RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 ZNF556Q9HAH1 456 aa18.68■□□□□ 0.58
SHISA4-201ENST00000362011 MRPS18CQ9Y3D5 142 aaKnown RBP18.68■□□□□ 0.58
SHISA4-201ENST00000362011 C7orf72A4D263 438 aa18.67■□□□□ 0.58
SHISA4-201ENST00000362011 SUSD5O60279 629 aa18.67■□□□□ 0.58
SHISA4-201ENST00000362011 ADAP00813 363 aa18.67■□□□□ 0.58
SHISA4-201ENST00000362011 TCEA1P23193 301 aaKnown RBP18.67■□□□□ 0.58
SHISA4-201ENST00000362011 IGFBP5P24593 272 aa18.67■□□□□ 0.58
SHISA4-201ENST00000362011 ADH6P28332 368 aa18.67■□□□□ 0.58
SHISA4-201ENST00000362011 CD97P48960 835 aa18.67■□□□□ 0.58
SHISA4-201ENST00000362011 PRKCDQ05655 676 aa18.67■□□□□ 0.58
SHISA4-201ENST00000362011 GLYR1Q49A26 553 aaPredicted RBP18.67■□□□□ 0.58
SHISA4-201ENST00000362011 C1orf94Q6P1W5 598 aa18.67■□□□□ 0.58
SHISA4-201ENST00000362011 IZUMO2Q6UXV1 221 aa18.67■□□□□ 0.58
SHISA4-201ENST00000362011 ADGRG3Q86Y34 549 aa18.67■□□□□ 0.58
SHISA4-201ENST00000362011 LURAP1LQ8IV03 231 aa18.67■□□□□ 0.58
SHISA4-201ENST00000362011 NRMQ8IXM6 262 aa18.67■□□□□ 0.58
SHISA4-201ENST00000362011 PFN4Q8NHR9 129 aa18.67■□□□□ 0.58
SHISA4-201ENST00000362011 POC1BQ8TC44 478 aa18.67■□□□□ 0.58
SHISA4-201ENST00000362011 DNAJC9Q8WXX5 260 aa18.67■□□□□ 0.58
SHISA4-201ENST00000362011 NPAS1Q99742 590 aa18.67■□□□□ 0.58
SHISA4-201ENST00000362011 TTTY12Q9BZ98 90 aa18.67■□□□□ 0.58
SHISA4-201ENST00000362011 SLC19A3Q9BZV2 496 aa18.67■□□□□ 0.58
SHISA4-201ENST00000362011 TMEM5Q9Y2B1 443 aa18.67■□□□□ 0.58
SHISA4-201ENST00000362011 ORC6Q9Y5N6 252 aa18.67■□□□□ 0.58
SHISA4-201ENST00000362011 TMEM72A0PK05 275 aa18.66■□□□□ 0.58
SHISA4-201ENST00000362011 SHISA8B8ZZ34 492 aa18.66■□□□□ 0.58
SHISA4-201ENST00000362011 H0YJX3 145 aa18.66■□□□□ 0.58
SHISA4-201ENST00000362011 KPNA4O00629 521 aaPredicted RBP18.66■□□□□ 0.58
SHISA4-201ENST00000362011 GASTP01350 101 aa18.66■□□□□ 0.58
SHISA4-201ENST00000362011 RFPL3SP0C7P2 107 aa18.66■□□□□ 0.58
SHISA4-201ENST00000362011 IFI30P13284 250 aa18.66■□□□□ 0.58
SHISA4-201ENST00000362011 CCNA2P20248 432 aa18.66■□□□□ 0.58
SHISA4-201ENST00000362011 OMPP47874 163 aa18.66■□□□□ 0.58
SHISA4-201ENST00000362011 LSM11P83369 360 aaKnown RBP eCLIP18.66■□□□□ 0.58
SHISA4-201ENST00000362011 KDM4DQ6B0I6 523 aa18.66■□□□□ 0.58
SHISA4-201ENST00000362011 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.66■□□□□ 0.58
SHISA4-201ENST00000362011 CDK20Q8IZL9 346 aa18.66■□□□□ 0.58
SHISA4-201ENST00000362011 ZFP62Q8NB50 900 aaPredicted RBP18.66■□□□□ 0.58
SHISA4-201ENST00000362011 NIPSNAP1Q9BPW8 284 aa18.66■□□□□ 0.58
SHISA4-201ENST00000362011 DGCR6LQ9BY27 220 aa18.66■□□□□ 0.58
SHISA4-201ENST00000362011 OR2B2Q9GZK3 357 aa18.66■□□□□ 0.58
SHISA4-201ENST00000362011 UBQLN3Q9H347 655 aa18.66■□□□□ 0.58
SHISA4-201ENST00000362011 ZNF703Q9H7S9 590 aaPredicted RBP18.66■□□□□ 0.58
SHISA4-201ENST00000362011 SERINC1Q9NRX5 453 aa18.66■□□□□ 0.58
SHISA4-201ENST00000362011 KRT84Q9NSB2 600 aa18.66■□□□□ 0.58
SHISA4-201ENST00000362011 TMEFF2Q9UIK5 374 aaPredicted RBP18.66■□□□□ 0.58
SHISA4-201ENST00000362011 POFUT2Q9Y2G5 429 aa18.66■□□□□ 0.58
SHISA4-201ENST00000362011 IGKV1D-42A0A075B6H8 117 aa18.65■□□□□ 0.58
SHISA4-201ENST00000362011 ACOT7O00154 380 aa18.65■□□□□ 0.58
SHISA4-201ENST00000362011 ZIC3O60481 467 aa18.65■□□□□ 0.58
SHISA4-201ENST00000362011 PDGFAP04085 211 aa18.65■□□□□ 0.58
SHISA4-201ENST00000362011 ZNF17P17021 662 aa18.65■□□□□ 0.58
SHISA4-201ENST00000362011 RAD23AP54725 363 aa18.65■□□□□ 0.58
SHISA4-201ENST00000362011 AQP4P55087 323 aa18.65■□□□□ 0.58
SHISA4-201ENST00000362011 CTBP2P56545 445 aa18.65■□□□□ 0.58
SHISA4-201ENST00000362011 IL1RL1Q01638 556 aa18.65■□□□□ 0.58
SHISA4-201ENST00000362011 ALDH6A1Q02252 535 aaKnown RBP18.65■□□□□ 0.58
SHISA4-201ENST00000362011 CRYZQ08257 329 aaKnown RBP18.65■□□□□ 0.58
SHISA4-201ENST00000362011 ZNF169Q14929 603 aaPredicted RBP18.65■□□□□ 0.58
SHISA4-201ENST00000362011 HYAL4Q2M3T9 481 aa18.65■□□□□ 0.58
SHISA4-201ENST00000362011 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.65■□□□□ 0.58
SHISA4-201ENST00000362011 RFX4Q33E94 735 aa18.65■□□□□ 0.58
SHISA4-201ENST00000362011 LRRK2Q5S007 2527 aa18.65■□□□□ 0.58
SHISA4-201ENST00000362011 RAET1LQ5VY80 246 aa18.65■□□□□ 0.58
SHISA4-201ENST00000362011 C5orf46Q6UWT4 87 aa18.65■□□□□ 0.58
SHISA4-201ENST00000362011 ZER1Q7Z7L7 766 aa18.65■□□□□ 0.58
SHISA4-201ENST00000362011 GTPBP8Q8N3Z3 284 aaPredicted RBP18.65■□□□□ 0.58
SHISA4-201ENST00000362011 OR14L1PQ8NHC6 308 aa18.65■□□□□ 0.58
SHISA4-201ENST00000362011 STK35Q8TDR2 534 aa18.65■□□□□ 0.58
SHISA4-201ENST00000362011 GTPBP3Q969Y2 492 aaKnown RBP18.65■□□□□ 0.58
SHISA4-201ENST00000362011 ABHD17AQ96GS6 310 aa18.65■□□□□ 0.58
SHISA4-201ENST00000362011 FAM46AQ96IP4 442 aaKnown RBP18.65■□□□□ 0.58
SHISA4-201ENST00000362011 RDH12Q96NR8 316 aa18.65■□□□□ 0.58
SHISA4-201ENST00000362011 MEPEQ9NQ76 525 aaPredicted RBP18.65■□□□□ 0.58
SHISA4-201ENST00000362011 SMPD3Q9NY59 655 aaPredicted RBP18.65■□□□□ 0.58
SHISA4-201ENST00000362011 CHRNA9Q9UGM1 479 aa18.65■□□□□ 0.58
SHISA4-201ENST00000362011 RPH3AQ9Y2J0 694 aaPredicted RBP18.65■□□□□ 0.58
SHISA4-201ENST00000362011 SPIN1Q9Y657 262 aaPredicted RBP18.65■□□□□ 0.58
SHISA4-201ENST00000362011 HTR3EA5X5Y0 456 aa18.64■□□□□ 0.57
SHISA4-201ENST00000362011 ENO4A6NNW6 628 aa18.64■□□□□ 0.57
SHISA4-201ENST00000362011 TRAPPC6AO75865 159 aa18.64■□□□□ 0.57
SHISA4-201ENST00000362011 GLSO94925 669 aaPredicted RBP18.64■□□□□ 0.57
SHISA4-201ENST00000362011 IGF2P01344 180 aa18.64■□□□□ 0.57
SHISA4-201ENST00000362011 POU2F1P14859 743 aa18.64■□□□□ 0.57
SHISA4-201ENST00000362011 CDH2P19022 906 aaPredicted RBP18.64■□□□□ 0.57
SHISA4-201ENST00000362011 ELK4P28324 431 aa18.64■□□□□ 0.57
SHISA4-201ENST00000362011 RFC3P40938 356 aa18.64■□□□□ 0.57
SHISA4-201ENST00000362011 MAP2K6P52564 334 aa18.64■□□□□ 0.57
SHISA4-201ENST00000362011 SELENBP1Q13228 472 aa18.64■□□□□ 0.57
SHISA4-201ENST00000362011 IGFBP7Q16270 282 aa18.64■□□□□ 0.57
SHISA4-201ENST00000362011 TMEM44Q2T9K0 475 aa18.64■□□□□ 0.57
SHISA4-201ENST00000362011 C3orf33Q6P1S2 294 aa18.64■□□□□ 0.57
SHISA4-201ENST00000362011 SLC22A16Q86VW1 577 aa18.64■□□□□ 0.57
SHISA4-201ENST00000362011 LSRQ86X29 649 aaPredicted RBP18.64■□□□□ 0.57
SHISA4-201ENST00000362011 P3H2Q8IVL5 708 aa18.64■□□□□ 0.57
SHISA4-201ENST00000362011 FAM83FQ8NEG4 500 aaPredicted RBP18.64■□□□□ 0.57
SHISA4-201ENST00000362011 OR5M1Q8NGP8 315 aa18.64■□□□□ 0.57
SHISA4-201ENST00000362011 BPIFA2Q96DR5 249 aa18.64■□□□□ 0.57
SHISA4-201ENST00000362011 PIGQQ9BRB3 760 aa18.64■□□□□ 0.57
SHISA4-201ENST00000362011 UCK2Q9BZX2 261 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms