RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 PRSS55Q6UWB4 352 aaPredicted RBP13.15□□□□□ -0.3
RLIM-202ENST00000349225 WDR88Q6ZMY6 472 aa13.15□□□□□ -0.3
RLIM-202ENST00000349225 NUDT18Q6ZVK8 323 aa13.15□□□□□ -0.3
RLIM-202ENST00000349225 CYB561A3Q8NBI2 242 aa13.15□□□□□ -0.3
RLIM-202ENST00000349225 PHOSPHO1Q8TCT1 267 aa13.15□□□□□ -0.3
RLIM-202ENST00000349225 ZNF251Q9BRH9 671 aa13.15□□□□□ -0.3
RLIM-202ENST00000349225 ZNF337Q9Y3M9 751 aa13.15□□□□□ -0.3
RLIM-202ENST00000349225 RFPL4AA6NLU0 287 aa13.15□□□□□ -0.3
RLIM-202ENST00000349225 RFPL4AL1F8VTS6 287 aa13.15□□□□□ -0.3
RLIM-202ENST00000349225 IGHV2-70P01814 119 aa13.15□□□□□ -0.3
RLIM-202ENST00000349225 UBBP0CG47 229 aa13.15□□□□□ -0.3
RLIM-202ENST00000349225 UBCP0CG48 685 aaKnown RBP13.15□□□□□ -0.3
RLIM-202ENST00000349225 MAKP20794 623 aa13.15□□□□□ -0.3
RLIM-202ENST00000349225 SLC2A5P22732 501 aa13.15□□□□□ -0.3
RLIM-202ENST00000349225 RPS27AP62979 156 aaKnown RBP13.15□□□□□ -0.3
RLIM-202ENST00000349225 UBA52P62987 128 aaKnown RBP13.15□□□□□ -0.3
RLIM-202ENST00000349225 SNTB1Q13884 538 aaKnown RBP13.15□□□□□ -0.3
RLIM-202ENST00000349225 FAM109BQ6ICB4 259 aaPredicted RBP13.15□□□□□ -0.3
RLIM-202ENST00000349225 PWWP2BQ6NUJ5 590 aa13.15□□□□□ -0.3
RLIM-202ENST00000349225 MBOAT2Q6ZWT7 520 aa13.15□□□□□ -0.3
RLIM-202ENST00000349225 SUN3Q8TAQ9 357 aa13.15□□□□□ -0.3
RLIM-202ENST00000349225 PELI1Q96FA3 418 aa13.15□□□□□ -0.3
RLIM-202ENST00000349225 AMDHD1Q96NU7 426 aa13.15□□□□□ -0.3
RLIM-202ENST00000349225 SUV39H2Q9H5I1 410 aa13.15□□□□□ -0.3
RLIM-202ENST00000349225 SLC22A7Q9Y694 548 aa13.15□□□□□ -0.3
RLIM-202ENST00000349225 A0A0G2JPF8 293 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 GLOD5A6NK44 160 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 IFITM5A6NNB3 132 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 HNRNPCL3B7ZW38 293 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 H0YC42 278 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 HMGN2P05204 90 aaKnown RBP13.14□□□□□ -0.31
RLIM-202ENST00000349225 HNRNPCL4P0DMR1 293 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 TEAD1P28347 426 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 PPP2R1BP30154 601 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 MPIP34949 423 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 CLDN2P57739 230 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 AP3S2P59780 193 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 ZNF658BQ4V348 819 aaPredicted RBP13.14□□□□□ -0.31
RLIM-202ENST00000349225 OR4C16Q8NGL9 310 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 SYNPRQ8TBG9 265 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 FAM83CQ9BQN1 747 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 NOX4Q9NPH5 578 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 STARD7Q9NQZ5 370 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 OR5V1Q9UGF6 321 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 DYRK1BQ9Y463 629 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 KIAA0355O15063 1070 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 PPP1R3DO95685 299 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 USP50Q70EL3 339 aaPredicted RBP13.14□□□□□ -0.31
RLIM-202ENST00000349225 ZNF546Q86UE3 836 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 TMEM173Q86WV6 379 aaPredicted RBP13.14□□□□□ -0.31
RLIM-202ENST00000349225 FAM129CQ86XR2 697 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 ARMC10Q8N2F6 343 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 PFN4Q8NHR9 129 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 THAP6Q8TBB0 222 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 ARSGQ96EG1 525 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 CACYBPQ9HB71 228 aaKnown RBP13.14□□□□□ -0.31
RLIM-202ENST00000349225 C14orf105Q9NVL8 296 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 MIOXQ9UGB7 285 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 MKL2Q9ULH7 1088 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 PLAGL1Q9UM63 463 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 ACOD1A6NK06 481 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 POP7O75817 140 aaKnown RBP13.14□□□□□ -0.31
RLIM-202ENST00000349225 RLN1P04808 185 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 RPL17P18621 184 aaKnown RBP13.14□□□□□ -0.31
RLIM-202ENST00000349225 PTAFRP25105 342 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 PNLIPRP2P54317 469 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 LMAN2Q12907 356 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 ARSIQ5FYB1 569 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 AVPI1Q5T686 147 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 TMEM71Q6P5X7 295 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 OVCH1Q7RTY7 1134 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 LINC01599Q8WXQ3 324 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 SMIM19Q96E16 107 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 AP5M1Q9H0R1 490 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 PIGMQ9H3S5 423 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 TMEM185BQ9H7F4 350 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 NRIP3Q9NQ35 241 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 SLC7A7Q9UM01 511 aa13.14□□□□□ -0.31
RLIM-202ENST00000349225 SMAD9O15198 467 aaKnown RBP13.13□□□□□ -0.31
RLIM-202ENST00000349225 OGG1O15527 345 aa13.13□□□□□ -0.31
RLIM-202ENST00000349225 FCMRO60667 390 aa13.13□□□□□ -0.31
RLIM-202ENST00000349225 TBX19O60806 448 aa13.13□□□□□ -0.31
RLIM-202ENST00000349225 SRMP19623 302 aa13.13□□□□□ -0.31
RLIM-202ENST00000349225 STARP49675 285 aa13.13□□□□□ -0.31
RLIM-202ENST00000349225 CDK5R1Q15078 307 aa13.13□□□□□ -0.31
RLIM-202ENST00000349225 TMEM69Q5SWH9 247 aa13.13□□□□□ -0.31
RLIM-202ENST00000349225 KHDRBS2Q5VWX1 349 aaKnown RBP13.13□□□□□ -0.31
RLIM-202ENST00000349225 UBE3DQ7Z6J8 389 aa13.13□□□□□ -0.31
RLIM-202ENST00000349225 SLC41A3Q96GZ6 507 aa13.13□□□□□ -0.31
RLIM-202ENST00000349225 SPSB2Q99619 263 aa13.13□□□□□ -0.31
RLIM-202ENST00000349225 RIOK2Q9BVS4 552 aaKnown RBP13.13□□□□□ -0.31
RLIM-202ENST00000349225 ZDHHC6Q9H6R6 413 aa13.13□□□□□ -0.31
RLIM-202ENST00000349225 MYOFQ9NZM1 2061 aa13.13□□□□□ -0.31
RLIM-202ENST00000349225 A0A1W2PPE3 182 aa13.13□□□□□ -0.31
RLIM-202ENST00000349225 KPNA3O00505 521 aaPredicted RBP13.13□□□□□ -0.31
RLIM-202ENST00000349225 ZNF806P0C7X5 589 aa13.13□□□□□ -0.31
RLIM-202ENST00000349225 SMIM6P0DI80 62 aa13.13□□□□□ -0.31
RLIM-202ENST00000349225 ECH1Q13011 328 aa13.13□□□□□ -0.31
RLIM-202ENST00000349225 DNM1P46Q6ZS02 220 aa13.13□□□□□ -0.31
RLIM-202ENST00000349225 CFAP206Q8IYR0 622 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms