RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 RGS10O43665 173 aa11.62□□□□□ -0.55
GGPS1-202ENST00000358966 TLX2O43763 284 aaPredicted RBP11.62□□□□□ -0.55
GGPS1-202ENST00000358966 DDAH2O95865 285 aa11.62□□□□□ -0.55
GGPS1-202ENST00000358966 RPL35P42766 123 aaKnown RBP11.62□□□□□ -0.55
GGPS1-202ENST00000358966 AKR1D1P51857 326 aa11.62□□□□□ -0.55
GGPS1-202ENST00000358966 GABARAPL2P60520 117 aa11.62□□□□□ -0.55
GGPS1-202ENST00000358966 GPR50Q13585 617 aa11.62□□□□□ -0.55
GGPS1-202ENST00000358966 C1orf94Q6P1W5 598 aa11.62□□□□□ -0.55
GGPS1-202ENST00000358966 APOOLQ6UXV4 268 aa11.62□□□□□ -0.55
GGPS1-202ENST00000358966 NEDD4LQ96PU5 975 aa11.62□□□□□ -0.55
GGPS1-202ENST00000358966 NUDT9Q9BW91 350 aa11.62□□□□□ -0.55
GGPS1-202ENST00000358966 CCDC59Q9P031 241 aaKnown RBP11.62□□□□□ -0.55
GGPS1-202ENST00000358966 RPH3AQ9Y2J0 694 aaPredicted RBP11.62□□□□□ -0.55
GGPS1-202ENST00000358966 TPRKBQ9Y3C4 175 aa11.62□□□□□ -0.55
GGPS1-202ENST00000358966 R4GN57 208 aa11.62□□□□□ -0.55
GGPS1-202ENST00000358966 LRRN3E7EW58 273 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 DSCR3O14972 297 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 SCRG1O75711 98 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 THBS1P07996 1170 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 SMIM11AP58511 58 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 ILKQ13418 452 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 CD226Q15762 336 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 BTBD16Q32M84 506 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 FAM199XQ6PEV8 388 aaPredicted RBP11.61□□□□□ -0.55
GGPS1-202ENST00000358966 NRARPQ7Z6K4 114 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 STT3BQ8TCJ2 826 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 SLC7A6Q92536 515 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 DNAJB12Q9NXW2 375 aaKnown RBP11.61□□□□□ -0.55
GGPS1-202ENST00000358966 SEMA5BQ9P283 1151 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 KLF2Q9Y5W3 355 aaPredicted RBP11.61□□□□□ -0.55
GGPS1-202ENST00000358966 HSPE1-MOB4S4R3N1 261 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 RIF1Q5UIP0 2472 aaKnown RBP11.61□□□□□ -0.55
GGPS1-202ENST00000358966 ST8SIA5O15466 376 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 SLC2A10O95528 541 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 NGFRP08138 427 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 ERP29P30040 261 aaKnown RBP11.61□□□□□ -0.55
GGPS1-202ENST00000358966 CCR4P51679 360 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 ST3GAL4Q11206 333 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 Q3ZCU0 254 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 GXYLT1Q4G148 440 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 ZCCHC12Q6PEW1 402 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 CBLN3Q6UW01 205 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 HSDL2Q6YN16 418 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 DBX2Q6ZNG2 339 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 PLCZ1Q86YW0 608 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 C9orf40Q8IXQ3 194 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 ZNF721Q8TF20 911 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 HOXB13Q92826 284 aaPredicted RBP11.61□□□□□ -0.55
GGPS1-202ENST00000358966 C8orf44Q96CB5 159 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 ADOQ96SZ5 270 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 ACOT13Q9NPJ3 140 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 RXFP3Q9NSD7 469 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 PSORS1C1Q9UIG5 152 aa11.61□□□□□ -0.55
GGPS1-202ENST00000358966 LINC00862A6NCI5 91 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 CCL4P13236 92 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 ZNF28P17035 718 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 MAKP20794 623 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 FCRLBQ6BAA4 426 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 B3GLCTQ6Y288 498 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 CREB3L2Q70SY1 520 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 SHFQ7M4L6 423 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 RANBP3LQ86VV4 465 aaPredicted RBP11.6□□□□□ -0.55
GGPS1-202ENST00000358966 PARP16Q8N5Y8 322 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 OR5M3Q8NGP4 307 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 ACOT11Q8WXI4 607 aaPredicted RBP11.6□□□□□ -0.55
GGPS1-202ENST00000358966 ST8SIA4Q92187 359 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 PHF21AQ96BD5 680 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 BCL2L14Q9BZR8 327 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 C6orf62Q9GZU0 229 aaPredicted RBP11.6□□□□□ -0.55
GGPS1-202ENST00000358966 SLC23A1Q9UHI7 598 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 TINAGQ9UJW2 476 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 COPS3Q9UNS2 423 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 HRH3Q9Y5N1 445 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 TCRBV16S1A1N1A0A5B0 115 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 MEIOCA2RUB1 952 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 RAB19A4D1S5 217 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 FAM86C2PA6NEL3 165 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 F8W036 122 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 NUPL2O15504 423 aaKnown RBP11.6□□□□□ -0.55
GGPS1-202ENST00000358966 WISP1O95388 367 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 PTHP01270 115 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 ACAA2P42765 397 aaKnown RBP11.6□□□□□ -0.55
GGPS1-202ENST00000358966 GIPRP48546 466 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 SERTAD2Q14140 314 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 EIPR1Q53HC9 387 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 ZBTB37Q5TC79 503 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 SMARCD3Q6STE5 483 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 CASP12Q6UXS9 341 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 RAB43Q86YS6 212 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 ADAMTS18Q8TE60 1221 aa11.6□□□□□ -0.55
GGPS1-202ENST00000358966 RPL3LQ92901 407 aaKnown RBP11.6□□□□□ -0.55
GGPS1-202ENST00000358966 ZC3H10Q96K80 434 aaKnown RBP11.6□□□□□ -0.55
GGPS1-202ENST00000358966 TRIM45Q9H8W5 580 aaPredicted RBP11.6□□□□□ -0.55
GGPS1-202ENST00000358966 MEPEQ9NQ76 525 aaPredicted RBP11.6□□□□□ -0.55
GGPS1-202ENST00000358966 TRAV27A0A087WT01 109 aa11.59□□□□□ -0.55
GGPS1-202ENST00000358966 A0A1B0GWA3 101 aa11.59□□□□□ -0.55
GGPS1-202ENST00000358966 PMS2P1A4D2B8 440 aa11.59□□□□□ -0.55
GGPS1-202ENST00000358966 CLCA1A8K7I4 914 aa11.59□□□□□ -0.55
GGPS1-202ENST00000358966 TFECO14948 347 aaPredicted RBP11.59□□□□□ -0.55
GGPS1-202ENST00000358966 LYPD3O95274 346 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms