RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 OR52E4Q8NGH9 312 aa9.1□□□□□ -0.95
CLRN3-201ENST00000368671 PIGXQ8TBF5 258 aa9.1□□□□□ -0.95
CLRN3-201ENST00000368671 ROPN1LQ96C74 230 aa9.1□□□□□ -0.95
CLRN3-201ENST00000368671 RADILQ96JH8 1075 aa9.1□□□□□ -0.95
CLRN3-201ENST00000368671 DHRS9Q9BPW9 319 aa9.1□□□□□ -0.95
CLRN3-201ENST00000368671 CCDC106Q9BWC9 280 aa9.1□□□□□ -0.95
CLRN3-201ENST00000368671 DPY30Q9C005 99 aa9.1□□□□□ -0.95
CLRN3-201ENST00000368671 OR11A1Q9GZK7 315 aa9.1□□□□□ -0.95
CLRN3-201ENST00000368671 ASB6Q9NWX5 421 aa9.1□□□□□ -0.95
CLRN3-201ENST00000368671 TAS2R16Q9NYV7 291 aa9.1□□□□□ -0.95
CLRN3-201ENST00000368671 MGAT4BQ9UQ53 548 aa9.1□□□□□ -0.95
CLRN3-201ENST00000368671 SLC35A3Q9Y2D2 325 aa9.1□□□□□ -0.95
CLRN3-201ENST00000368671 SLC25A15Q9Y619 301 aa9.1□□□□□ -0.95
CLRN3-201ENST00000368671 PRR14LQ5THK1 2151 aa9.1□□□□□ -0.95
CLRN3-201ENST00000368671 NSD1Q96L73 2696 aaPredicted RBP9.09□□□□□ -0.95
CLRN3-201ENST00000368671 USF3Q68DE3 2245 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 GOLGA8QA0A0J9YX86 632 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 WDR91A4D1P6 747 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 GOLGA8OA6NCC3 632 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 CLDN24A6NM45 220 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 GOLGA8NF8WBI6 632 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 GPR171O14626 319 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 ANKRD28O15084 1053 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 ITM2AO43736 263 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 MRPL33O75394 65 aaKnown RBP9.09□□□□□ -0.95
CLRN3-201ENST00000368671 PMS2P2O95744 297 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 AGR2O95994 175 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 UQCRC2P22695 453 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 PTAFRP25105 342 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 NTF4P34130 210 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 MAGEA8P43361 318 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 KHKP50053 298 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 HPCAP84074 193 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 FUT5Q11128 374 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 RAB35Q15286 201 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 GABRA6Q16445 453 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 C6orf52Q5T4I8 152 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 EMBQ6PCB8 327 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 CASP12Q6UXS9 341 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 FRRS1Q6ZNA5 592 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 C1orf229Q6ZS94 237 aaPredicted RBP9.09□□□□□ -0.95
CLRN3-201ENST00000368671 GRINAQ7Z429 371 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 MUC15Q8N387 334 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 ARFGAP2Q8N6H7 521 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 ZNF525Q8N782 197 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 ZNF781Q8N8C0 355 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 FAM71CQ8NEG0 241 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 MIPOL1Q8TD10 442 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 PKNOX2Q96KN3 472 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 MANSC1Q9H8J5 431 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.09□□□□□ -0.95
CLRN3-201ENST00000368671 ASIC5Q9NY37 505 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 UPB1Q9UBR1 384 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 LGALS13Q9UHV8 139 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 HDGFL3Q9Y3E1 203 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 ATP23Q9Y6H3 246 aa9.09□□□□□ -0.95
CLRN3-201ENST00000368671 ANK3Q12955 4377 aaKnown RBP9.09□□□□□ -0.95
CLRN3-201ENST00000368671 A0A096LNT2 108 aa9.08□□□□□ -0.96
CLRN3-201ENST00000368671 AP3D1O14617 1153 aa9.08□□□□□ -0.96
CLRN3-201ENST00000368671 C1QCP02747 245 aa9.08□□□□□ -0.96
CLRN3-201ENST00000368671 ITGA5P08648 1049 aa9.08□□□□□ -0.96
CLRN3-201ENST00000368671 NUDT17P0C025 328 aa9.08□□□□□ -0.96
CLRN3-201ENST00000368671 CHI3L1P36222 383 aaPredicted RBP9.08□□□□□ -0.96
CLRN3-201ENST00000368671 IDH2P48735 452 aaKnown RBP9.08□□□□□ -0.96
CLRN3-201ENST00000368671 DSCR9P59020 149 aa9.08□□□□□ -0.96
CLRN3-201ENST00000368671 KCNJ10P78508 379 aa9.08□□□□□ -0.96
CLRN3-201ENST00000368671 TMEM249Q2WGJ8 235 aa9.08□□□□□ -0.96
CLRN3-201ENST00000368671 SAXO2Q658L1 398 aa9.08□□□□□ -0.96
CLRN3-201ENST00000368671 OR7E24Q6IFN5 339 aa9.08□□□□□ -0.96
CLRN3-201ENST00000368671 ADGRG3Q86Y34 549 aa9.08□□□□□ -0.96
CLRN3-201ENST00000368671 NUDCD3Q8IVD9 361 aa9.08□□□□□ -0.96
CLRN3-201ENST00000368671 VPS37AQ8NEZ2 397 aa9.08□□□□□ -0.96
CLRN3-201ENST00000368671 OR10H5Q8NGA6 315 aa9.08□□□□□ -0.96
CLRN3-201ENST00000368671 OR8J2Q8NGG1 315 aa9.08□□□□□ -0.96
CLRN3-201ENST00000368671 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.08□□□□□ -0.96
CLRN3-201ENST00000368671 ZG16BQ96DA0 208 aa9.08□□□□□ -0.96
CLRN3-201ENST00000368671 TNFRSF13CQ96RJ3 184 aa9.08□□□□□ -0.96
CLRN3-201ENST00000368671 SLC35A5Q9BS91 424 aa9.08□□□□□ -0.96
CLRN3-201ENST00000368671 INPP5KQ9BT40 448 aa9.08□□□□□ -0.96
CLRN3-201ENST00000368671 AKTIPQ9H8T0 292 aa9.08□□□□□ -0.96
CLRN3-201ENST00000368671 POLE3Q9NRF9 147 aa9.08□□□□□ -0.96
CLRN3-201ENST00000368671 TMEM181Q9P2C4 612 aa9.08□□□□□ -0.96
CLRN3-201ENST00000368671 MALT1Q9UDY8 824 aa9.08□□□□□ -0.96
CLRN3-201ENST00000368671 MARCOQ9UEW3 520 aaPredicted RBP9.08□□□□□ -0.96
CLRN3-201ENST00000368671 TMED7-TICAM2A0A0A6YYA0 188 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 PRSS51A0A1B0GVH4 220 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 TMEM72A0PK05 275 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 DNPH1O43598 174 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 SCN2BO60939 215 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 IMPDH2P12268 514 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 SLC25A16P16260 332 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 ZNF16P17020 682 aaPredicted RBP9.07□□□□□ -0.96
CLRN3-201ENST00000368671 ETV4P43268 484 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 CLK1P49759 484 aaKnown RBP9.07□□□□□ -0.96
CLRN3-201ENST00000368671 SLC16A1P53985 500 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 PHC1P78364 1004 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 SLC25A3Q00325 362 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 PLAURQ03405 335 aa9.07□□□□□ -0.96
CLRN3-201ENST00000368671 LOXL1Q08397 574 aaPredicted RBP9.07□□□□□ -0.96
CLRN3-201ENST00000368671 CHI3L2Q15782 390 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms