RNA–Protein interactions for RNA: ENST00000359902.2

CCDC88B-203, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 1 (best) BASIC

Gene CCDC88B, Length 2,326 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-203ENST00000359902 NRG3P56975 720 aa19.09■□□□□ 0.65
CCDC88B-203ENST00000359902 C17orf82Q86X59 251 aaPredicted RBP19.09■□□□□ 0.65
CCDC88B-203ENST00000359902 SCAIQ8N9R8 606 aa19.09■□□□□ 0.65
CCDC88B-203ENST00000359902 OR51L1Q8NGJ5 315 aa19.09■□□□□ 0.65
CCDC88B-203ENST00000359902 UBL7Q96S82 380 aaPredicted RBP19.09■□□□□ 0.65
CCDC88B-203ENST00000359902 PDE7BQ9NP56 450 aa19.09■□□□□ 0.65
CCDC88B-203ENST00000359902 PRODH2Q9UF12 536 aa19.09■□□□□ 0.65
CCDC88B-203ENST00000359902 ST6GALNAC2Q9UJ37 374 aa19.09■□□□□ 0.65
CCDC88B-203ENST00000359902 HMX3A6NHT5 357 aa19.08■□□□□ 0.65
CCDC88B-203ENST00000359902 METTL12A8MUP2 240 aa19.08■□□□□ 0.65
CCDC88B-203ENST00000359902 H0YIG0 161 aa19.08■□□□□ 0.65
CCDC88B-203ENST00000359902 SRFP11831 508 aa19.08■□□□□ 0.65
CCDC88B-203ENST00000359902 OR10A3P58181 314 aa19.08■□□□□ 0.65
CCDC88B-203ENST00000359902 SERTAD2Q14140 314 aa19.08■□□□□ 0.65
CCDC88B-203ENST00000359902 TCTE1Q5JU00 501 aa19.08■□□□□ 0.65
CCDC88B-203ENST00000359902 DPY19L2P2Q6ZN68 376 aa19.08■□□□□ 0.65
CCDC88B-203ENST00000359902 GHSRQ92847 366 aa19.08■□□□□ 0.65
CCDC88B-203ENST00000359902 ZNF486Q96H40 463 aaPredicted RBP19.08■□□□□ 0.65
CCDC88B-203ENST00000359902 YIPF2Q9BWQ6 316 aa19.08■□□□□ 0.65
CCDC88B-203ENST00000359902 RNF121Q9H920 327 aa19.08■□□□□ 0.65
CCDC88B-203ENST00000359902 MAU2Q9Y6X3 613 aa19.08■□□□□ 0.65
CCDC88B-203ENST00000359902 PRUNE2Q8WUY3 3088 aa19.08■□□□□ 0.64
CCDC88B-203ENST00000359902 FITM1A5D6W6 292 aa19.08■□□□□ 0.64
CCDC88B-203ENST00000359902 TLCD2A6NGC4 264 aa19.08■□□□□ 0.64
CCDC88B-203ENST00000359902 C17orf105B2RV13 164 aa19.08■□□□□ 0.64
CCDC88B-203ENST00000359902 MYL9P24844 172 aa19.08■□□□□ 0.64
CCDC88B-203ENST00000359902 RPL4P36578 427 aaKnown RBP19.08■□□□□ 0.64
CCDC88B-203ENST00000359902 MAP2K3P46734 347 aa19.08■□□□□ 0.64
CCDC88B-203ENST00000359902 TP53I3Q53FA7 332 aa19.08■□□□□ 0.64
CCDC88B-203ENST00000359902 MED25Q71SY5 747 aa19.08■□□□□ 0.64
CCDC88B-203ENST00000359902 TRILQ7L0X0 811 aa19.08■□□□□ 0.64
CCDC88B-203ENST00000359902 TPRA1Q86W33 373 aa19.08■□□□□ 0.64
CCDC88B-203ENST00000359902 ENKURQ8TC29 256 aa19.08■□□□□ 0.64
CCDC88B-203ENST00000359902 ZNRF4Q8WWF5 429 aa19.08■□□□□ 0.64
CCDC88B-203ENST00000359902 DDOQ99489 341 aa19.08■□□□□ 0.64
CCDC88B-203ENST00000359902 TTTY10Q9BZA0 68 aa19.08■□□□□ 0.64
CCDC88B-203ENST00000359902 RBMX2Q9Y388 322 aaKnown RBP19.08■□□□□ 0.64
CCDC88B-203ENST00000359902 N6AMT1Q9Y5N5 214 aa19.08■□□□□ 0.64
CCDC88B-203ENST00000359902 CLCA3PQ9Y6N3 262 aa19.08■□□□□ 0.64
CCDC88B-203ENST00000359902 AGRPO00253 132 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 MAGEB4O15481 346 aaPredicted RBP19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 OR7A10O76100 309 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 OR2T7P0C7T2 308 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 DDOSTP39656 456 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 GGTLC2Q14390 218 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 GXYLT1Q4G148 440 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 ACSM3Q53FZ2 586 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 NPEPL1Q8NDH3 523 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 FAM71CQ8NEG0 241 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 OR2T27Q8NH04 317 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 PTPMT1Q8WUK0 201 aaPredicted RBP19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 KCTD12Q96CX2 325 aaKnown RBP19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 FRMD6Q96NE9 622 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 KCNJ15Q99712 375 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 PELOQ9BRX2 385 aaKnown RBP19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 CYSLTR2Q9NS75 346 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 EXTL2Q9UBQ6 330 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 ZNF337Q9Y3M9 751 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 CACNA1IQ9P0X4 2223 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 IGKV1D-42A0A075B6H8 117 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 A0A0B4J293 547 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 A0A0G2JK05 382 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 DEFB133Q30KQ1 61 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 FNDC7Q5VTL7 733 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 NKAIN2Q5VXU1 208 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 SFXN4Q6P4A7 337 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 ZNF440Q8IYI8 595 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 MS4A15Q8N5U1 240 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 ZNF321PQ8N8H1 164 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 GATSQ8NAP1 163 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 POMGNT2Q8NAT1 580 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 OR7G1Q8NGA0 311 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 RNF31Q96EP0 1072 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 ZC3HAV1LQ96H79 300 aaKnown RBP19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 NMNAT3Q96T66 252 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 CNN2Q99439 309 aaKnown RBP19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 NRIP3Q9NQ35 241 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 ENAMQ9NRM1 1142 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 LANCL2Q9NS86 450 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 RBFOX1Q9NWB1 397 aaKnown RBP19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 RASD1Q9Y272 281 aa19.07■□□□□ 0.64
CCDC88B-203ENST00000359902 PCDH15Q96QU1 1955 aa19.06■□□□□ 0.64
CCDC88B-203ENST00000359902 OGG1O15527 345 aa19.06■□□□□ 0.64
CCDC88B-203ENST00000359902 TRAPPC2P0DI81 140 aa19.06■□□□□ 0.64
CCDC88B-203ENST00000359902 TRAPPC2BP0DI82 140 aa19.06■□□□□ 0.64
CCDC88B-203ENST00000359902 CD226Q15762 336 aa19.06■□□□□ 0.64
CCDC88B-203ENST00000359902 IL20RBQ6UXL0 311 aa19.06■□□□□ 0.64
CCDC88B-203ENST00000359902 TEX19Q8NA77 164 aa19.06■□□□□ 0.64
CCDC88B-203ENST00000359902 OR13C5Q8NGS8 318 aa19.06■□□□□ 0.64
CCDC88B-203ENST00000359902 PELI1Q96FA3 418 aa19.06■□□□□ 0.64
CCDC88B-203ENST00000359902 SLX1AQ9BQ83 275 aa19.06■□□□□ 0.64
CCDC88B-203ENST00000359902 CHRNA10Q9GZZ6 450 aa19.06■□□□□ 0.64
CCDC88B-203ENST00000359902 GMEB2Q9UKD1 530 aa19.06■□□□□ 0.64
CCDC88B-203ENST00000359902 A0A0G2JMP0 313 aa19.06■□□□□ 0.64
CCDC88B-203ENST00000359902 A0A0X1KG70 313 aa19.06■□□□□ 0.64
CCDC88B-203ENST00000359902 IMPA2O14732 288 aa19.06■□□□□ 0.64
CCDC88B-203ENST00000359902 ARPC3O15145 178 aa19.06■□□□□ 0.64
CCDC88B-203ENST00000359902 OIP5O43482 229 aa19.06■□□□□ 0.64
CCDC88B-203ENST00000359902 NAA10P41227 235 aaPredicted RBP19.06■□□□□ 0.64
CCDC88B-203ENST00000359902 DIO1P49895 249 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms