RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 RP1P56715 2156 aa20.75■□□□□ 0.91
LDB1-201ENST00000361198 SERINC4A6NH21 518 aa20.75■□□□□ 0.91
LDB1-201ENST00000361198 PSMD4P55036 377 aaKnown RBP20.75■□□□□ 0.91
LDB1-201ENST00000361198 INSL4Q14641 139 aa20.75■□□□□ 0.91
LDB1-201ENST00000361198 KLHL12Q53G59 568 aa20.75■□□□□ 0.91
LDB1-201ENST00000361198 SNAP47Q5SQN1 464 aa20.75■□□□□ 0.91
LDB1-201ENST00000361198 NOXA1Q86UR1 476 aa20.75■□□□□ 0.91
LDB1-201ENST00000361198 KISS1RQ969F8 398 aaPredicted RBP20.75■□□□□ 0.91
LDB1-201ENST00000361198 TMEM43Q9BTV4 400 aa20.75■□□□□ 0.91
LDB1-201ENST00000361198 B3GAT2Q9NPZ5 323 aa20.75■□□□□ 0.91
LDB1-201ENST00000361198 PNO1Q9NRX1 252 aaKnown RBP20.75■□□□□ 0.91
LDB1-201ENST00000361198 CENPBD1B2RD01 187 aa20.74■□□□□ 0.91
LDB1-201ENST00000361198 NCR1O76036 304 aa20.74■□□□□ 0.91
LDB1-201ENST00000361198 YES1P07947 543 aa20.74■□□□□ 0.91
LDB1-201ENST00000361198 MYF5P13349 255 aa20.74■□□□□ 0.91
LDB1-201ENST00000361198 GALNSP34059 522 aa20.74■□□□□ 0.91
LDB1-201ENST00000361198 KLBQ86Z14 1044 aa20.74■□□□□ 0.91
LDB1-201ENST00000361198 UBE2J2Q8N2K1 259 aa20.74■□□□□ 0.91
LDB1-201ENST00000361198 FYTTD1Q96QD9 318 aaKnown RBP20.74■□□□□ 0.91
LDB1-201ENST00000361198 TTYH2Q9BSA4 534 aa20.74■□□□□ 0.91
LDB1-201ENST00000361198 MCCC2Q9HCC0 563 aa20.74■□□□□ 0.91
LDB1-201ENST00000361198 PRODH2Q9UF12 536 aa20.74■□□□□ 0.91
LDB1-201ENST00000361198 C12orf71A8MTZ7 269 aa20.74■□□□□ 0.91
LDB1-201ENST00000361198 PRR23D1E9PI22 279 aaPredicted RBP20.74■□□□□ 0.91
LDB1-201ENST00000361198 PPP1R3DO95685 299 aa20.74■□□□□ 0.91
LDB1-201ENST00000361198 PRR23D2P0DMB1 279 aaPredicted RBP20.74■□□□□ 0.91
LDB1-201ENST00000361198 NOS3P29474 1203 aa20.74■□□□□ 0.91
LDB1-201ENST00000361198 HSD11B2P80365 405 aa20.74■□□□□ 0.91
LDB1-201ENST00000361198 MADCAM1Q13477 382 aa20.74■□□□□ 0.91
LDB1-201ENST00000361198 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.74■□□□□ 0.917e-7■■□□□ 13.3
LDB1-201ENST00000361198 MZT2BQ6NZ67 158 aa20.74■□□□□ 0.91
LDB1-201ENST00000361198 TRILQ7L0X0 811 aa20.74■□□□□ 0.91
LDB1-201ENST00000361198 CMIPQ8IY22 773 aa20.74■□□□□ 0.91
LDB1-201ENST00000361198 SLC25A45Q8N413 288 aa20.74■□□□□ 0.91
LDB1-201ENST00000361198 ACBD7Q8N6N7 88 aa20.74■□□□□ 0.91
LDB1-201ENST00000361198 DNASE2BQ8WZ79 361 aa20.74■□□□□ 0.91
LDB1-201ENST00000361198 TIMP4Q99727 224 aa20.74■□□□□ 0.91
LDB1-201ENST00000361198 SLX1AQ9BQ83 275 aa20.74■□□□□ 0.91
LDB1-201ENST00000361198 PELOQ9BRX2 385 aaKnown RBP20.74■□□□□ 0.91
LDB1-201ENST00000361198 ISG20L2Q9H9L3 353 aaKnown RBP20.74■□□□□ 0.91
LDB1-201ENST00000361198 RPS6KB2Q9UBS0 482 aa20.74■□□□□ 0.91
LDB1-201ENST00000361198 C2orf92A0A1B0GVN3 265 aa20.73■□□□□ 0.91
LDB1-201ENST00000361198 A8MUA0 341 aa20.73■□□□□ 0.91
LDB1-201ENST00000361198 BCAT2O15382 392 aaPredicted RBP20.73■□□□□ 0.91
LDB1-201ENST00000361198 NUDT21O43809 227 aaKnown RBP20.73■□□□□ 0.91
LDB1-201ENST00000361198 ZSWIM7Q19AV6 140 aa20.73■□□□□ 0.91
LDB1-201ENST00000361198 RTL4Q6ZR62 310 aa20.73■□□□□ 0.91
LDB1-201ENST00000361198 SLC35F3Q8IY50 421 aa20.73■□□□□ 0.91
LDB1-201ENST00000361198 OR4C6Q8NH72 309 aa20.73■□□□□ 0.91
LDB1-201ENST00000361198 TSLPQ969D9 159 aa20.73■□□□□ 0.91
LDB1-201ENST00000361198 UBL7Q96S82 380 aaPredicted RBP20.73■□□□□ 0.91
LDB1-201ENST00000361198 TBX5Q99593 518 aa20.73■□□□□ 0.91
LDB1-201ENST00000361198 OR51V1Q9H2C8 321 aa20.73■□□□□ 0.91
LDB1-201ENST00000361198 PAQR5Q9NXK6 330 aaPredicted RBP20.73■□□□□ 0.91
LDB1-201ENST00000361198 ADAM30Q9UKF2 790 aa20.73■□□□□ 0.91
LDB1-201ENST00000361198 SLC35A3Q9Y2D2 325 aa20.73■□□□□ 0.91
LDB1-201ENST00000361198 CD8B2A6NJW9 211 aa20.73■□□□□ 0.91
LDB1-201ENST00000361198 EFCAB7A8K855 629 aa20.73■□□□□ 0.91
LDB1-201ENST00000361198 GTPBP1O00178 669 aaKnown RBP20.73■□□□□ 0.91
LDB1-201ENST00000361198 TRIM3O75382 744 aaPredicted RBP20.73■□□□□ 0.91
LDB1-201ENST00000361198 PRKAR1AP10644 381 aa20.73■□□□□ 0.91
LDB1-201ENST00000361198 CLUP10909 449 aa20.73■□□□□ 0.91
LDB1-201ENST00000361198 CD8BP10966 210 aa20.73■□□□□ 0.91
LDB1-201ENST00000361198 AFF3P51826 1226 aaKnown RBP20.73■□□□□ 0.91
LDB1-201ENST00000361198 SLC37A1P57057 533 aa20.73■□□□□ 0.91
LDB1-201ENST00000361198 IL18Q14116 193 aa20.73■□□□□ 0.91
LDB1-201ENST00000361198 MED25Q71SY5 747 aa20.73■□□□□ 0.91
LDB1-201ENST00000361198 TCTE3Q8IZS6 198 aa20.73■□□□□ 0.91
LDB1-201ENST00000361198 TMEM99Q8N816 258 aa20.73■□□□□ 0.91
LDB1-201ENST00000361198 CYB561A3Q8NBI2 242 aa20.73■□□□□ 0.91
LDB1-201ENST00000361198 ACOT12Q8WYK0 555 aa20.73■□□□□ 0.91
LDB1-201ENST00000361198 TEAD3Q99594 435 aa20.73■□□□□ 0.91
LDB1-201ENST00000361198 TMEM246Q9BRR3 403 aa20.73■□□□□ 0.91
LDB1-201ENST00000361198 BABAM2Q9NXR7 383 aa20.73■□□□□ 0.91
LDB1-201ENST00000361198 FBXL4Q9UKA2 621 aa20.73■□□□□ 0.91
LDB1-201ENST00000361198 GMEB2Q9UKD1 530 aa20.73■□□□□ 0.91
LDB1-201ENST00000361198 RNF13O43567 381 aa20.72■□□□□ 0.91
LDB1-201ENST00000361198 SLC19A2O60779 497 aa20.72■□□□□ 0.91
LDB1-201ENST00000361198 REM1O75628 298 aa20.72■□□□□ 0.91
LDB1-201ENST00000361198 MTNR1BP49286 362 aa20.72■□□□□ 0.91
LDB1-201ENST00000361198 ARL4DP49703 201 aa20.72■□□□□ 0.91
LDB1-201ENST00000361198 CRMP1Q14194 572 aa20.72■□□□□ 0.91
LDB1-201ENST00000361198 TATDN3Q17R31 274 aa20.72■□□□□ 0.91
LDB1-201ENST00000361198 C6orf183Q5T699 404 aa20.72■□□□□ 0.91
LDB1-201ENST00000361198 LIX1LQ8IVB5 337 aa20.72■□□□□ 0.91
LDB1-201ENST00000361198 OR1L3Q8NH93 324 aa20.72■□□□□ 0.91
LDB1-201ENST00000361198 KCNN2Q9H2S1 579 aa20.72■□□□□ 0.91
LDB1-201ENST00000361198 MALT1Q9UDY8 824 aa20.72■□□□□ 0.91
LDB1-201ENST00000361198 KLHL21Q9UJP4 597 aa20.72■□□□□ 0.91
LDB1-201ENST00000361198 BOLA1Q9Y3E2 137 aa20.72■□□□□ 0.91
LDB1-201ENST00000361198 NOX1Q9Y5S8 564 aa20.72■□□□□ 0.91
LDB1-201ENST00000361198 A0A1B0GVT2 93 aa20.71■□□□□ 0.91
LDB1-201ENST00000361198 TTC36A6NLP5 189 aa20.71■□□□□ 0.91
LDB1-201ENST00000361198 LRRN3E7EW58 273 aa20.71■□□□□ 0.91
LDB1-201ENST00000361198 LYRM1O43325 122 aa20.71■□□□□ 0.91
LDB1-201ENST00000361198 SLC16A1P53985 500 aa20.71■□□□□ 0.91
LDB1-201ENST00000361198 RPS7P62081 194 aaKnown RBP20.71■□□□□ 0.91
LDB1-201ENST00000361198 BIKQ13323 160 aa20.71■□□□□ 0.91
LDB1-201ENST00000361198 KLHL26Q53HC5 615 aa20.71■□□□□ 0.91
LDB1-201ENST00000361198 TIGD3Q6B0B8 471 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms