RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 LMF1Q96S06 567 aa26.53■■□□□ 1.84
SSBP3-204ENST00000371320 CNN2Q99439 309 aaKnown RBP26.53■■□□□ 1.84
SSBP3-204ENST00000371320 ZNF337Q9Y3M9 751 aa26.53■■□□□ 1.84
SSBP3-204ENST00000371320 MAP2K3P46734 347 aa26.52■■□□□ 1.84
SSBP3-204ENST00000371320 DEFB133Q30KQ1 61 aa26.52■■□□□ 1.84
SSBP3-204ENST00000371320 TPRA1Q86W33 373 aa26.52■■□□□ 1.84
SSBP3-204ENST00000371320 RFLNBQ8N5W9 214 aa26.52■■□□□ 1.84
SSBP3-204ENST00000371320 GATSQ8NAP1 163 aa26.52■■□□□ 1.84
SSBP3-204ENST00000371320 POMGNT2Q8NAT1 580 aa26.52■■□□□ 1.84
SSBP3-204ENST00000371320 KCTD12Q96CX2 325 aaKnown RBP26.52■■□□□ 1.84
SSBP3-204ENST00000371320 TTTY10Q9BZA0 68 aa26.52■■□□□ 1.84
SSBP3-204ENST00000371320 RNF121Q9H920 327 aa26.52■■□□□ 1.84
SSBP3-204ENST00000371320 FITM1A5D6W6 292 aa26.51■■□□□ 1.83
SSBP3-204ENST00000371320 TFP02787 698 aa26.51■■□□□ 1.83
SSBP3-204ENST00000371320 OR2T7P0C7T2 308 aa26.51■■□□□ 1.83
SSBP3-204ENST00000371320 GRM7Q14831 915 aa26.51■■□□□ 1.83
SSBP3-204ENST00000371320 MED25Q71SY5 747 aa26.51■■□□□ 1.83
SSBP3-204ENST00000371320 TDHQ8IZJ6 230 aa26.51■■□□□ 1.83
SSBP3-204ENST00000371320 OR7G1Q8NGA0 311 aa26.51■■□□□ 1.83
SSBP3-204ENST00000371320 OR2T27Q8NH04 317 aa26.51■■□□□ 1.83
SSBP3-204ENST00000371320 GHSRQ92847 366 aa26.51■■□□□ 1.83
SSBP3-204ENST00000371320 CLIP3Q96DZ5 547 aa26.51■■□□□ 1.83
SSBP3-204ENST00000371320 FRMD6Q96NE9 622 aa26.51■■□□□ 1.83
SSBP3-204ENST00000371320 TMEM43Q9BTV4 400 aa26.51■■□□□ 1.83
SSBP3-204ENST00000371320 YIPF2Q9BWQ6 316 aa26.51■■□□□ 1.83
SSBP3-204ENST00000371320 EXTL2Q9UBQ6 330 aa26.51■■□□□ 1.83
SSBP3-204ENST00000371320 OR7A10O76100 309 aa26.51■■□□□ 1.83
SSBP3-204ENST00000371320 LGALS3BPQ08380 585 aa26.51■■□□□ 1.83
SSBP3-204ENST00000371320 PON3Q15166 354 aa26.51■■□□□ 1.83
SSBP3-204ENST00000371320 QPRTQ15274 297 aa26.51■■□□□ 1.83
SSBP3-204ENST00000371320 TP53I3Q53FA7 332 aa26.51■■□□□ 1.83
SSBP3-204ENST00000371320 ACSM3Q53FZ2 586 aa26.51■■□□□ 1.83
SSBP3-204ENST00000371320 MZT2BQ6NZ67 158 aa26.51■■□□□ 1.83
SSBP3-204ENST00000371320 PXKQ7Z7A4 578 aa26.51■■□□□ 1.83
SSBP3-204ENST00000371320 MS4A15Q8N5U1 240 aa26.51■■□□□ 1.83
SSBP3-204ENST00000371320 CTRCQ99895 268 aa26.51■■□□□ 1.83
SSBP3-204ENST00000371320 HMX3A6NHT5 357 aa26.5■■□□□ 1.83
SSBP3-204ENST00000371320 SC5DO75845 299 aa26.5■■□□□ 1.83
SSBP3-204ENST00000371320 PRKAR1AP10644 381 aa26.5■■□□□ 1.83
SSBP3-204ENST00000371320 HPGDP15428 266 aa26.5■■□□□ 1.83
SSBP3-204ENST00000371320 BIKQ13323 160 aa26.5■■□□□ 1.83
SSBP3-204ENST00000371320 GGTLC2Q14390 218 aa26.5■■□□□ 1.83
SSBP3-204ENST00000371320 GXYLT1Q4G148 440 aa26.5■■□□□ 1.83
SSBP3-204ENST00000371320 NKAIN2Q5VXU1 208 aa26.5■■□□□ 1.83
SSBP3-204ENST00000371320 SFXN4Q6P4A7 337 aa26.5■■□□□ 1.83
SSBP3-204ENST00000371320 C17orf82Q86X59 251 aaPredicted RBP26.5■■□□□ 1.83
SSBP3-204ENST00000371320 ZSCAN1Q8NBB4 408 aa26.5■■□□□ 1.83
SSBP3-204ENST00000371320 ZNF486Q96H40 463 aaPredicted RBP26.5■■□□□ 1.83
SSBP3-204ENST00000371320 SLC19A3Q9BZV2 496 aa26.5■■□□□ 1.83
SSBP3-204ENST00000371320 PNO1Q9NRX1 252 aaKnown RBP26.5■■□□□ 1.83
SSBP3-204ENST00000371320 ST6GALNAC2Q9UJ37 374 aa26.5■■□□□ 1.83
SSBP3-204ENST00000371320 RBMX2Q9Y388 322 aaKnown RBP26.5■■□□□ 1.83
SSBP3-204ENST00000371320 CLCA3PQ9Y6N3 262 aa26.5■■□□□ 1.83
SSBP3-204ENST00000371320 NAA10P41227 235 aaPredicted RBP26.5■■□□□ 1.83
SSBP3-204ENST00000371320 INPP1P49441 399 aa26.5■■□□□ 1.83
SSBP3-204ENST00000371320 OR10A3P58181 314 aa26.5■■□□□ 1.83
SSBP3-204ENST00000371320 ACTA2P62736 377 aa26.5■■□□□ 1.83
SSBP3-204ENST00000371320 ACTG2P63267 376 aa26.5■■□□□ 1.83
SSBP3-204ENST00000371320 LRRC28Q86X40 367 aaPredicted RBP26.5■■□□□ 1.83
SSBP3-204ENST00000371320 ZNF527Q8NB42 609 aa26.5■■□□□ 1.83
SSBP3-204ENST00000371320 ZDHHC12Q96GR4 267 aa26.5■■□□□ 1.83
SSBP3-204ENST00000371320 UBL7Q96S82 380 aaPredicted RBP26.5■■□□□ 1.83
SSBP3-204ENST00000371320 NMNAT3Q96T66 252 aa26.5■■□□□ 1.83
SSBP3-204ENST00000371320 ENAMQ9NRM1 1142 aa26.5■■□□□ 1.83
SSBP3-204ENST00000371320 UBQLN4Q9NRR5 601 aa26.5■■□□□ 1.83
SSBP3-204ENST00000371320 EPHA6Q9UF33 1036 aa26.5■■□□□ 1.83
SSBP3-204ENST00000371320 CA14Q9ULX7 337 aa26.5■■□□□ 1.83
SSBP3-204ENST00000371320 RASD1Q9Y272 281 aa26.5■■□□□ 1.83
SSBP3-204ENST00000371320 ELOA3DA6NLF2 546 aaPredicted RBP26.49■■□□□ 1.83
SSBP3-204ENST00000371320 AGRPO00253 132 aa26.49■■□□□ 1.83
SSBP3-204ENST00000371320 TRAPPC2P0DI81 140 aa26.49■■□□□ 1.83
SSBP3-204ENST00000371320 TRAPPC2BP0DI82 140 aa26.49■■□□□ 1.83
SSBP3-204ENST00000371320 DDOSTP39656 456 aa26.49■■□□□ 1.83
SSBP3-204ENST00000371320 RACK1P63244 317 aaKnown RBP26.49■■□□□ 1.83
SSBP3-204ENST00000371320 TDGQ13569 410 aa26.49■■□□□ 1.83
SSBP3-204ENST00000371320 KCNAB1Q14722 419 aa26.49■■□□□ 1.83
SSBP3-204ENST00000371320 ELOA3BQ3SY89 546 aa26.49■■□□□ 1.83
SSBP3-204ENST00000371320 SLC35F2Q8IXU6 374 aa26.49■■□□□ 1.83
SSBP3-204ENST00000371320 ZNF687Q8N1G0 1237 aa26.49■■□□□ 1.83
SSBP3-204ENST00000371320 ELOA3Q8NG57 546 aa26.49■■□□□ 1.83
SSBP3-204ENST00000371320 PTPMT1Q8WUK0 201 aaPredicted RBP26.49■■□□□ 1.83
SSBP3-204ENST00000371320 KLHL1Q9NR64 748 aa26.49■■□□□ 1.83
SSBP3-204ENST00000371320 CYSLTR2Q9NS75 346 aa26.49■■□□□ 1.83
SSBP3-204ENST00000371320 RBFOX1Q9NWB1 397 aaKnown RBP26.49■■□□□ 1.83
SSBP3-204ENST00000371320 A0A1W2PRG6 482 aa26.48■■□□□ 1.83
SSBP3-204ENST00000371320 MAGEB4O15481 346 aaPredicted RBP26.48■■□□□ 1.83
SSBP3-204ENST00000371320 MBTPS2O43462 519 aa26.48■■□□□ 1.83
SSBP3-204ENST00000371320 THBS2P35442 1172 aa26.48■■□□□ 1.83
SSBP3-204ENST00000371320 DIO1P49895 249 aa26.48■■□□□ 1.83
SSBP3-204ENST00000371320 GBX2P52951 348 aaPredicted RBP26.48■■□□□ 1.83
SSBP3-204ENST00000371320 TBRG1Q3YBR2 411 aa26.48■■□□□ 1.83
SSBP3-204ENST00000371320 WBP2NLQ6ICG8 309 aa26.48■■□□□ 1.83
SSBP3-204ENST00000371320 PLET1Q6UQ28 207 aa26.48■■□□□ 1.83
SSBP3-204ENST00000371320 IL20RBQ6UXL0 311 aa26.48■■□□□ 1.83
SSBP3-204ENST00000371320 GHDCQ8N2G8 530 aa26.48■■□□□ 1.83
SSBP3-204ENST00000371320 NPEPL1Q8NDH3 523 aa26.48■■□□□ 1.83
SSBP3-204ENST00000371320 FAM71CQ8NEG0 241 aa26.48■■□□□ 1.83
SSBP3-204ENST00000371320 ST6GAL2Q96JF0 529 aa26.48■■□□□ 1.83
SSBP3-204ENST00000371320 CHRNA10Q9GZZ6 450 aa26.48■■□□□ 1.83
SSBP3-204ENST00000371320 NRIP3Q9NQ35 241 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms