RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 ZNF620Q6ZNG0 422 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 NRARPQ7Z6K4 114 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 NRMQ8IXM6 262 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 UBQLNLQ8IYU4 475 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 SAMD14Q8IZD0 417 aaPredicted RBP6.73□□□□□ -1.33
CLCN3-202ENST00000360642 ARIH2OSQ8N7S6 290 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 C11orf44Q8N8P7 122 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 OR4K14Q8NGD5 310 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 TMEM255BQ8WV15 326 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 SLC22A18Q96BI1 424 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 DIRC2Q96SL1 478 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 CDCA3Q99618 268 aaPredicted RBP6.73□□□□□ -1.33
CLCN3-202ENST00000360642 KATNB1Q9BVA0 655 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 PRRG3Q9BZD7 231 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 TMEM74BQ9NUR3 256 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 NLGN3Q9NZ94 848 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 PHF11Q9UIL8 331 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 POU2F3Q9UKI9 436 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 PILRAQ9UKJ1 303 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 TRDV1A0A1B0GX56 115 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 A0A1W2PQL4 384 aaPredicted RBP6.73□□□□□ -1.33
CLCN3-202ENST00000360642 IFNL4K9M1U5 179 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 CDC42EP2O14613 210 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 SLC30A4O14863 429 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 LALBAP00709 142 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 IL7P13232 177 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 LAMP2P13473 410 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 RPS4Y1P22090 263 aaKnown RBP6.73□□□□□ -1.33
CLCN3-202ENST00000360642 CPN2P22792 545 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 IFNA8P32881 189 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 CDH11P55287 796 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 CLDN2P57739 230 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 KIR2DS3Q14952 304 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 BCL2A1Q16548 175 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 DUSP5Q16690 384 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 TMEM44Q2T9K0 475 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 ZNF628Q5EBL2 1059 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 NXNL2Q5VZ03 156 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 ENPP7Q6UWV6 458 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 PLEKHM3Q6ZWE6 761 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 RRM2BQ7LG56 351 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 SHFQ7M4L6 423 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 PEX5LQ8IYB4 626 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 CCL4L1Q8NHW4 92 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 DOK4Q8TEW6 326 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 UFD1Q92890 307 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 RFKQ969G6 155 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 SDF2Q99470 211 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 PRSS27Q9BQR3 290 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 SRMSQ9H3Y6 488 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 TRIM45Q9H8W5 580 aaPredicted RBP6.73□□□□□ -1.33
CLCN3-202ENST00000360642 PTGFRNQ9P2B2 879 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 GRIP1Q9Y3R0 1128 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 SLC22A7Q9Y694 548 aa6.73□□□□□ -1.33
CLCN3-202ENST00000360642 CENPVL1A0A0U1RR11 272 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 HTR3EA5X5Y0 456 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 SLC35G6P0C7Q6 338 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 HTR1FP30939 366 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 GPR4P46093 362 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 ERVFRD-1P60508 538 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 NFATC4Q14934 902 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 PGGHGQ32M88 737 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 C9orf50Q5SZB4 431 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 XKRXQ6PP77 449 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 SYT14Q8NB59 555 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 OR4F15Q8NGB8 312 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 BMFQ96LC9 184 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 NEDD4LQ96PU5 975 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 CTRCQ99895 268 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 NDC1Q9BTX1 674 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 ZNF350Q9GZX5 532 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 LMAN2LQ9H0V9 348 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 SCML1Q9UN30 329 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 C19orf53Q9UNZ5 99 aaPredicted RBP6.72□□□□□ -1.33
CLCN3-202ENST00000360642 WDR45Q9Y484 360 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 LINC01565O15544 149 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 LYPD3O95274 346 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 CH25HO95992 272 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 EIF2S1P05198 315 aaKnown RBP6.72□□□□□ -1.33
CLCN3-202ENST00000360642 CPMP14384 443 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 OR2B6P58173 313 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 SIM1P81133 766 aaPredicted RBP6.72□□□□□ -1.33
CLCN3-202ENST00000360642 FOXO1Q12778 655 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 ERV3-1Q14264 604 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 DEFB134Q4QY38 66 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 TMEM200BQ69YZ2 307 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 ANKRD54Q6NXT1 300 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 FAM180AQ6UWF9 173 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 LHFPL3Q86UP9 236 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 OR4N5Q8IXE1 308 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 SCAIQ8N9R8 606 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 OR6F1Q8NGZ6 308 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 SLC35B4Q969S0 331 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 KIAA1143Q96AT1 154 aaPredicted RBP6.72□□□□□ -1.33
CLCN3-202ENST00000360642 COQ7Q99807 217 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 SOSTQ9BQB4 213 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 PIGUQ9H490 435 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 TIGARQ9NQ88 270 aa6.72□□□□□ -1.33
CLCN3-202ENST00000360642 ZNF223Q9UK11 482 aaPredicted RBP6.72□□□□□ -1.33
CLCN3-202ENST00000360642 SLC7A7Q9UM01 511 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms