RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 IGHV2OR16-5A0A0B4J2B6 119 aa12.56□□□□□ -0.4
VAMP4-202ENST00000367740 OR6C65A6NJZ3 312 aa12.56□□□□□ -0.4
VAMP4-202ENST00000367740 VSTM5A8MXK1 200 aa12.56□□□□□ -0.4
VAMP4-202ENST00000367740 NPIPB9F8W1W9 429 aa12.56□□□□□ -0.4
VAMP4-202ENST00000367740 M0R233 179 aa12.56□□□□□ -0.4
VAMP4-202ENST00000367740 ZNF264O43296 627 aa12.56□□□□□ -0.4
VAMP4-202ENST00000367740 SYNGR3O43761 229 aa12.56□□□□□ -0.4
VAMP4-202ENST00000367740 DNAJA2O60884 412 aa12.56□□□□□ -0.4
VAMP4-202ENST00000367740 ULK1O75385 1050 aa12.56□□□□□ -0.4
VAMP4-202ENST00000367740 NCR1O76036 304 aa12.56□□□□□ -0.4
VAMP4-202ENST00000367740 IGKV3-15P01624 115 aa12.56□□□□□ -0.4
VAMP4-202ENST00000367740 TFPIP10646 304 aa12.56□□□□□ -0.4
VAMP4-202ENST00000367740 UBL4AP11441 157 aa12.56□□□□□ -0.4
VAMP4-202ENST00000367740 TCN1P20061 433 aaPredicted RBP12.56□□□□□ -0.4
VAMP4-202ENST00000367740 OMGP23515 440 aa12.56□□□□□ -0.4
VAMP4-202ENST00000367740 SESN3P58005 492 aa12.56□□□□□ -0.4
VAMP4-202ENST00000367740 H3F3AP84243 136 aa12.56□□□□□ -0.4
VAMP4-202ENST00000367740 CDC73Q6P1J9 531 aa12.56□□□□□ -0.4
VAMP4-202ENST00000367740 Q6ZPA2 131 aa12.56□□□□□ -0.4
VAMP4-202ENST00000367740 LSRQ86X29 649 aaPredicted RBP12.56□□□□□ -0.4
VAMP4-202ENST00000367740 ZNF614Q8N883 585 aa12.56□□□□□ -0.4
VAMP4-202ENST00000367740 JADE3Q92613 823 aa12.56□□□□□ -0.4
VAMP4-202ENST00000367740 ZDHHC16Q969W1 377 aa12.56□□□□□ -0.4
VAMP4-202ENST00000367740 SLC25A28Q96A46 364 aa12.56□□□□□ -0.4
VAMP4-202ENST00000367740 CIDECQ96AQ7 238 aaPredicted RBP12.56□□□□□ -0.4
VAMP4-202ENST00000367740 TMIGD2Q96BF3 282 aa12.56□□□□□ -0.4
VAMP4-202ENST00000367740 CITED1Q99966 193 aa12.56□□□□□ -0.4
VAMP4-202ENST00000367740 MRPL37Q9BZE1 423 aaKnown RBP12.56□□□□□ -0.4
VAMP4-202ENST00000367740 C7orf69Q9H7B7 122 aa12.56□□□□□ -0.4
VAMP4-202ENST00000367740 REV1Q9UBZ9 1251 aa12.56□□□□□ -0.4
VAMP4-202ENST00000367740 CLDN34H7C241 214 aa12.55□□□□□ -0.4
VAMP4-202ENST00000367740 PIP5K1BO14986 540 aa12.55□□□□□ -0.4
VAMP4-202ENST00000367740 PIN1P1O15428 100 aa12.55□□□□□ -0.4
VAMP4-202ENST00000367740 PDPK1O15530 556 aa12.55□□□□□ -0.4
VAMP4-202ENST00000367740 EIF4E2O60573 245 aaKnown RBP12.55□□□□□ -0.4
VAMP4-202ENST00000367740 SMIM24O75264 130 aa12.55□□□□□ -0.4
VAMP4-202ENST00000367740 LGI1O95970 557 aa12.55□□□□□ -0.4
VAMP4-202ENST00000367740 ATP6V1C1P21283 382 aa12.55□□□□□ -0.4
VAMP4-202ENST00000367740 PAX7P23759 505 aa12.55□□□□□ -0.4
VAMP4-202ENST00000367740 UBE2NP61088 152 aaKnown RBP12.55□□□□□ -0.4
VAMP4-202ENST00000367740 SKP2Q13309 424 aa12.55□□□□□ -0.4
VAMP4-202ENST00000367740 SNTB2Q13425 540 aaKnown RBP12.55□□□□□ -0.4
VAMP4-202ENST00000367740 SLC17A1Q14916 467 aa12.55□□□□□ -0.4
VAMP4-202ENST00000367740 RASA2Q15283 850 aa12.55□□□□□ -0.4
VAMP4-202ENST00000367740 KLHL7Q8IXQ5 586 aa12.55□□□□□ -0.4
VAMP4-202ENST00000367740 BCL2L2Q92843 193 aaPredicted RBP12.55□□□□□ -0.4
VAMP4-202ENST00000367740 TMEM45BQ96B21 275 aa12.55□□□□□ -0.4
VAMP4-202ENST00000367740 THUMPD3Q9BV44 507 aaKnown RBP12.55□□□□□ -0.4
VAMP4-202ENST00000367740 ZNF416Q9BWM5 594 aa12.55□□□□□ -0.4
VAMP4-202ENST00000367740 C1QTNF3Q9BXJ4 246 aa12.55□□□□□ -0.4
VAMP4-202ENST00000367740 HOXD1Q9GZZ0 328 aa12.55□□□□□ -0.4
VAMP4-202ENST00000367740 NELFAQ9H3P2 528 aa12.55□□□□□ -0.4
VAMP4-202ENST00000367740 DUSP22Q9NRW4 184 aa12.55□□□□□ -0.4
VAMP4-202ENST00000367740 TMEM45AQ9NWC5 275 aa12.55□□□□□ -0.4
VAMP4-202ENST00000367740 OXSMQ9NWU1 459 aa12.55□□□□□ -0.4
VAMP4-202ENST00000367740 ZNF69Q9UC07 566 aa12.55□□□□□ -0.4
VAMP4-202ENST00000367740 DTNAQ9Y4J8 743 aa12.55□□□□□ -0.4
VAMP4-202ENST00000367740 TENM3Q9P273 2699 aa12.55□□□□□ -0.4
VAMP4-202ENST00000367740 COL7A1Q02388 2944 aa12.55□□□□□ -0.4
VAMP4-202ENST00000367740 CCDC151A5D8V7 595 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 KNG1P01042 644 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 GSNP06396 782 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 GSTA2P09210 222 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 RBP1P09455 135 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 GATA3P23771 443 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 HMOX2P30519 316 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 HSD17B3P37058 310 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 ALDH3B1P43353 468 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 ATP12AP54707 1039 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 MRPS11P82912 194 aaKnown RBP12.54□□□□□ -0.4
VAMP4-202ENST00000367740 CLCQ05315 142 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 SLC9A3R2Q15599 337 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 AVPI1Q5T686 147 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 SAXO2Q658L1 398 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 KRT80Q6KB66 452 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 ANKRD26P1Q6NSI1 321 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 ZCCHC12Q6PEW1 402 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 BRICD5Q6PL45 260 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 C17orf107Q6ZR85 190 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 BCL6BQ8N143 479 aaPredicted RBP12.54□□□□□ -0.4
VAMP4-202ENST00000367740 FAM169BQ8N8A8 192 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 POMGNT2Q8NAT1 580 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 METTL6Q8TCB7 284 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 UBE2FQ969M7 185 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 RAB39BQ96DA2 213 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 STACQ99469 402 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 RBM4BQ9BQ04 359 aaKnown RBP12.54□□□□□ -0.4
VAMP4-202ENST00000367740 CCDC106Q9BWC9 280 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 OR11A1Q9GZK7 315 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 VPS11Q9H270 941 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 MS4A5Q9H3V2 200 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 NOX3Q9HBY0 568 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 CHRNA9Q9UGM1 479 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 HDGFL3Q9Y3E1 203 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 CMAHPQ9Y471 501 aa12.54□□□□□ -0.4
VAMP4-202ENST00000367740 POLR3HQ9Y535 204 aaPredicted RBP12.54□□□□□ -0.4
VAMP4-202ENST00000367740 A8MT66 165 aa12.53□□□□□ -0.4
VAMP4-202ENST00000367740 SKAP2O75563 359 aaPredicted RBP12.53□□□□□ -0.4
VAMP4-202ENST00000367740 IGHV2-5P01817 119 aa12.53□□□□□ -0.4
VAMP4-202ENST00000367740 EVX1P49640 407 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms