RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 BBS4Q96RK4 519 aa11.17□□□□□ -0.62
SMARCAL1-201ENST00000357276 NKX6-2Q9C056 277 aaPredicted RBP11.17□□□□□ -0.62
SMARCAL1-201ENST00000357276 CLDND1Q9NY35 253 aa11.17□□□□□ -0.62
SMARCAL1-201ENST00000357276 SIGLEC7Q9Y286 467 aa11.17□□□□□ -0.62
SMARCAL1-201ENST00000357276 FAM86C2PA6NEL3 165 aa11.17□□□□□ -0.62
SMARCAL1-201ENST00000357276 PYCARD-AS1I3L0S3 204 aa11.17□□□□□ -0.62
SMARCAL1-201ENST00000357276 LCMT2O60294 686 aaKnown RBP11.17□□□□□ -0.62
SMARCAL1-201ENST00000357276 CLEC3AO75596 197 aa11.17□□□□□ -0.62
SMARCAL1-201ENST00000357276 CDC123O75794 336 aaPredicted RBP11.17□□□□□ -0.62
SMARCAL1-201ENST00000357276 CLUP10909 449 aa11.17□□□□□ -0.62
SMARCAL1-201ENST00000357276 SRMP19623 302 aa11.17□□□□□ -0.62
SMARCAL1-201ENST00000357276 PDX1P52945 283 aa11.17□□□□□ -0.62
SMARCAL1-201ENST00000357276 PUS10Q3MIT2 529 aaKnown RBP11.17□□□□□ -0.62
SMARCAL1-201ENST00000357276 PWWP2BQ6NUJ5 590 aa11.17□□□□□ -0.62
SMARCAL1-201ENST00000357276 GAREM2Q75VX8 874 aa11.17□□□□□ -0.62
SMARCAL1-201ENST00000357276 TRAPPC5Q8IUR0 188 aa11.17□□□□□ -0.62
SMARCAL1-201ENST00000357276 DCUN1D3Q8IWE4 304 aa11.17□□□□□ -0.62
SMARCAL1-201ENST00000357276 HDDC3Q8N4P3 179 aa11.17□□□□□ -0.62
SMARCAL1-201ENST00000357276 ARMC5Q96C12 935 aa11.17□□□□□ -0.62
SMARCAL1-201ENST00000357276 DEFB118Q96PH6 123 aa11.17□□□□□ -0.62
SMARCAL1-201ENST00000357276 SEMA4CQ9C0C4 833 aa11.17□□□□□ -0.62
SMARCAL1-201ENST00000357276 GPR34Q9UPC5 381 aa11.17□□□□□ -0.62
SMARCAL1-201ENST00000357276 BRCA2P51587 3418 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 A0A1W2PR48 441 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 A0A1W2PS29 197 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 C4orf51C9J302 202 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 SPINT1O43278 529 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 PRAMEF2O60811 474 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 ZNF254O75437 659 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 ELFN1P0C7U0 828 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 EEF1A1P68104 462 aaKnown RBP11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 PRR5P85299 388 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 ILF3Q12906 894 aaKnown RBP eCLIP11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 FAAP20Q6NZ36 180 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 ZNF836Q6ZNA1 936 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 TCEAL8Q8IYN2 117 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 HMGB4Q8WW32 186 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 MRGPRX3Q96LB0 322 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 CYB5R1Q9UHQ9 305 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 FBXL4Q9UKA2 621 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 INSL5Q9Y5Q6 135 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 PQLC2LA1A4F0 135 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 H7BY64 318 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 K7ESM1 405 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 NRG2O14511 850 aaPredicted RBP11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 ADAM11O75078 769 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 KHDRBS3O75525 346 aaKnown RBP11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 POP7O75817 140 aaKnown RBP11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 SIX6O95475 246 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 RAB40ALP0C0E4 278 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 SIRPAP78324 504 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 ZIC1Q15915 447 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 TCTN1Q2MV58 587 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 DCAF12L2Q5VW00 463 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 TMEM215Q68D42 235 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 RPL22L1Q6P5R6 122 aaKnown RBP11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 CCDC116Q8IYX3 515 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 OR2AK2Q8NG84 335 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 PFN4Q8NHR9 129 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 RAB40AQ8WXH6 277 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 HAVCR1Q96D42 359 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 SLC35A4Q96G79 324 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 ZNF681Q96N22 645 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 PRAP1Q96NZ9 151 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 PBX4Q9BYU1 374 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 SPG21Q9NZD8 308 aa11.16□□□□□ -0.62
SMARCAL1-201ENST00000357276 TMEM272A0A1B0GTI8 110 aa11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 GLOD5A6NK44 160 aa11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 F5H5P2 479 aa11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 ACOT7O00154 380 aa11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 RCBTB2O95199 551 aa11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 ZNF35P13682 527 aa11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 PRG2P13727 222 aa11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 BMP7P18075 431 aa11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 HTR2AP28223 471 aa11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 EPHB3P54753 998 aa11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 RPS15P62841 145 aaKnown RBP11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 GGTLC2Q14390 218 aa11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 LSRQ86X29 649 aaPredicted RBP11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 NUP43Q8NFH3 380 aa11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 HERVK_113Q902F9 699 aa11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 ZNF514Q96K75 400 aaPredicted RBP11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 MRI1Q9BV20 369 aa11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 PCBD2Q9H0N5 130 aa11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 RNF208Q9H0X6 261 aa11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 OR51V1Q9H2C8 321 aa11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 ESRP2Q9H6T0 727 aaKnown RBP11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 SLC39A1Q9NY26 324 aa11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 TAS2R10Q9NYW0 307 aa11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 ASF1AQ9Y294 204 aa11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 PCYT1BQ9Y5K3 369 aaPredicted RBP11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 PSMB5P28074 263 aa11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 CSNK1G2P78368 415 aa11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 CBFBQ13951 182 aa11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 RAB33AQ14088 237 aa11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 MICBQ29980 383 aa11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 TP53I3Q53FA7 332 aa11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 FCRLAQ7L513 359 aa11.15□□□□□ -0.62
SMARCAL1-201ENST00000357276 IGSF21Q96ID5 467 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms