RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 GALNT11Q8NCW6 608 aa10.57□□□□□ -0.72
TSPAN1-201ENST00000372003 OR56B4Q8NH76 319 aa10.57□□□□□ -0.72
TSPAN1-201ENST00000372003 ACOT11Q8WXI4 607 aaPredicted RBP10.57□□□□□ -0.72
TSPAN1-201ENST00000372003 RGMAQ96B86 450 aa10.57□□□□□ -0.72
TSPAN1-201ENST00000372003 ERMAPQ96PL5 475 aaPredicted RBP10.57□□□□□ -0.72
TSPAN1-201ENST00000372003 WFDC6Q9BQY6 131 aa10.57□□□□□ -0.72
TSPAN1-201ENST00000372003 PPA2Q9H2U2 334 aa10.57□□□□□ -0.72
TSPAN1-201ENST00000372003 SEMA6CQ9H3T2 930 aa10.57□□□□□ -0.72
TSPAN1-201ENST00000372003 DDX31Q9H8H2 851 aaKnown RBP10.57□□□□□ -0.72
TSPAN1-201ENST00000372003 TRIM36Q9NQ86 728 aa10.57□□□□□ -0.72
TSPAN1-201ENST00000372003 SPHK1Q9NYA1 384 aa10.57□□□□□ -0.72
TSPAN1-201ENST00000372003 COL5A1P20908 1838 aaPredicted RBP10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 CD8B2A6NJW9 211 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 D6RAR5 112 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 PLPP2O43688 288 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 DKK1O94907 266 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 CD8BP10966 210 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 NAT1P18440 290 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 DNASE1P24855 282 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 CD79BP40259 229 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 REEP5Q00765 189 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 DHODHQ02127 395 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 EXOSC2Q13868 293 aaKnown RBP10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 GSG1Q2KHT4 349 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 LGALSLQ3ZCW2 172 aaPredicted RBP10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 ZNF311Q5JNZ3 666 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 PHF19Q5T6S3 580 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 SFXN4Q6P4A7 337 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 WDR74Q6RFH5 385 aaPredicted RBP10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 RTL4Q6ZR62 310 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 ASB18Q6ZVZ8 466 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 DGLUCYQ7Z3D6 616 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 PRSS42Q7Z5A4 293 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 KCTD20Q7Z5Y7 419 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 ADCK2Q7Z695 626 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 C17orf64Q86WR6 236 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 PLXDC1Q8IUK5 500 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 GPR135Q8IZ08 494 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 MMP21Q8N119 569 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 TOMM5Q8N4H5 51 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 RCBTB1Q8NDN9 531 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 OR4F15Q8NGB8 312 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 OR56A1Q8NGH5 318 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 OR2L8Q8NGY9 312 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 XAGE5Q8WWM1 108 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 DIO2Q92813 273 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 LCORQ96JN0 433 aaPredicted RBP10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 FAIM2Q9BWQ8 316 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 RAB11FIP5Q9BXF6 653 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 GSX2Q9BZM3 304 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 NUDT15Q9NV35 164 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 ACTR10Q9NZ32 417 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 OR6C2Q9NZP2 312 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 GLS2Q9UI32 602 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 SLC13A4Q9UKG4 626 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 PIEZO1Q92508 2521 aa10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 ARHGEF17Q96PE2 2063 aaPredicted RBP10.56□□□□□ -0.72
TSPAN1-201ENST00000372003 IGHV5-10-1A0A0J9YXX1 117 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 C2orf92A0A1B0GVN3 265 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 FAM221BA6H8Z2 402 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 NAP1L6A6NFF2 107 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 C2orf74A8MZ97 194 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 MEN1O00255 615 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 GPR171O14626 319 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 LRRTM2O43300 516 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 ZNF749O43361 778 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 HYAL3O43820 417 aaPredicted RBP10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 FZD7O75084 574 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 OR5F1O95221 314 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 APOL3O95236 402 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 TBX6O95947 436 aaPredicted RBP10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 EIF4EP06730 217 aaKnown RBP10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 H2AFB2P0C5Z0 115 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 SAGP10523 405 aaPredicted RBP10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 PAICSP22234 425 aaKnown RBP10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 PEBP1P30086 187 aaKnown RBP10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 NTSP30990 170 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 PRKAR1BP31321 381 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 ATP6V1E1P36543 226 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 FOXC1Q12948 553 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 SQSTM1Q13501 440 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 GALEQ14376 348 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 FAM69AQ5T7M9 428 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 TMEM65Q6PI78 240 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 ZNF620Q6ZNG0 422 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 PXKQ7Z7A4 578 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 COMTD1Q86VU5 262 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 KLBQ86Z14 1044 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 SLITRK4Q8IW52 837 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 FAM71CQ8NEG0 241 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 OR2T33Q8NG76 320 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 OR11H4Q8NGC9 324 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 OR4D9Q8NGE8 314 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 OR4Q3Q8NH05 313 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 HAVCR2Q8TDQ0 301 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 EXOSC8Q96B26 276 aaKnown RBP10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 ZDHHC12Q96GR4 267 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 MAP3K3Q99759 626 aa10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 SORBS1Q9BX66 1292 aaKnown RBP10.55□□□□□ -0.72
TSPAN1-201ENST00000372003 CACNG6Q9BXT2 260 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms