q9H208 303 aa10.65□□□□□ -0.7
PTPRF-203ENST00000372407 CXorf36Q9H7Y0 433 aa10.65□□□□□ -0.7
PTPRF-203ENST00000372407 RANGRFQ9HD47 186 aaPredicted RBP10.65□□□□□ -0.7
PTPRF-203ENST00000372407 TXNL4BQ9NX01 149 aaKnown RBP10.65□□□□□ -0.7
PTPRF-203ENST00000372407 CA14Q9ULX7 337 aa10.65□□□□□ -0.7
PTPRF-203ENST00000372407 RPH3AQ9Y2J0 694 aaPredicted RBP10.65□□□□□ -0.7
PTPRF-203ENST00000372407 DNAJC13O75165 2243 aa10.65□□□□□ -0.7
PTPRF-203ENST00000372407 PHIPQ8WWQ0 1821 aa10.65□□□□□ -0.7
PTPRF-203ENST00000372407 UBBP0CG47 229 aa10.65□□□□□ -0.71
PTPRF-203ENST00000372407 UBCP0CG48 685 aaKnown RBP10.65□□□□□ -0.71
PTPRF-203ENST00000372407 OR8G3PP0DMU2 310 aa10.65□□□□□ -0.71
PTPRF-203ENST00000372407 ETV6P41212 452 aa10.65□□□□□ -0.71
PTPRF-203ENST00000372407 TAS2R20P59543 309 aa10.65□□□□□ -0.71
PTPRF-203ENST00000372407 SIRPAP78324 504 aa10.65□□□□□ -0.71
PTPRF-203ENST00000372407 ADARB1P78563 741 aaKnown RBP10.65□□□□□ -0.71
PTPRF-203ENST00000372407 SPOCK1Q08629 439 aa10.65□□□□□ -0.71
PTPRF-203ENST00000372407 CAMK2DQ13557 499 aa10.65□□□□□ -0.71
PTPRF-203ENST00000372407 NFATC4Q14934 902 aa10.65□□□□□ -0.71
PTPRF-203ENST00000372407 IL20RBQ6UXL0 311 aa10.65□□□□□ -0.71
PTPRF-203ENST00000372407 CD163Q86VB7 1156 aa10.65□□□□□ -0.71
PTPRF-203ENST00000372407 LIX1LQ8IVB5 337 aa10.65□□□□□ -0.71
PTPRF-203ENST00000372407 LILRB4Q8NHJ6 448 aa10.65□□□□□ -0.71
PTPRF-203ENST00000372407 RNF128Q8TEB7 428 aa10.65□□□□□ -0.71
PTPRF-203ENST00000372407 GHSRQ92847 366 aa10.65□□□□□ -0.71
PTPRF-203ENST00000372407 KATNB1Q9BVA0 655 aa10.65□□□□□ -0.71
PTPRF-203ENST00000372407 TUBB1Q9H4B7 451 aa10.65□□□□□ -0.71
PTPRF-203ENST00000372407 ZNF576Q9H609 170 aa10.65□□□□□ -0.71
PTPRF-203ENST00000372407 POU2F3Q9UKI9 436 aa10.65□□□□□ -0.71
PTPRF-203ENST00000372407 DIMT1Q9UNQ2 313 aaKnown RBP10.65□□□□□ -0.71
PTPRF-203ENST00000372407 HCFC2Q9Y5Z7 792 aa10.65□□□□□ -0.71
PTPRF-203ENST00000372407 BLACEA4D250 179 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 DPM1O60762 260 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 MTHFD2P13995 350 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 RPL35P42766 123 aaKnown RBP10.64□□□□□ -0.71
PTPRF-203ENST00000372407 ALDH3B1P43353 468 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 SULF2Q8IWU5 870 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 ENTHD1Q8IYW4 607 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 BOLLQ8N9W6 283 aaKnown RBP10.64□□□□□ -0.71
PTPRF-203ENST00000372407 ELP4Q96EB1 424 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 SNX18Q96RF0 628 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 HCSTQ9UBK5 93 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 OSGIN1Q9UJX0 560 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 LIPCP11150 499 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 ZNF28P17035 718 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 CR2P20023 1033 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 SSTR2P30874 369 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 TNFRSF4P43489 277 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 BCL2A1Q16548 175 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 NXNL2Q5VZ03 156 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 Q6ZNX1 250 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 GLB1L2Q8IW92 636 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 DNAAF1Q8NEP3 725 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 IL17RDQ8NFM7 739 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 TCTEX1D2Q8WW35 142 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 AP1S3Q96PC3 154 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 OR5M11Q96RB7 305 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 SLC22A12Q96S37 553 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 NXF5Q9H1B4 397 aaKnown RBP10.64□□□□□ -0.71
PTPRF-203ENST00000372407 TMEM38AQ9H6F2 299 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 NCDNQ9UBB6 729 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 TSPAN11A1L157 253 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 ACOD1A6NK06 481 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 HHLA1C9JL84 531 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 ZNF264O43296 627 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 F13BP05160 661 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 SNRPBP14678 240 aaKnown RBP10.64□□□□□ -0.71
PTPRF-203ENST00000372407 MAOBP27338 520 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 CTHP32929 405 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 SLC6A11P48066 632 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 SHHQ15465 462 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 ZNF595Q8IYB9 648 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 MFSD9Q8NBP5 474 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 STK35Q8TDR2 534 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 QRSL1Q9H0R6 528 aaKnown RBP10.64□□□□□ -0.71
PTPRF-203ENST00000372407 EPHX3Q9H6B9 360 aa10.64□□□□□ -0.71
PTPRF-203ENST00000372407 METTL17Q9H7H0 456 aaPredicted RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms