RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 TRAPPC2LQ9UL33 140 aa17.16■□□□□ 0.34
SHANK1-202ENST00000359082 KIR2DS5A0A0G2JLQ3 304 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 A0A0G2JNG1 304 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 KIR2DS3K7RE56 304 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 TIMM8AO60220 97 aaPredicted RBP17.15■□□□□ 0.34
SHANK1-202ENST00000359082 SLC43A1O75387 559 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 MRPL33O75394 65 aaKnown RBP17.15■□□□□ 0.34
SHANK1-202ENST00000359082 KIR2DS5Q14953 304 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 SLC10A1Q14973 349 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 CLMPQ9H6B4 373 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 ACP2P11117 423 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 AFF3P51826 1226 aaKnown RBP17.15■□□□□ 0.34
SHANK1-202ENST00000359082 MRPS10P82664 201 aaKnown RBP17.15■□□□□ 0.34
SHANK1-202ENST00000359082 EMX1Q04741 257 aaPredicted RBP17.15■□□□□ 0.34
SHANK1-202ENST00000359082 GDPGP1Q6ZNW5 385 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 OR7G1Q8NGA0 311 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 SRPK3Q9UPE1 567 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 METTL15A6NJ78 407 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 HOXD12P35452 270 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 LYPD4Q6UWN0 246 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 FCRLAQ7L513 359 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 RLN3Q8WXF3 142 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 SGPP1Q9BX95 441 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 COPS3Q9UNS2 423 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 MYH8P13535 1937 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 MEIOCA2RUB1 952 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 TXNL1O43396 289 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 DPM1O60762 260 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 UBBP0CG47 229 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 UBCP0CG48 685 aaKnown RBP17.15■□□□□ 0.34
SHANK1-202ENST00000359082 RPS27AP62979 156 aaKnown RBP17.15■□□□□ 0.34
SHANK1-202ENST00000359082 UBA52P62987 128 aaKnown RBP17.15■□□□□ 0.34
SHANK1-202ENST00000359082 TGFBR3Q03167 851 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 SLC16A14Q7RTX9 510 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 ZFP82Q8N141 532 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 BPIFB2Q8N4F0 458 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 ACOT11Q8WXI4 607 aaPredicted RBP17.15■□□□□ 0.34
SHANK1-202ENST00000359082 MICU1Q9BPX6 476 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 NTMT1Q9BV86 223 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 CNTNAP3Q9BZ76 1288 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 HIPK2Q9H2X6 1198 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 TAAR2Q9P1P5 351 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 FBXO24O75426 580 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 PTHP01270 115 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 C1SP09871 688 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 NUDT7P0C024 238 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 CD6P30203 668 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 SLC35F3Q8IY50 421 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 ADGRG5Q8IZF4 528 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 GORASP2Q9H8Y8 452 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 PISDQ9UG56 409 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 RAB39BQ96DA2 213 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 BSCL2Q96G97 398 aaPredicted RBP17.15■□□□□ 0.34
SHANK1-202ENST00000359082 TXN2Q99757 166 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 HEBP1Q9NRV9 189 aa17.15■□□□□ 0.34
SHANK1-202ENST00000359082 SIDT1Q9NXL6 827 aaKnown RBP17.15■□□□□ 0.34
SHANK1-202ENST00000359082 ZNF593O00488 134 aaPredicted RBP17.14■□□□□ 0.33
SHANK1-202ENST00000359082 MRPL38Q96DV4 380 aaKnown RBP17.14■□□□□ 0.33
SHANK1-202ENST00000359082 HRASLSQ9HDD0 168 aa17.14■□□□□ 0.33
SHANK1-202ENST00000359082 FOXE1O00358 373 aaPredicted RBP17.14■□□□□ 0.33
SHANK1-202ENST00000359082 ZFAND5O76080 213 aa17.14■□□□□ 0.33
SHANK1-202ENST00000359082 IVDP26440 423 aa17.14■□□□□ 0.33
SHANK1-202ENST00000359082 IKZF1Q13422 519 aa17.14■□□□□ 0.33
SHANK1-202ENST00000359082 CAMK2DQ13557 499 aa17.14■□□□□ 0.33
SHANK1-202ENST00000359082 SELPLGQ14242 412 aa17.14■□□□□ 0.33
SHANK1-202ENST00000359082 HNF4GQ14541 408 aa17.14■□□□□ 0.33
SHANK1-202ENST00000359082 ASB17Q8WXJ9 295 aa17.14■□□□□ 0.33
SHANK1-202ENST00000359082 TCTN2Q96GX1 697 aa17.14■□□□□ 0.33
SHANK1-202ENST00000359082 DUSP23Q9BVJ7 150 aa17.14■□□□□ 0.33
SHANK1-202ENST00000359082 RCE1Q9Y256 329 aa17.14■□□□□ 0.33
SHANK1-202ENST00000359082 TRBV4-1A0A0J9YWV2 114 aa17.14■□□□□ 0.33
SHANK1-202ENST00000359082 PPP6CO00743 305 aa17.14■□□□□ 0.33
SHANK1-202ENST00000359082 GPR137BO60478 399 aa17.14■□□□□ 0.33
SHANK1-202ENST00000359082 GM2AP17900 193 aa17.14■□□□□ 0.33
SHANK1-202ENST00000359082 CTBSQ01459 385 aa17.14■□□□□ 0.33
SHANK1-202ENST00000359082 SPCS2Q15005 226 aa17.14■□□□□ 0.33
SHANK1-202ENST00000359082 MRPL2Q5T653 305 aaKnown RBP17.14■□□□□ 0.33
SHANK1-202ENST00000359082 TCEAL8Q8IYN2 117 aa17.14■□□□□ 0.33
SHANK1-202ENST00000359082 MMP21Q8N119 569 aa17.14■□□□□ 0.33
SHANK1-202ENST00000359082 PITHD1Q9GZP4 211 aaPredicted RBP17.14■□□□□ 0.33
SHANK1-202ENST00000359082 WWTR1Q9GZV5 400 aa17.14■□□□□ 0.33
SHANK1-202ENST00000359082 UBQLN4Q9NRR5 601 aa17.14■□□□□ 0.33
SHANK1-202ENST00000359082 RGPD8O14715 1765 aaPredicted RBP17.14■□□□□ 0.33
SHANK1-202ENST00000359082 OR6C65A6NJZ3 312 aa17.14■□□□□ 0.33
SHANK1-202ENST00000359082 TRA2BP62995 288 aaKnown RBP17.14■□□□□ 0.33
SHANK1-202ENST00000359082 HNRNPA1L2Q32P51 320 aaKnown RBP17.14■□□□□ 0.33
SHANK1-202ENST00000359082 ZNF684Q5T5D7 378 aa17.14■□□□□ 0.33
SHANK1-202ENST00000359082 DCBLD2Q96PD2 775 aa17.14■□□□□ 0.33
SHANK1-202ENST00000359082 FBXO7Q9Y3I1 522 aa17.14■□□□□ 0.33
SHANK1-202ENST00000359082 CER1O95813 267 aa17.14■□□□□ 0.33
SHANK1-202ENST00000359082 RBMXL1Q96E39 390 aaKnown RBP17.14■□□□□ 0.33
SHANK1-202ENST00000359082 CDCA3Q99618 268 aaPredicted RBP17.14■□□□□ 0.33
SHANK1-202ENST00000359082 INPP5EQ9NRR6 644 aa17.14■□□□□ 0.33
SHANK1-202ENST00000359082 BABAM2Q9NXR7 383 aa17.14■□□□□ 0.33
SHANK1-202ENST00000359082 ZNF281Q9Y2X9 895 aa17.14■□□□□ 0.33
SHANK1-202ENST00000359082 DRGXA6NNA5 263 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 SCGB1D1O95968 90 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 TAS2R46P59540 309 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 BAXQ07812 192 aa17.13■□□□□ 0.33
SHANK1-202ENST00000359082 MPEG1Q2M385 716 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms