RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 LNX2Q8N448 690 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 ZNF707Q96C28 371 aaPredicted RBP9.35□□□□□ -0.91
PTPRA-203ENST00000356147 GFI1Q99684 422 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 CMC2Q9NRP2 79 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 CAMK2AQ9UQM7 478 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 SIGLEC7Q9Y286 467 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 FKBP7Q9Y680 259 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 TRAPPC13A5PLN9 417 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 IGF2P01344 180 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 PRNPP04156 253 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 GAAP10253 952 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 ACRP10323 421 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 NDUFS1P28331 727 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 MAT2AP31153 395 aaKnown RBP9.35□□□□□ -0.91
PTPRA-203ENST00000356147 FNTBP49356 437 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 RPS11P62280 158 aaKnown RBP eCLIP9.35□□□□□ -0.91
PTPRA-203ENST00000356147 BDH1Q02338 343 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 SLC22A10Q63ZE4 541 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 GRASPQ7Z6J2 395 aaPredicted RBP9.35□□□□□ -0.91
PTPRA-203ENST00000356147 SLITRK4Q8IW52 837 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 ZPLD1Q8TCW7 415 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 BRIX1Q8TDN6 353 aaKnown RBP9.35□□□□□ -0.91
PTPRA-203ENST00000356147 SLC25A38Q96DW6 304 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 SDF2Q99470 211 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 LIN7BQ9HAP6 207 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 CACYBPQ9HB71 228 aaKnown RBP9.35□□□□□ -0.91
PTPRA-203ENST00000356147 ANKRD10Q9NXR5 420 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 COPZ2Q9P299 210 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 GPR160Q9UJ42 338 aa9.35□□□□□ -0.91
PTPRA-203ENST00000356147 ZNF223Q9UK11 482 aaPredicted RBP9.35□□□□□ -0.91
PTPRA-203ENST00000356147 LRRC72A6NJI9 287 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 VEGFDO43915 354 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 ADAM11O75078 769 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 ATP1B1P05026 303 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 ZNF888P0CJ79 500 aaPredicted RBP9.34□□□□□ -0.91
PTPRA-203ENST00000356147 ERGP11308 486 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 HIST1H1CP16403 213 aaKnown RBP9.34□□□□□ -0.91
PTPRA-203ENST00000356147 NT5EP21589 574 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 NFYAP23511 347 aaPredicted RBP9.34□□□□□ -0.91
PTPRA-203ENST00000356147 RPS27P42677 84 aaKnown RBP9.34□□□□□ -0.91
PTPRA-203ENST00000356147 ERVK-21P61565 698 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 FAM74A1Q5RGS3 127 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 FAM122CQ6P4D5 195 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 FAM199XQ6PEV8 388 aaPredicted RBP9.34□□□□□ -0.91
PTPRA-203ENST00000356147 MTSS1LQ765P7 747 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 GJD3Q8N144 294 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 OR2L5Q8NG80 312 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 OR52H1Q8NGJ2 320 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 OR52E1Q8NGJ3 308 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 SYNPRQ8TBG9 265 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 MARC2Q969Z3 335 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 KCNK15Q9H427 330 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 INSL6Q9Y581 213 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 PCDHGA9Q9Y5G4 932 aaKnown RBP9.34□□□□□ -0.91
PTPRA-203ENST00000356147 STON1Q9Y6Q2 735 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 PLSCR5A0PG75 271 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 MFSD2BA6NFX1 497 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 MCRIP1C9JLW8 97 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 PYCARD-AS1I3L0S3 204 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 TOR1AO14656 332 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 SUSD5O60279 629 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 UGT2B7P16662 529 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 P2RY2P41231 377 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 ERVFC1P60507 584 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 HLXQ14774 488 aaPredicted RBP9.34□□□□□ -0.91
PTPRA-203ENST00000356147 MRM1Q6IN84 353 aaKnown RBP9.34□□□□□ -0.91
PTPRA-203ENST00000356147 RANBP3LQ86VV4 465 aaPredicted RBP9.34□□□□□ -0.91
PTPRA-203ENST00000356147 TOR1AIP2Q8NFQ8 470 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 OR4E2Q8NGC2 313 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 SFXN5Q8TD22 340 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 OR8D1Q8WZ84 308 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 MTHFD2LQ9H903 347 aaPredicted RBP9.34□□□□□ -0.91
PTPRA-203ENST00000356147 PRDM9Q9NQV7 894 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 C2orf42Q9NWW7 574 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 TAS2R10Q9NYW0 307 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 ADAM29Q9UKF5 820 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 SLC35A3Q9Y2D2 325 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 NPFFR2Q9Y5X5 522 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 ARID1AO14497 2285 aa9.34□□□□□ -0.91
PTPRA-203ENST00000356147 GXYLT2A0PJZ3 443 aa9.34□□□□□ -0.92
PTPRA-203ENST00000356147 PRKNO60260 465 aaPredicted RBP9.34□□□□□ -0.92
PTPRA-203ENST00000356147 NGFRP08138 427 aa9.34□□□□□ -0.92
PTPRA-203ENST00000356147 ZNF35P13682 527 aa9.34□□□□□ -0.92
PTPRA-203ENST00000356147 ZNF3P17036 446 aa9.34□□□□□ -0.92
PTPRA-203ENST00000356147 GALP22466 123 aa9.34□□□□□ -0.92
PTPRA-203ENST00000356147 RAB28P51157 221 aa9.34□□□□□ -0.92
PTPRA-203ENST00000356147 STX4Q12846 297 aa9.34□□□□□ -0.92
PTPRA-203ENST00000356147 CDK5R1Q15078 307 aa9.34□□□□□ -0.92
PTPRA-203ENST00000356147 NDUFAF6Q330K2 333 aa9.34□□□□□ -0.92
PTPRA-203ENST00000356147 TMEM69Q5SWH9 247 aa9.34□□□□□ -0.92
PTPRA-203ENST00000356147 DCAF12L2Q5VW00 463 aa9.34□□□□□ -0.92
PTPRA-203ENST00000356147 ASPGQ86U10 573 aa9.34□□□□□ -0.92
PTPRA-203ENST00000356147 OR4D10Q8NGI6 311 aa9.34□□□□□ -0.92
PTPRA-203ENST00000356147 STK35Q8TDR2 534 aa9.34□□□□□ -0.92
PTPRA-203ENST00000356147 ZDHHC1Q8WTX9 485 aa9.34□□□□□ -0.92
PTPRA-203ENST00000356147 TSSK2Q96PF2 358 aa9.34□□□□□ -0.92
PTPRA-203ENST00000356147 AIFM2Q9BRQ8 373 aa9.34□□□□□ -0.92
PTPRA-203ENST00000356147 RABL2BQ9UNT1 228 aa9.34□□□□□ -0.92
PTPRA-203ENST00000356147 MED31Q9Y3C7 131 aa9.34□□□□□ -0.92
PTPRA-203ENST00000356147 OR6C74A6NCV1 312 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms