RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 TVP23AA6NH52 213 aa12.58□□□□□ -0.4
TRIM4-203ENST00000355947 FAM74A7A6NL05 159 aa12.58□□□□□ -0.4
TRIM4-203ENST00000355947 KCNAB3O43448 404 aa12.58□□□□□ -0.4
TRIM4-203ENST00000355947 ZIC2O95409 532 aaPredicted RBP12.58□□□□□ -0.4
TRIM4-203ENST00000355947 OR8G3PP0DMU2 310 aa12.58□□□□□ -0.4
TRIM4-203ENST00000355947 F3P13726 295 aa12.58□□□□□ -0.4
TRIM4-203ENST00000355947 GTF2F2P13984 249 aa12.58□□□□□ -0.4
TRIM4-203ENST00000355947 FAM74A3Q4VXF1 159 aa12.58□□□□□ -0.4
TRIM4-203ENST00000355947 ADGRG3Q86Y34 549 aa12.58□□□□□ -0.4
TRIM4-203ENST00000355947 ZFP82Q8N141 532 aa12.58□□□□□ -0.4
TRIM4-203ENST00000355947 NXPE3Q969Y0 559 aa12.58□□□□□ -0.4
TRIM4-203ENST00000355947 S100A16Q96FQ6 103 aaKnown RBP12.58□□□□□ -0.4
TRIM4-203ENST00000355947 TOE1Q96GM8 510 aaKnown RBP12.58□□□□□ -0.4
TRIM4-203ENST00000355947 LMF1Q96S06 567 aa12.58□□□□□ -0.4
TRIM4-203ENST00000355947 NMNAT3Q96T66 252 aa12.58□□□□□ -0.4
TRIM4-203ENST00000355947 ZNF471Q9BX82 626 aaPredicted RBP12.58□□□□□ -0.4
TRIM4-203ENST00000355947 SLC39A1Q9NY26 324 aa12.58□□□□□ -0.4
TRIM4-203ENST00000355947 DPP7Q9UHL4 492 aa12.58□□□□□ -0.4
TRIM4-203ENST00000355947 ING1Q9UK53 422 aaPredicted RBP12.58□□□□□ -0.4
TRIM4-203ENST00000355947 PCDHGA5Q9Y5G8 931 aa12.58□□□□□ -0.4
TRIM4-203ENST00000355947 SNRNP200O75643 2136 aaKnown RBP12.58□□□□□ -0.4
TRIM4-203ENST00000355947 TRPM7Q96QT4 1865 aa12.57□□□□□ -0.4
TRIM4-203ENST00000355947 ATP1B1P05026 303 aa12.57□□□□□ -0.4
TRIM4-203ENST00000355947 S100A11P31949 105 aa12.57□□□□□ -0.4
TRIM4-203ENST00000355947 TAF13Q15543 124 aa12.57□□□□□ -0.4
TRIM4-203ENST00000355947 C2orf68Q2NKX9 166 aa12.57□□□□□ -0.4
TRIM4-203ENST00000355947 TMUB2Q71RG4 321 aa12.57□□□□□ -0.4
TRIM4-203ENST00000355947 OR2L2Q8NH16 312 aa12.57□□□□□ -0.4
TRIM4-203ENST00000355947 C2CD4CQ8TF44 421 aa12.57□□□□□ -0.4
TRIM4-203ENST00000355947 CPNE2Q96FN4 548 aaPredicted RBP12.57□□□□□ -0.4
TRIM4-203ENST00000355947 ISYNA1Q9NPH2 558 aa12.57□□□□□ -0.4
TRIM4-203ENST00000355947 CPNE7Q9UBL6 633 aa12.57□□□□□ -0.4
TRIM4-203ENST00000355947 PPIL1Q9Y3C6 166 aa12.57□□□□□ -0.4
TRIM4-203ENST00000355947 KCNMB2Q9Y691 235 aa12.57□□□□□ -0.4
TRIM4-203ENST00000355947 SPEGQ15772 3267 aa12.57□□□□□ -0.4
TRIM4-203ENST00000355947 CEP290O15078 2479 aa12.57□□□□□ -0.4
TRIM4-203ENST00000355947 DNAJB6O75190 326 aa12.57□□□□□ -0.4
TRIM4-203ENST00000355947 RCBTB2O95199 551 aa12.57□□□□□ -0.4
TRIM4-203ENST00000355947 ANXA2P07355 339 aaKnown RBP12.57□□□□□ -0.4
TRIM4-203ENST00000355947 NMBP08949 121 aa12.57□□□□□ -0.4
TRIM4-203ENST00000355947 ITPKBP27987 946 aa12.57□□□□□ -0.4
TRIM4-203ENST00000355947 GABRA3P34903 492 aa12.57□□□□□ -0.4
TRIM4-203ENST00000355947 ZNF85Q03923 595 aa12.57□□□□□ -0.4
TRIM4-203ENST00000355947 HLXQ14774 488 aaPredicted RBP12.57□□□□□ -0.4
TRIM4-203ENST00000355947 ZNF169Q14929 603 aaPredicted RBP12.57□□□□□ -0.4
TRIM4-203ENST00000355947 TMEM44Q2T9K0 475 aa12.57□□□□□ -0.4
TRIM4-203ENST00000355947 GSG1LQ6UXU4 331 aa12.57□□□□□ -0.4
TRIM4-203ENST00000355947 FAM219AQ8IW50 185 aa12.57□□□□□ -0.4
TRIM4-203ENST00000355947 TCEAL8Q8IYN2 117 aa12.57□□□□□ -0.4
TRIM4-203ENST00000355947 LRRC46Q96FV0 321 aa12.57□□□□□ -0.4
TRIM4-203ENST00000355947 INSM2Q96T92 566 aaPredicted RBP12.57□□□□□ -0.4
TRIM4-203ENST00000355947 OR52A5Q9H2C5 316 aa12.57□□□□□ -0.4
TRIM4-203ENST00000355947 LYARQ9NX58 379 aaKnown RBP12.57□□□□□ -0.4
TRIM4-203ENST00000355947 SAGE1Q9NXZ1 904 aa12.57□□□□□ -0.4
TRIM4-203ENST00000355947 CLDND1Q9NY35 253 aa12.57□□□□□ -0.4
TRIM4-203ENST00000355947 LATS1O95835 1130 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 IGHA1P01876 353 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 RPN2P04844 631 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 CPMP14384 443 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 CDK2P24941 298 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 VASPP50552 380 aaPredicted RBP12.56□□□□□ -0.4
TRIM4-203ENST00000355947 NKPD1Q17RQ9 610 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 RNLSQ5VYX0 342 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 GPAT4Q86UL3 456 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 C12orf40Q86WS4 652 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 KLHL15Q96M94 604 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 PTDSS2Q9BVG9 487 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 PLEKHA6Q9Y2H5 1048 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 A0A0G2JK05 382 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 TRAPPC13A5PLN9 417 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 KHNYNO15037 678 aaKnown RBP12.56□□□□□ -0.4
TRIM4-203ENST00000355947 SLC31A1O15431 190 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 SDC3O75056 442 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 HLA-DQA2P01906 255 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 RLN2P04090 185 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 NAGAP17050 411 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 MPP7Q5T2T1 576 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 DCAF12L2Q5VW00 463 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 CD300LDQ6UXZ3 194 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 TMEM185AQ8NFB2 350 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 OR10K1Q8NGX5 313 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 BRIX1Q8TDN6 353 aaKnown RBP12.56□□□□□ -0.4
TRIM4-203ENST00000355947 PELI1Q96FA3 418 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 ZNF416Q9BWM5 594 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 ACTRT3Q9BYD9 372 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 TMEM27Q9HBJ8 222 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 SLC6A20Q9NP91 592 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 CAMK2AQ9UQM7 478 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 PCDHGA9Q9Y5G4 932 aaKnown RBP12.56□□□□□ -0.4
TRIM4-203ENST00000355947 TCF20Q9UGU0 1960 aaKnown RBP12.56□□□□□ -0.4
TRIM4-203ENST00000355947 TRAV18A0A075B6X5 111 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 ZNF888P0CJ79 500 aaPredicted RBP12.56□□□□□ -0.4
TRIM4-203ENST00000355947 ADRB3P13945 408 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 SNRPNP63162 240 aaKnown RBP12.56□□□□□ -0.4
TRIM4-203ENST00000355947 SIRPAP78324 504 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 EFNB1P98172 346 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 MC2RQ01718 297 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 FZD5Q13467 585 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 DECR1Q16698 335 aa12.56□□□□□ -0.4
TRIM4-203ENST00000355947 ZNF627Q7L945 461 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms