RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 FOXF1Q12946 379 aa16.45■□□□□ 0.22
SMARCD3-202ENST00000356800 OR4K17Q8NGC6 315 aa16.45■□□□□ 0.22
SMARCD3-202ENST00000356800 POC1BQ8TC44 478 aa16.45■□□□□ 0.22
SMARCD3-202ENST00000356800 APH1BQ8WW43 257 aa16.45■□□□□ 0.22
SMARCD3-202ENST00000356800 TRUB1Q8WWH5 349 aaKnown RBP16.45■□□□□ 0.22
SMARCD3-202ENST00000356800 TMEM234Q8WY98 164 aa16.45■□□□□ 0.22
SMARCD3-202ENST00000356800 C1GALT1C1Q96EU7 318 aa16.45■□□□□ 0.22
SMARCD3-202ENST00000356800 ADNPQ9H2P0 1102 aa16.45■□□□□ 0.22
SMARCD3-202ENST00000356800 SLC25A19Q9HC21 320 aa16.45■□□□□ 0.22
SMARCD3-202ENST00000356800 HHATLQ9HCP6 504 aa16.45■□□□□ 0.22
SMARCD3-202ENST00000356800 RASSF1Q9NS23 344 aa16.45■□□□□ 0.22
SMARCD3-202ENST00000356800 IMPAD1Q9NX62 359 aa16.45■□□□□ 0.22
SMARCD3-202ENST00000356800 TMED7Q9Y3B3 224 aa16.45■□□□□ 0.22
SMARCD3-202ENST00000356800 HTR3EA5X5Y0 456 aa16.44■□□□□ 0.22
SMARCD3-202ENST00000356800 A6NHS1 94 aa16.44■□□□□ 0.22
SMARCD3-202ENST00000356800 UNC119BA6NIH7 251 aa16.44■□□□□ 0.22
SMARCD3-202ENST00000356800 SHISA8B8ZZ34 492 aa16.44■□□□□ 0.22
SMARCD3-202ENST00000356800 LRRN3E7EW58 273 aa16.44■□□□□ 0.22
SMARCD3-202ENST00000356800 SLC1A7O00341 560 aa16.44■□□□□ 0.22
SMARCD3-202ENST00000356800 SNX4O95219 450 aa16.44■□□□□ 0.22
SMARCD3-202ENST00000356800 IGF2P01344 180 aa16.44■□□□□ 0.22
SMARCD3-202ENST00000356800 CXCR1P25024 350 aa16.44■□□□□ 0.22
SMARCD3-202ENST00000356800 CASRP41180 1078 aa16.44■□□□□ 0.22
SMARCD3-202ENST00000356800 CCL11P51671 97 aa16.44■□□□□ 0.22
SMARCD3-202ENST00000356800 ZNF41P51814 821 aaPredicted RBP16.44■□□□□ 0.22
SMARCD3-202ENST00000356800 GABARAPL2P60520 117 aa16.44■□□□□ 0.22
SMARCD3-202ENST00000356800 OR1C1Q15619 314 aa16.44■□□□□ 0.22
SMARCD3-202ENST00000356800 SLC25A53Q5H9E4 307 aa16.44■□□□□ 0.22
SMARCD3-202ENST00000356800 TIGD3Q6B0B8 471 aa16.44■□□□□ 0.22
SMARCD3-202ENST00000356800 ZNF620Q6ZNG0 422 aa16.44■□□□□ 0.22
SMARCD3-202ENST00000356800 OR8D4Q8NGM9 314 aa16.44■□□□□ 0.22
SMARCD3-202ENST00000356800 OR13C2Q8NGS9 318 aa16.44■□□□□ 0.22
SMARCD3-202ENST00000356800 OSTF1Q92882 214 aa16.44■□□□□ 0.22
SMARCD3-202ENST00000356800 GNRHR2Q96P88 292 aa16.44■□□□□ 0.22
SMARCD3-202ENST00000356800 ZNF226Q9NYT6 803 aa16.44■□□□□ 0.22
SMARCD3-202ENST00000356800 TMEM72A0PK05 275 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 ZC3H12DA2A288 527 aaKnown RBP16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 SUSD5O60279 629 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 TFAP2AP05549 437 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 ATP6V1B1P15313 513 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 HTR3AP46098 478 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 SMSP52788 366 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 FXYD6P3P58550 94 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 GPR85P60893 370 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 FOXK1P85037 733 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 MFAP5Q13361 173 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 FHL1Q13642 323 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 SLC46A3Q7Z3Q1 461 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 FDCSPQ8NFU4 85 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 OR1J4Q8NGS1 313 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 TEX47Q8TBZ9 253 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 KTI12Q96EK9 354 aaPredicted RBP16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 HES7Q9BYE0 225 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 TIMMDC1Q9NPL8 285 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 KCNMB2Q9Y691 235 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 CDH10Q9Y6N8 788 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 PINLYPA6NC86 204 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 LRRC3CA6NJW4 275 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 EFCAB9A8MZ26 197 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 EFNA2O43921 213 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 SLC25A12O75746 678 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 SMNDC1O75940 238 aaKnown RBP eCLIP16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 CNR1P21554 472 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 RPL5P46777 297 aaKnown RBP16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 MASP1P48740 699 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 CDH15P55291 814 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 SNRPGP62308 76 aaKnown RBP16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 GINS1Q14691 196 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 C1QL3Q5VWW1 255 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 RPL13AP3Q6NVV1 102 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 SLC27A4Q6P1M0 643 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 CCDC103Q8IW40 242 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 LRRC17Q8N6Y2 441 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 MDS2Q8NDY4 140 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 BPIFB6Q8NFQ5 453 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 SGTBQ96EQ0 304 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 JSRP1Q96MG2 331 aaPredicted RBP16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 PTGES2Q9H7Z7 377 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 PCDHGB6Q9Y5F9 930 aa16.43■□□□□ 0.22
SMARCD3-202ENST00000356800 DPPA5A6NC42 116 aa16.42■□□□□ 0.22
SMARCD3-202ENST00000356800 NPIPB7O75200 414 aa16.42■□□□□ 0.22
SMARCD3-202ENST00000356800 PTP4A3O75365 173 aa16.42■□□□□ 0.22
SMARCD3-202ENST00000356800 CH25HO95992 272 aa16.42■□□□□ 0.22
SMARCD3-202ENST00000356800 SAGP10523 405 aaPredicted RBP16.42■□□□□ 0.22
SMARCD3-202ENST00000356800 IL11P20809 199 aa16.42■□□□□ 0.22
SMARCD3-202ENST00000356800 TCEA1P23193 301 aaKnown RBP16.42■□□□□ 0.22
SMARCD3-202ENST00000356800 FMO3P31513 532 aa16.42■□□□□ 0.22
SMARCD3-202ENST00000356800 LTBQ06643 244 aa16.42■□□□□ 0.22
SMARCD3-202ENST00000356800 ZNF773Q6PK81 442 aa16.42■□□□□ 0.22
SMARCD3-202ENST00000356800 CASP12Q6UXS9 341 aa16.42■□□□□ 0.22
SMARCD3-202ENST00000356800 PTCHD4Q6ZW05 846 aa16.42■□□□□ 0.22
SMARCD3-202ENST00000356800 IQCF1Q8N6M8 205 aa16.42■□□□□ 0.22
SMARCD3-202ENST00000356800 OR8J1Q8NGP2 316 aa16.42■□□□□ 0.22
SMARCD3-202ENST00000356800 SLC39A7Q92504 469 aa16.42■□□□□ 0.22
SMARCD3-202ENST00000356800 TAAR8Q969N4 342 aa16.42■□□□□ 0.22
SMARCD3-202ENST00000356800 MRGPRX4Q96LA9 322 aa16.42■□□□□ 0.22
SMARCD3-202ENST00000356800 MOGAT1Q96PD6 335 aa16.42■□□□□ 0.22
SMARCD3-202ENST00000356800 ENKD1Q9H0I2 346 aa16.42■□□□□ 0.22
SMARCD3-202ENST00000356800 PLCXD1Q9NUJ7 323 aa16.42■□□□□ 0.22
SMARCD3-202ENST00000356800 DKK4Q9UBT3 224 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms