RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 MEPEQ9NQ76 525 aaPredicted RBP12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 C20orf141Q9NUB4 165 aa12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 TEKT2Q9UIF3 430 aa12.59□□□□□ -0.39
PDLIM5-203ENST00000359265 C17orf51A8MQB3 221 aa12.58□□□□□ -0.4
PDLIM5-203ENST00000359265 HCN1O60741 890 aa12.58□□□□□ -0.4
PDLIM5-203ENST00000359265 RCBTB2O95199 551 aa12.58□□□□□ -0.4
PDLIM5-203ENST00000359265 IGF2P01344 180 aa12.58□□□□□ -0.4
PDLIM5-203ENST00000359265 CCDC159P0C7I6 412 aa12.58□□□□□ -0.4
PDLIM5-203ENST00000359265 SAGP10523 405 aaPredicted RBP12.58□□□□□ -0.4
PDLIM5-203ENST00000359265 CXCR1P25024 350 aa12.58□□□□□ -0.4
PDLIM5-203ENST00000359265 MST1P26927 711 aa12.58□□□□□ -0.4
PDLIM5-203ENST00000359265 ZNF41P51814 821 aaPredicted RBP12.58□□□□□ -0.4
PDLIM5-203ENST00000359265 CXCR4P61073 352 aa12.58□□□□□ -0.4
PDLIM5-203ENST00000359265 CDK5R2Q13319 367 aa12.58□□□□□ -0.4
PDLIM5-203ENST00000359265 GINS1Q14691 196 aa12.58□□□□□ -0.4
PDLIM5-203ENST00000359265 ACER2Q5QJU3 275 aa12.58□□□□□ -0.4
PDLIM5-203ENST00000359265 PRAMEF20Q5VT98 475 aa12.58□□□□□ -0.4
PDLIM5-203ENST00000359265 TMEM236Q5W0B7 351 aa12.58□□□□□ -0.4
PDLIM5-203ENST00000359265 SLC22A10Q63ZE4 541 aa12.58□□□□□ -0.4
PDLIM5-203ENST00000359265 B3GNTL1Q67FW5 361 aaPredicted RBP12.58□□□□□ -0.4
PDLIM5-203ENST00000359265 BICRALQ6AI39 1079 aa12.58□□□□□ -0.4
PDLIM5-203ENST00000359265 SLC27A4Q6P1M0 643 aa12.58□□□□□ -0.4
PDLIM5-203ENST00000359265 P3H2Q8IVL5 708 aa12.58□□□□□ -0.4
PDLIM5-203ENST00000359265 ENTHD1Q8IYW4 607 aa12.58□□□□□ -0.4
PDLIM5-203ENST00000359265 SLC43A2Q8N370 569 aa12.58□□□□□ -0.4
PDLIM5-203ENST00000359265 OR52L1Q8NGH7 329 aa12.58□□□□□ -0.4
PDLIM5-203ENST00000359265 CNIH3Q8TBE1 160 aa12.58□□□□□ -0.4
PDLIM5-203ENST00000359265 PAQR8Q8TEZ7 354 aa12.58□□□□□ -0.4
PDLIM5-203ENST00000359265 ZNF566Q969W8 418 aa12.58□□□□□ -0.4
PDLIM5-203ENST00000359265 SGCZQ96LD1 299 aa12.58□□□□□ -0.4
PDLIM5-203ENST00000359265 EGLN3Q9H6Z9 239 aa12.58□□□□□ -0.4
PDLIM5-203ENST00000359265 RASSF1Q9NS23 344 aa12.58□□□□□ -0.4
PDLIM5-203ENST00000359265 IL20Q9NYY1 176 aa12.58□□□□□ -0.4
PDLIM5-203ENST00000359265 RNF6Q9Y252 685 aa12.58□□□□□ -0.4
PDLIM5-203ENST00000359265 IGKV1D-42A0A075B6H8 117 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 C2orf72A6NCS6 295 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 SLC1A7O00341 560 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 CDC42EP2O14613 210 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 SLC25A12O75746 678 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 IGFBP1P08833 259 aaPredicted RBP12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 SMIM18P0DKX4 95 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 BMP7P18075 431 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 ITGA3P26006 1051 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 CASRP41180 1078 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 GIPRP48546 466 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 SLC9A3P48764 834 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 HLCSP50747 726 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 GABARAPL2P60520 117 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 CDK5Q00535 292 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 APOFQ13790 326 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 TOMM34Q15785 309 aaPredicted RBP12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 ABHD17BQ5VST6 288 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 C5orf46Q6UWT4 87 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 PTCHD4Q6ZW05 846 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 CYP4Z2PQ8N1L4 340 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 BEST3Q8N1M1 668 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 IQCF1Q8N6M8 205 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 TSPAN14Q8NG11 270 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 OR2M3Q8NG83 312 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 OR4K17Q8NGC6 315 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 OR13C2Q8NGS9 318 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 PSMF1Q92530 271 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 SLC38A2Q96QD8 506 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 KLHDC3Q9BQ90 382 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 TSSK6Q9BXA6 273 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 ANGPTL4Q9BY76 406 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 PLA2G12AQ9BZM1 189 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 LHPPQ9H008 270 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 OR52D1Q9H346 318 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 PTGES2Q9H7Z7 377 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 SH2D2AQ9NP31 389 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 BATF3Q9NR55 127 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 SCN3BQ9NY72 215 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 MED11Q9P086 117 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 OSGIN1Q9UJX0 560 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 POLHQ9Y253 713 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 RELNP78509 3460 aa12.57□□□□□ -0.4
PDLIM5-203ENST00000359265 DOPEY1Q5JWR5 2465 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 A0A087WXM4 84 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 TMED7-TICAM2A0A0A6YYA0 188 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 ANKRD33BA6NCL7 494 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 TRIM64A6NGJ6 449 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 SNPHO15079 494 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 KLK10O43240 276 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 SUSD5O60279 629 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 FAM20BO75063 409 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 SMNDC1O75940 238 aaKnown RBP eCLIP12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 OR7A10O76100 309 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 P04436 131 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 CCL3P10147 92 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 PRKCAP17252 672 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 CRHBPP24387 322 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 EEF1B2P24534 225 aaKnown RBP12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 FMO3P31513 532 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 DLX5P56178 289 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 CSNK2BP67870 215 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 CDC20Q12834 499 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 PGGHGQ32M88 737 aa12.56□□□□□ -0.4
PDLIM5-203ENST00000359265 ZBED5Q49AG3 693 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms