RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 KCNJ5P48544 419 aa18.23■□□□□ 0.51
SMNDC1-201ENST00000369592 SLC16A1P53985 500 aa18.23■□□□□ 0.51
SMNDC1-201ENST00000369592 CDK6Q00534 326 aa18.23■□□□□ 0.51
SMNDC1-201ENST00000369592 REEP3Q6NUK4 255 aa18.23■□□□□ 0.51
SMNDC1-201ENST00000369592 SPNS3Q6ZMD2 512 aa18.23■□□□□ 0.51
SMNDC1-201ENST00000369592 ZNF550Q7Z398 422 aa18.23■□□□□ 0.51
SMNDC1-201ENST00000369592 SERPINA11Q86U17 422 aa18.23■□□□□ 0.51
SMNDC1-201ENST00000369592 PTOV1Q86YD1 416 aa18.23■□□□□ 0.51
SMNDC1-201ENST00000369592 NFKBIDQ8NI38 313 aa18.23■□□□□ 0.51
SMNDC1-201ENST00000369592 ANKRD27Q96NW4 1050 aa18.23■□□□□ 0.51
SMNDC1-201ENST00000369592 ZNF300Q96RE9 604 aaPredicted RBP18.23■□□□□ 0.51
SMNDC1-201ENST00000369592 POTEKPQ9BYX7 375 aa18.23■□□□□ 0.51
SMNDC1-201ENST00000369592 CXXC4Q9H2H0 198 aa18.23■□□□□ 0.51
SMNDC1-201ENST00000369592 C12orf49Q9H741 205 aa18.23■□□□□ 0.51
SMNDC1-201ENST00000369592 TMEM181Q9P2C4 612 aa18.23■□□□□ 0.51
SMNDC1-201ENST00000369592 CORO2BQ9UQ03 480 aa18.23■□□□□ 0.51
SMNDC1-201ENST00000369592 GPR52Q9Y2T5 361 aa18.23■□□□□ 0.51
SMNDC1-201ENST00000369592 MAP1AP78559 2803 aaPredicted RBP18.23■□□□□ 0.51
SMNDC1-201ENST00000369592 FBP2O00757 339 aa18.22■□□□□ 0.51
SMNDC1-201ENST00000369592 RAMP1O60894 148 aa18.22■□□□□ 0.51
SMNDC1-201ENST00000369592 NPIPB7O75200 414 aa18.22■□□□□ 0.51
SMNDC1-201ENST00000369592 TFPIP10646 304 aa18.22■□□□□ 0.51
SMNDC1-201ENST00000369592 UQCRBP14927 111 aa18.22■□□□□ 0.51
SMNDC1-201ENST00000369592 PPP3CBP16298 524 aa18.22■□□□□ 0.51
SMNDC1-201ENST00000369592 PRKAR1BP31321 381 aa18.22■□□□□ 0.51
SMNDC1-201ENST00000369592 NTF4P34130 210 aa18.22■□□□□ 0.51
SMNDC1-201ENST00000369592 IST1P53990 364 aa18.22■□□□□ 0.51
SMNDC1-201ENST00000369592 EXOC3L2Q2M3D2 409 aa18.22■□□□□ 0.51
SMNDC1-201ENST00000369592 ZNF311Q5JNZ3 666 aa18.22■□□□□ 0.51
SMNDC1-201ENST00000369592 WBP2NLQ6ICG8 309 aa18.22■□□□□ 0.51
SMNDC1-201ENST00000369592 DHRS4L2Q6PKH6 230 aa18.22■□□□□ 0.51
SMNDC1-201ENST00000369592 STK32CQ86UX6 486 aa18.22■□□□□ 0.51
SMNDC1-201ENST00000369592 CGREF1Q99674 301 aa18.22■□□□□ 0.51
SMNDC1-201ENST00000369592 MED18Q9BUE0 208 aa18.22■□□□□ 0.51
SMNDC1-201ENST00000369592 KLHL4Q9C0H6 718 aa18.22■□□□□ 0.51
SMNDC1-201ENST00000369592 MED4Q9NPJ6 270 aa18.22■□□□□ 0.51
SMNDC1-201ENST00000369592 CADP27708 2225 aa18.21■□□□□ 0.51
SMNDC1-201ENST00000369592 TMEM229AB2RXF0 380 aa18.21■□□□□ 0.51
SMNDC1-201ENST00000369592 CASKO14936 926 aa18.21■□□□□ 0.51
SMNDC1-201ENST00000369592 KLF4O43474 513 aa18.21■□□□□ 0.51
SMNDC1-201ENST00000369592 CCNA2P20248 432 aa18.21■□□□□ 0.51
SMNDC1-201ENST00000369592 PCBP3P57721 371 aaKnown RBP18.21■□□□□ 0.51
SMNDC1-201ENST00000369592 GUCY1A3Q02108 690 aa18.21■□□□□ 0.51
SMNDC1-201ENST00000369592 SELPLGQ14242 412 aa18.21■□□□□ 0.51
SMNDC1-201ENST00000369592 ANKRD34AQ69YU3 496 aa18.21■□□□□ 0.51
SMNDC1-201ENST00000369592 PAMR1Q6UXH9 720 aa18.21■□□□□ 0.51
SMNDC1-201ENST00000369592 NET1Q7Z628 596 aaPredicted RBP18.21■□□□□ 0.51
SMNDC1-201ENST00000369592 DHDDSQ86SQ9 333 aa18.21■□□□□ 0.51
SMNDC1-201ENST00000369592 C3orf49Q96BT1 292 aa18.21■□□□□ 0.51
SMNDC1-201ENST00000369592 ZNF226Q9NYT6 803 aa18.21■□□□□ 0.51
SMNDC1-201ENST00000369592 DNHD1Q96M86 4753 aa18.21■□□□□ 0.51
SMNDC1-201ENST00000369592 EVPLLA8MZ36 301 aa18.2■□□□□ 0.5
SMNDC1-201ENST00000369592 TPST1O60507 370 aa18.2■□□□□ 0.5
SMNDC1-201ENST00000369592 FZD7O75084 574 aa18.2■□□□□ 0.5
SMNDC1-201ENST00000369592 GZMMP51124 257 aa18.2■□□□□ 0.5
SMNDC1-201ENST00000369592 SFRP5Q5T4F7 317 aa18.2■□□□□ 0.5
SMNDC1-201ENST00000369592 Q6ZT83 130 aa18.2■□□□□ 0.5
SMNDC1-201ENST00000369592 ATG4DQ86TL0 474 aaPredicted RBP18.2■□□□□ 0.5
SMNDC1-201ENST00000369592 CXorf67Q86X51 503 aaPredicted RBP18.2■□□□□ 0.5
SMNDC1-201ENST00000369592 DDIT4LQ96D03 193 aa18.2■□□□□ 0.5
SMNDC1-201ENST00000369592 MBD6Q96DN6 1003 aa18.2■□□□□ 0.5
SMNDC1-201ENST00000369592 ZNF317Q96PQ6 595 aaPredicted RBP18.2■□□□□ 0.5
SMNDC1-201ENST00000369592 ARMC7Q9H6L4 198 aa18.2■□□□□ 0.5
SMNDC1-201ENST00000369592 KAT8Q9H7Z6 458 aaKnown RBP18.2■□□□□ 0.5
SMNDC1-201ENST00000369592 SAR1AQ9NR31 198 aa18.2■□□□□ 0.5
SMNDC1-201ENST00000369592 C6orf203Q9P0P8 240 aaPredicted RBP18.2■□□□□ 0.5
SMNDC1-201ENST00000369592 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.2■□□□□ 0.5
SMNDC1-201ENST00000369592 LIPT2A6NK58 231 aa18.19■□□□□ 0.5
SMNDC1-201ENST00000369592 C5orf58C9J3I9 102 aa18.19■□□□□ 0.5
SMNDC1-201ENST00000369592 ATP8B1O43520 1251 aa18.19■□□□□ 0.5
SMNDC1-201ENST00000369592 FRS3O43559 492 aa18.19■□□□□ 0.5
SMNDC1-201ENST00000369592 CNOT4O95628 575 aaKnown RBP18.19■□□□□ 0.5
SMNDC1-201ENST00000369592 TROVE2P10155 538 aaKnown RBP eCLIP18.19■□□□□ 0.5
SMNDC1-201ENST00000369592 ARFIP2P53365 341 aa18.19■□□□□ 0.5
SMNDC1-201ENST00000369592 SLC35A1P78382 337 aa18.19■□□□□ 0.5
SMNDC1-201ENST00000369592 SCARB2Q14108 478 aa18.19■□□□□ 0.5
SMNDC1-201ENST00000369592 P2RY6Q15077 328 aa18.19■□□□□ 0.5
SMNDC1-201ENST00000369592 POU4F3Q15319 338 aa18.19■□□□□ 0.5
SMNDC1-201ENST00000369592 GLIPR1L2Q4G1C9 344 aa18.19■□□□□ 0.5
SMNDC1-201ENST00000369592 C6orf89Q6UWU4 347 aa18.19■□□□□ 0.5
SMNDC1-201ENST00000369592 SEZ6L2Q6UXD5 910 aa18.19■□□□□ 0.5
SMNDC1-201ENST00000369592 CCDC103Q8IW40 242 aa18.19■□□□□ 0.5
SMNDC1-201ENST00000369592 LSMEM1Q8N8F7 131 aa18.19■□□□□ 0.5
SMNDC1-201ENST00000369592 PIGXQ8TBF5 258 aa18.19■□□□□ 0.5
SMNDC1-201ENST00000369592 ZNF775Q96BV0 537 aaPredicted RBP18.19■□□□□ 0.5
SMNDC1-201ENST00000369592 DNAJA3Q96EY1 480 aa18.19■□□□□ 0.5
SMNDC1-201ENST00000369592 FOXC2Q99958 501 aa18.19■□□□□ 0.5
SMNDC1-201ENST00000369592 HDHD5Q9BXW7 423 aa18.19■□□□□ 0.5
SMNDC1-201ENST00000369592 ACTR6Q9GZN1 396 aa18.19■□□□□ 0.5
SMNDC1-201ENST00000369592 FANCFQ9NPI8 374 aa18.19■□□□□ 0.5
SMNDC1-201ENST00000369592 PRSS50Q9UI38 385 aa18.19■□□□□ 0.5
SMNDC1-201ENST00000369592 NAV3Q8IVL0 2385 aa18.19■□□□□ 0.5
SMNDC1-201ENST00000369592 FXYD1O00168 92 aa18.18■□□□□ 0.5
SMNDC1-201ENST00000369592 ANGPT2O15123 496 aa18.18■□□□□ 0.5
SMNDC1-201ENST00000369592 EIF1BO60739 113 aaKnown RBP18.18■□□□□ 0.5
SMNDC1-201ENST00000369592 ATE1O95260 518 aa18.18■□□□□ 0.5
SMNDC1-201ENST00000369592 COX5AP20674 150 aa18.18■□□□□ 0.5
SMNDC1-201ENST00000369592 FPR1P21462 350 aa18.18■□□□□ 0.5
SMNDC1-201ENST00000369592 HTR2AP28223 471 aa18.18■□□□□ 0.5
SMNDC1-201ENST00000369592 P2RY4P51582 365 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms