RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 DIRAS1O95057 198 aa16.04■□□□□ 0.16
PDLIM7-202ENST00000355841 LYPD3O95274 346 aa16.04■□□□□ 0.16
PDLIM7-202ENST00000355841 TGM6O95932 706 aa16.04■□□□□ 0.16
PDLIM7-202ENST00000355841 KLK2P20151 261 aa16.04■□□□□ 0.16
PDLIM7-202ENST00000355841 RPS3AP61247 264 aaKnown RBP16.04■□□□□ 0.16
PDLIM7-202ENST00000355841 VLDLRP98155 873 aa16.04■□□□□ 0.16
PDLIM7-202ENST00000355841 EGR4Q05215 589 aa16.04■□□□□ 0.16
PDLIM7-202ENST00000355841 GDF7Q7Z4P5 450 aa16.04■□□□□ 0.16
PDLIM7-202ENST00000355841 ADGRE4PQ86SQ3 457 aa16.04■□□□□ 0.16
PDLIM7-202ENST00000355841 FNDC9Q8TBE3 224 aa16.04■□□□□ 0.16
PDLIM7-202ENST00000355841 SLC25A43Q8WUT9 341 aaPredicted RBP16.04■□□□□ 0.16
PDLIM7-202ENST00000355841 SLC38A4Q969I6 547 aa16.04■□□□□ 0.16
PDLIM7-202ENST00000355841 SLC47A1Q96FL8 570 aa16.04■□□□□ 0.16
PDLIM7-202ENST00000355841 SLC41A3Q96GZ6 507 aa16.04■□□□□ 0.16
PDLIM7-202ENST00000355841 C7orf34Q96L11 122 aa16.04■□□□□ 0.16
PDLIM7-202ENST00000355841 LRGUKQ96M69 825 aa16.04■□□□□ 0.16
PDLIM7-202ENST00000355841 DMRTA2Q96SC8 542 aa16.04■□□□□ 0.16
PDLIM7-202ENST00000355841 VKORC1Q9BQB6 163 aa16.04■□□□□ 0.16
PDLIM7-202ENST00000355841 A4GNTQ9UNA3 340 aa16.04■□□□□ 0.16
PDLIM7-202ENST00000355841 COL12A1Q99715 3063 aa16.03■□□□□ 0.16
PDLIM7-202ENST00000355841 HELZ2Q9BYK8 2649 aaKnown RBP16.03■□□□□ 0.16
PDLIM7-202ENST00000355841 IGKV1D-42A0A075B6H8 117 aa16.03■□□□□ 0.16
PDLIM7-202ENST00000355841 IGHV3-15A0A0B4J1V0 119 aa16.03■□□□□ 0.16
PDLIM7-202ENST00000355841 FFAR1O14842 300 aa16.03■□□□□ 0.16
PDLIM7-202ENST00000355841 ZNF208O43345 1280 aa16.03■□□□□ 0.16
PDLIM7-202ENST00000355841 TOXO94900 526 aa16.03■□□□□ 0.16
PDLIM7-202ENST00000355841 MT-ND1P03886 318 aa16.03■□□□□ 0.16
PDLIM7-202ENST00000355841 GLI4P10075 376 aa16.03■□□□□ 0.16
PDLIM7-202ENST00000355841 DIO1P49895 249 aa16.03■□□□□ 0.16
PDLIM7-202ENST00000355841 NUP107P57740 925 aa16.03■□□□□ 0.16
PDLIM7-202ENST00000355841 SRSF1Q07955 248 aaKnown RBP eCLIP16.03■□□□□ 0.16
PDLIM7-202ENST00000355841 TRAP1Q12931 704 aaKnown RBP16.03■□□□□ 0.16
PDLIM7-202ENST00000355841 FLOT2Q14254 428 aa16.03■□□□□ 0.16
PDLIM7-202ENST00000355841 MYO7BQ6PIF6 2116 aa16.03■□□□□ 0.16
PDLIM7-202ENST00000355841 C9orf106Q8NAJ2 232 aa16.03■□□□□ 0.16
PDLIM7-202ENST00000355841 ROBO4Q8WZ75 1007 aa16.03■□□□□ 0.16
PDLIM7-202ENST00000355841 UTP4Q969X6 686 aaKnown RBP16.03■□□□□ 0.16
PDLIM7-202ENST00000355841 DDIT4LQ96D03 193 aa16.03■□□□□ 0.16
PDLIM7-202ENST00000355841 CCDC120Q96HB5 630 aa16.03■□□□□ 0.16
PDLIM7-202ENST00000355841 NDUFAF4Q9P032 175 aa16.03■□□□□ 0.16
PDLIM7-202ENST00000355841 RIMS3Q9UJD0 308 aa16.03■□□□□ 0.16
PDLIM7-202ENST00000355841 A0A087WUJ7 227 aa16.02■□□□□ 0.16
PDLIM7-202ENST00000355841 A0A1B0GUH1 482 aa16.02■□□□□ 0.16
PDLIM7-202ENST00000355841 SLC22A20A6NK97 555 aa16.02■□□□□ 0.16
PDLIM7-202ENST00000355841 A8MVM7 634 aa16.02■□□□□ 0.16
PDLIM7-202ENST00000355841 SULT2B1O00204 365 aa16.02■□□□□ 0.16
PDLIM7-202ENST00000355841 AQP8O94778 261 aa16.02■□□□□ 0.16
PDLIM7-202ENST00000355841 SEMG1P04279 462 aa16.02■□□□□ 0.16
PDLIM7-202ENST00000355841 PNMTP11086 282 aa16.02■□□□□ 0.16
PDLIM7-202ENST00000355841 IMPDH2P12268 514 aa16.02■□□□□ 0.16
PDLIM7-202ENST00000355841 PTGER4P35408 488 aa16.02■□□□□ 0.16
PDLIM7-202ENST00000355841 NSUN5P2Q63ZY6 315 aa16.02■□□□□ 0.16
PDLIM7-202ENST00000355841 TMPPEQ6ZT21 453 aa16.02■□□□□ 0.16
PDLIM7-202ENST00000355841 NKAIN4Q8IVV8 208 aa16.02■□□□□ 0.16
PDLIM7-202ENST00000355841 KTI12Q96EK9 354 aaPredicted RBP16.02■□□□□ 0.16
PDLIM7-202ENST00000355841 CLCF1Q9UBD9 225 aa16.02■□□□□ 0.16
PDLIM7-202ENST00000355841 SLC5A6Q9Y289 635 aa16.02■□□□□ 0.16
PDLIM7-202ENST00000355841 ENPP4Q9Y6X5 453 aa16.02■□□□□ 0.16
PDLIM7-202ENST00000355841 CHP2O43745 196 aa16.02■□□□□ 0.15
PDLIM7-202ENST00000355841 STAMBPO95630 424 aa16.02■□□□□ 0.15
PDLIM7-202ENST00000355841 ENPP1P22413 925 aa16.02■□□□□ 0.15
PDLIM7-202ENST00000355841 RPS5P46782 204 aaKnown RBP16.02■□□□□ 0.15
PDLIM7-202ENST00000355841 PDSS1Q5T2R2 415 aa16.02■□□□□ 0.15
PDLIM7-202ENST00000355841 C1orf140Q5VVS0 124 aa16.02■□□□□ 0.15
PDLIM7-202ENST00000355841 PRRC1Q96M27 445 aa16.02■□□□□ 0.15
PDLIM7-202ENST00000355841 UCN2Q96RP3 112 aa16.02■□□□□ 0.15
PDLIM7-202ENST00000355841 PRSS27Q9BQR3 290 aa16.02■□□□□ 0.15
PDLIM7-202ENST00000355841 CALHM2Q9HA72 323 aa16.02■□□□□ 0.15
PDLIM7-202ENST00000355841 C12orf10Q9HB07 376 aa16.02■□□□□ 0.15
PDLIM7-202ENST00000355841 GCN1Q92616 2671 aaKnown RBP16.01■□□□□ 0.15
PDLIM7-202ENST00000355841 CD8B2A6NJW9 211 aa16.01■□□□□ 0.15
PDLIM7-202ENST00000355841 ANKRD65E5RJM6 399 aa16.01■□□□□ 0.15
PDLIM7-202ENST00000355841 KPNA4O00629 521 aaPredicted RBP16.01■□□□□ 0.15
PDLIM7-202ENST00000355841 ZG16O60844 167 aa16.01■□□□□ 0.15
PDLIM7-202ENST00000355841 NPIPB7O75200 414 aa16.01■□□□□ 0.15
PDLIM7-202ENST00000355841 OR5F1O95221 314 aa16.01■□□□□ 0.15
PDLIM7-202ENST00000355841 HOXD4P09016 255 aaPredicted RBP16.01■□□□□ 0.15
PDLIM7-202ENST00000355841 OR2B6P58173 313 aa16.01■□□□□ 0.15
PDLIM7-202ENST00000355841 ADORA2A-AS1P86434 159 aa16.01■□□□□ 0.15
PDLIM7-202ENST00000355841 OR7A5Q15622 319 aa16.01■□□□□ 0.15
PDLIM7-202ENST00000355841 IQCCQ4KMZ1 466 aa16.01■□□□□ 0.15
PDLIM7-202ENST00000355841 MTX3Q5HYI7 312 aa16.01■□□□□ 0.15
PDLIM7-202ENST00000355841 SWT1Q5T5J6 900 aaKnown RBP16.01■□□□□ 0.15
PDLIM7-202ENST00000355841 SPATA24Q86W54 205 aa16.01■□□□□ 0.15
PDLIM7-202ENST00000355841 CCDC71Q8IV32 467 aaPredicted RBP16.01■□□□□ 0.15
PDLIM7-202ENST00000355841 GCNT2Q8N0V5 402 aa16.01■□□□□ 0.15
PDLIM7-202ENST00000355841 NAXEQ8NCW5 288 aa16.01■□□□□ 0.15
PDLIM7-202ENST00000355841 TMEM255BQ8WV15 326 aa16.01■□□□□ 0.15
PDLIM7-202ENST00000355841 FNDC11Q9BVV2 318 aa16.01■□□□□ 0.15
PDLIM7-202ENST00000355841 MMADHCQ9H3L0 296 aaPredicted RBP16.01■□□□□ 0.15
PDLIM7-202ENST00000355841 HDGFL3Q9Y3E1 203 aa16.01■□□□□ 0.15
PDLIM7-202ENST00000355841 PRSS23O95084 383 aa16■□□□□ 0.15
PDLIM7-202ENST00000355841 SYNGR4O95473 234 aa16■□□□□ 0.15
PDLIM7-202ENST00000355841 RNF224P0DH78 156 aa16■□□□□ 0.15
PDLIM7-202ENST00000355841 FPR1P21462 350 aa16■□□□□ 0.15
PDLIM7-202ENST00000355841 CBLP22681 906 aa16■□□□□ 0.15
PDLIM7-202ENST00000355841 MAP2K6P52564 334 aa16■□□□□ 0.15
PDLIM7-202ENST00000355841 RAC3P60763 192 aa16■□□□□ 0.15
PDLIM7-202ENST00000355841 LSM11P83369 360 aaKnown RBP eCLIP16■□□□□ 0.15
PDLIM7-202ENST00000355841 SF3B4Q15427 424 aaKnown RBP eCLIP16■□□□□ 0.155e-7■■■□□ 19.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms