RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 GCAP28676 217 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 HTR1FP30939 366 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 RDXP35241 583 aaKnown RBP2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 BTDP43251 543 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 TIMM10P62072 90 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 SLC10A7Q0GE19 358 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 SLC15A2Q16348 729 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 ZNF630Q2M218 657 aaPredicted RBP2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 CFAP221Q4G0U5 840 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 BCL7AQ4VC05 210 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 EOGTQ5NDL2 527 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 PDZK1Q5T2W1 519 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 TMEM225Q6GV28 225 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 KRTAP5-7Q6L8G8 165 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 ZSCAN25Q6NSZ9 544 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 PMF1Q6P1K2 205 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 CASC1Q6TDU7 716 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 RGS9BPQ6ZS82 235 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 RNF175Q8N4F7 328 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 ALLCQ8N6M5 410 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 OR8J1Q8NGP2 316 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 OR9A1PQ8NGU1 263 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 DCUN1D4Q92564 292 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 FGF11Q92914 225 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 ELSPBP1Q96BH3 223 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 COQ2Q96H96 371 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 CCNL2Q96S94 520 aaPredicted RBP2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 ARHGDIGQ99819 225 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 CD274Q9NZQ7 290 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 STAP1Q9ULZ2 295 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 MRPS7Q9Y2R9 242 aaKnown RBP2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 UGT2A1Q9Y4X1 527 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 KIF16BQ96L93 1317 aa2.35□□□□□ -2.03
ECHDC1-201ENST00000368287 ATAD2BQ9ULI0 1458 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 TRAV26-1A0A087WT03 109 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 WI2-2373I1.2A0A1W2PRP0 233 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 E7ESA3 106 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 GFYI3L273 518 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 DCTN6O00399 190 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 MBTPS2O43462 519 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 PFKFB2O60825 505 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 ECI2O75521 394 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 DIRAS1O95057 198 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 LALBAP00709 142 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 IL1BP01584 269 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 LGALS2P05162 132 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 ATP6V1B2P21281 511 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 PRPHP41219 470 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 MAP3K8P41279 467 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 QARSP47897 775 aaKnown RBP2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 KLK7P49862 253 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 EFNB2P52799 333 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 APOC4P55056 127 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 CHRNB3Q05901 458 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 CCDC173Q0VFZ6 552 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 DMRTC1Q5HYR2 192 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 KLF17Q5JT82 389 aaPredicted RBP2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 OR4F3Q6IEY1 312 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 WDR74Q6RFH5 385 aaPredicted RBP2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 RFLNAQ6ZTI6 216 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 DHDDSQ86SQ9 333 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 SLC35F2Q8IXU6 374 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 C6orf223Q8N319 242 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 ZCCHC7Q8N3Z6 543 aaKnown RBP2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 MFSD9Q8NBP5 474 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 RNF138Q8WVD3 245 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 TCTEX1D2Q8WW35 142 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 SLC38A2Q96QD8 506 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 TMEM43Q9BTV4 400 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 CAPS2Q9BXY5 557 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 VCX2Q9H322 139 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 SMYD3Q9H7B4 428 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 KIF25Q9UIL4 384 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 IFT52Q9Y366 437 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 SLCO1B1Q9Y6L6 691 aa2.34□□□□□ -2.03
ECHDC1-201ENST00000368287 ATP10AO60312 1499 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 C15orf38-AP3S2A0A0A6YYH1 394 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 KIR2DL5BA0A0G2JN68 375 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 KIR2DL5BA0A0G2JPC4 375 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 PSMB11A5LHX3 300 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 USP27XA6NNY8 438 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 IDSB3KWA1 339 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 F5H6K3 240 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 FOXE1O00358 373 aaPredicted RBP2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 NBR2O15453 112 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 ZNF208O43345 1280 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 RIPK2O43353 540 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 TRAF3IP2O43734 574 aaPredicted RBP2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 PRKAB2O43741 272 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 ZNF861PO60384 105 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 RAMP3O60896 148 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 N4BP1O75113 896 aaKnown RBP2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 ZNF780AO75290 641 aaPredicted RBP2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 SURF6O75683 361 aaKnown RBP2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 MMP23AO75900 390 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 ATP5LO75964 103 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 SUPT7LO94864 414 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 CAPN1P07384 714 aa2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 TAGLN2P37802 199 aaKnown RBP2.33□□□□□ -2.04
ECHDC1-201ENST00000368287 TDO2P48775 406 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms