RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 GPR39O43194 453 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 ALPPL2P10696 532 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 EIF1P41567 113 aaKnown RBP3.52□□□□□ -1.85
SYNE1-207ENST00000367255 BDKRB1P46663 353 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 WDR5P61964 334 aaKnown RBP3.52□□□□□ -1.85
SYNE1-207ENST00000367255 Q6AWC8 147 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 REP15Q6BDI9 236 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 FA2HQ7L5A8 372 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 WDR31Q8NA23 367 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 ZNF680Q8NEM1 530 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 IL12RB2Q99665 862 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 RAB18Q9NP72 206 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 TNFSF12O43508 249 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 ATAD3CQ5T2N8 411 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 DTWD1Q8N5C7 304 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 OR4K15Q8NH41 348 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 MFSD3Q96ES6 412 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 CYSLTR2Q9NS75 346 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 TMX2-CTNND1H3BSU7 103 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 EIF1BO60739 113 aaKnown RBP3.52□□□□□ -1.85
SYNE1-207ENST00000367255 ADH1CP00326 375 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 SLC10A3P09131 477 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 MPZP25189 248 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 ACVR1Q04771 509 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 SHEQ5VZ18 495 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 LCTLQ6UWM7 567 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 OTOP2Q7RTS6 562 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 ABHD12BQ7Z5M8 362 aaPredicted RBP3.52□□□□□ -1.85
SYNE1-207ENST00000367255 OR4K17Q8NGC6 315 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 P2RX4Q99571 388 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 IGFLR1Q9H665 355 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 ACOXLQ9NUZ1 547 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 PCDHA9Q9Y5H5 950 aa3.52□□□□□ -1.85
SYNE1-207ENST00000367255 THP07101 528 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 HCKP08631 526 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 MPC1LP0DKB6 136 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 SUMO3P55854 103 aaPredicted RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 CD83Q01151 205 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 DMWDQ09019 674 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 TEX261Q6UWH6 196 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 ZNF614Q8N883 585 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 DYNC2LI1Q8TCX1 351 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 EBF4Q9BQW3 602 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 SPNS1Q9H2V7 528 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 FZD3Q9NPG1 666 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 U3KQ87 197 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 RPS10-NUDT3A0A1W2PQS6 291 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 LRCH4O75427 683 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 TMEM107Q6UX40 140 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 TMEM156Q8N614 296 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 OR4K5Q8NGD3 323 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 OR8D1Q8WZ84 308 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 TIMM22Q9Y584 194 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 ONECUT3O60422 494 aaPredicted RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 EOMESO95936 686 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 OPRD1P41143 372 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 PMCHL1Q16048 86 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 TRAPPC12Q8WVT3 735 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 ST3GAL6Q9Y274 331 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 SCAMP2O15127 329 aaKnown RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 H2AFB2P0C5Z0 115 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 LAMP1P11279 417 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 TAF9Q16594 264 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 SFT2D3Q587I9 215 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 ZNF808Q8N4W9 903 aaPredicted RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 ZNRF4Q8WWF5 429 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 Q9N2J8 555 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 C1QTNF3-AMACRE9PGA6 284 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 CTSAP10619 480 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 TAS2R40P59535 323 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 TCRBV7S3A2A0A539 114 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 J3QR06 171 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 S1PR4O95977 384 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 DRD5P21918 477 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 BACE1P56817 501 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 OR6K6Q8NGW6 343 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 TWSG1Q9GZX9 223 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 TSPAN10Q9H1Z9 355 aaPredicted RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 RHBGQ9H310 441 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 SERINC1Q9NRX5 453 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 SPANXB1Q9NS25 103 aaPredicted RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 TMEM140Q9NV12 185 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 GPR34Q9UPC5 381 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 M0QYT0 321 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 M0R2N6 131 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 KHDC3LQ587J8 217 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 STEAP3Q658P3 488 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 GALNTL5Q7Z4T8 443 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 OR5R1Q8NH85 324 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 ZNF2Q9BSG1 426 aaPredicted RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 PLEKHA1Q9HB21 404 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 CCNL1Q9UK58 526 aaPredicted RBP3.51□□□□□ -1.85
SYNE1-207ENST00000367255 C2orf78A6NCI8 922 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 MANBAO00462 879 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 PTHP01270 115 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 DBHP09172 617 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 MMP16P51512 607 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 TAS2R45P59539 299 aa3.51□□□□□ -1.85
SYNE1-207ENST00000367255 RNF4P78317 190 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms